Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:27:02 (3000): wrapper (7.7.26015): starting
23:27:02 (3000): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 23:27:02] Arguments: --nthreads 8
[2025-10-11 23:27:02] Threads: 8
[2025-10-11 23:27:02] Checking for CVMFS
[2025-10-11 23:27:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:27:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:27:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:27:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:27:03] 2.11.2.0 2876 205304 77032 151606 0 56 11340913 20275200 1 130560 3 72786486 99.977 10673993 9843 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 23:27:03] CVMFS is ok
[2025-10-11 23:27:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:27:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:27:03] Further information can be found at the LHC@home message board.
[2025-10-11 23:27:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:27:03] Checking for apptainer binary...
[2025-10-11 23:27:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:27:03] Running /usr/bin/apptainer --version
[2025-10-11 23:27:03] apptainer version 1.3.2-1.el7
[2025-10-11 23:27:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:27:04] c-204-5.aglt2.org
[2025-10-11 23:27:04] apptainer works
[2025-10-11 23:27:04] Set ATHENA_PROC_NUMBER=8
[2025-10-11 23:27:04] Set ATHENA_CORE_NUMBER=8
[2025-10-11 23:27:04] Starting ATLAS job with PandaID=6838988948
[2025-10-11 23:27:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:39:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:39:40] 2025-10-12 05:38:46,186 | INFO     | monitor loop #585: job 0:6838988948 is in state 'finished'
[2025-10-12 01:39:40] 2025-10-12 05:38:46,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 01:39:40] 2025-10-12 05:38:46,384 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 01:39:40] 2025-10-12 05:38:46,386 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1762.5
[2025-10-12 01:39:40] 2025-10-12 05:38:46,388 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838988948/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 01:39:40] 2025-10-12 05:38:46,389 | INFO     | extracted standard info from prmon json
[2025-10-12 01:39:40] 2025-10-12 05:38:46,389 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 01:39:40] 2025-10-12 05:38:46,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 01:39:40] 2025-10-12 05:38:46,389 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 01:39:40] 2025-10-12 05:38:46,390 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 01:39:40] 2025-10-12 05:38:46,392 | INFO     | fitting pss+swap vs Time
[2025-10-12 01:39:40] 2025-10-12 05:38:46,393 | INFO     | sum of square deviations: 665612480.0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,393 | INFO     | sum of deviations: -1154278966.0000029
[2025-10-12 01:39:40] 2025-10-12 05:38:46,394 | INFO     | mean x: 1760243576.0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,394 | INFO     | mean y: 2527449.80620155
[2025-10-12 01:39:40] 2025-10-12 05:38:46,394 | INFO     | -- intersect: 3055072580.5907497
[2025-10-12 01:39:40] 2025-10-12 05:38:46,394 | INFO     | intersect: 3055072580.5907497
[2025-10-12 01:39:40] 2025-10-12 05:38:46,394 | INFO     | chi2: 1.5501027566175014
[2025-10-12 01:39:40] 2025-10-12 05:38:46,395 | INFO     | sum of square deviations: 591173875.0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,395 | INFO     | sum of deviations: -745488228.499998
[2025-10-12 01:39:40] 2025-10-12 05:38:46,395 | INFO     | mean x: 1760243423.5
[2025-10-12 01:39:40] 2025-10-12 05:38:46,395 | INFO     | mean y: 2528287.7016129033
[2025-10-12 01:39:40] 2025-10-12 05:38:46,396 | INFO     | -- intersect: 2222248757.4429164
[2025-10-12 01:39:40] 2025-10-12 05:38:46,396 | INFO     | intersect: 2222248757.4429164
[2025-10-12 01:39:40] 2025-10-12 05:38:46,396 | INFO     | chi2: 1.5512406632887843
[2025-10-12 01:39:40] 2025-10-12 05:38:46,396 | INFO     | current chi2=1.5512406632887843 (change=-0.0734084670467863 %)
[2025-10-12 01:39:40] 2025-10-12 05:38:46,396 | INFO     | right removable region: 123
[2025-10-12 01:39:40] 2025-10-12 05:38:46,396 | INFO     | sum of square deviations: 591173875.0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,397 | INFO     | sum of deviations: -19736216757.000004
[2025-10-12 01:39:40] 2025-10-12 05:38:46,397 | INFO     | mean x: 1760243728.5
[2025-10-12 01:39:40] 2025-10-12 05:38:46,397 | INFO     | mean y: 2564821.7258064514
[2025-10-12 01:39:40] 2025-10-12 05:38:46,397 | INFO     | -- intersect: 58767935282.02544
[2025-10-12 01:39:40] 2025-10-12 05:38:46,397 | INFO     | intersect: 58767935282.02544
[2025-10-12 01:39:40] 2025-10-12 05:38:46,398 | INFO     | chi2: 0.13789426917896408
[2025-10-12 01:39:40] 2025-10-12 05:38:46,398 | INFO     | current chi2=0.13789426917896408 (change=91.10418528124774 %)
[2025-10-12 01:39:40] 2025-10-12 05:38:46,398 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,399 | INFO     | sum of deviations: -19269695772.0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,399 | INFO     | mean x: 1760243881.0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,399 | INFO     | mean y: 2563661.781512605
[2025-10-12 01:39:40] 2025-10-12 05:38:46,399 | INFO     | -- intersect: 64919656494.686356
[2025-10-12 01:39:40] 2025-10-12 05:38:46,399 | INFO     | intersect: 64919656494.686356
[2025-10-12 01:39:40] 2025-10-12 05:38:46,399 | INFO     | chi2: 0.11581385931388483
[2025-10-12 01:39:40] 2025-10-12 05:38:46,400 | INFO     | current chi2=0.11581385931388483 (change=16.01256527667768 %)
[2025-10-12 01:39:40] 2025-10-12 05:38:46,400 | INFO     | left removable region: 20
[2025-10-12 01:39:40] 2025-10-12 05:38:46,400 | INFO     | sum of square deviations: 338804492.0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,400 | INFO     | sum of deviations: -11430022131.999998
[2025-10-12 01:39:40] 2025-10-12 05:38:46,401 | INFO     | mean x: 1760244003.0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,401 | INFO     | mean y: 2548035.2621359224
[2025-10-12 01:39:40] 2025-10-12 05:38:46,401 | INFO     | -- intersect: 59386730910.884315
[2025-10-12 01:39:40] 2025-10-12 05:38:46,401 | INFO     | intersect: 59386730910.884315
[2025-10-12 01:39:40] 2025-10-12 05:38:46,401 | INFO     | chi2: 0.10142619670133245
[2025-10-12 01:39:40] 2025-10-12 05:38:46,401 | INFO     | -- intersect: 59386730910.884315
[2025-10-12 01:39:40] 2025-10-12 05:38:46,401 | INFO     | current memory leak: -33.74 B/s (using 103 data points, chi2=0.10)
[2025-10-12 01:39:40] 2025-10-12 05:38:46,402 | INFO     | could have reported an average CPU frequency of 1976 MHz (8 samples)
[2025-10-12 01:39:40] 2025-10-12 05:38:46,402 | INFO     | ..............................
[2025-10-12 01:39:40] 2025-10-12 05:38:46,402 | INFO     | . Timing measurements:
[2025-10-12 01:39:40] 2025-10-12 05:38:46,402 | INFO     | . get job = 0 s
[2025-10-12 01:39:40] 2025-10-12 05:38:46,402 | INFO     | . initial setup = 2 s
[2025-10-12 01:39:40] 2025-10-12 05:38:46,403 | INFO     | . payload setup = 8 s
[2025-10-12 01:39:40] 2025-10-12 05:38:46,403 | INFO     | . stage-in = 0 s
[2025-10-12 01:39:40] 2025-10-12 05:38:46,403 | INFO     | . payload execution = 7846 s
[2025-10-12 01:39:40] 2025-10-12 05:38:46,403 | INFO     | . stage-out = 0 s
[2025-10-12 01:39:40] 2025-10-12 05:38:46,403 | INFO     | . log creation = 0 s
[2025-10-12 01:39:40] 2025-10-12 05:38:46,403 | INFO     | ..............................
[2025-10-12 01:39:40] 2025-10-12 05:38:46,497 | INFO     | 
[2025-10-12 01:39:40] 2025-10-12 05:38:46,498 | INFO     | job summary report
[2025-10-12 01:39:40] 2025-10-12 05:38:46,498 | INFO     | --------------------------------------------------
[2025-10-12 01:39:40] 2025-10-12 05:38:46,498 | INFO     | PanDA job id: 6838988948
[2025-10-12 01:39:40] 2025-10-12 05:38:46,498 | INFO     | task id: 46676269
[2025-10-12 01:39:40] 2025-10-12 05:38:46,498 | INFO     | errors: (none)
[2025-10-12 01:39:40] 2025-10-12 05:38:46,499 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:39:40] 2025-10-12 05:38:46,499 | INFO     | pilot state: finished 
[2025-10-12 01:39:40] 2025-10-12 05:38:46,499 | INFO     | transexitcode: 0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,499 | INFO     | exeerrorcode: 0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,499 | INFO     | exeerrordiag: 
[2025-10-12 01:39:40] 2025-10-12 05:38:46,499 | INFO     | exitcode: 0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,500 | INFO     | exitmsg: OK
[2025-10-12 01:39:40] 2025-10-12 05:38:46,500 | INFO     | cpuconsumptiontime: 55943 s
[2025-10-12 01:39:40] 2025-10-12 05:38:46,500 | INFO     | nevents: 400
[2025-10-12 01:39:40] 2025-10-12 05:38:46,500 | INFO     | neventsw: 0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,500 | INFO     | pid: 13111
[2025-10-12 01:39:40] 2025-10-12 05:38:46,500 | INFO     | pgrp: 13111
[2025-10-12 01:39:40] 2025-10-12 05:38:46,501 | INFO     | corecount: 8
[2025-10-12 01:39:40] 2025-10-12 05:38:46,501 | INFO     | event service: False
[2025-10-12 01:39:40] 2025-10-12 05:38:46,501 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 7859: 2376804, 7860: 2385858, 7869: 2385996}
[2025-10-12 01:39:40] 2025-10-12 05:38:46,501 | INFO     | --------------------------------------------------
[2025-10-12 01:39:40] 2025-10-12 05:38:46,501 | INFO     | 
[2025-10-12 01:39:40] 2025-10-12 05:38:46,502 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 01:39:40] 2025-10-12 05:38:46,529 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,529 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,529 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,530 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,530 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,530 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,530 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,532 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,532 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:39:40] 2025-10-12 05:38:46,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:39:40] 2025-10-12 05:38:46,533 | INFO     | job 6838988948 has completed (purged errors)
[2025-10-12 01:39:40] 2025-10-12 05:38:46,533 | INFO     | overall cleanup function is called
[2025-10-12 01:39:40] 2025-10-12 05:38:47,537 | INFO     | --- collectZombieJob: --- 10, [13111]
[2025-10-12 01:39:40] 2025-10-12 05:38:47,537 | INFO     | zombie collector waiting for pid 13111
[2025-10-12 01:39:40] 2025-10-12 05:38:47,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:39:40] 2025-10-12 05:38:47,538 | INFO     | collected zombie processes
[2025-10-12 01:39:40] 2025-10-12 05:38:47,538 | INFO     | will attempt to kill all subprocesses of pid=13111
[2025-10-12 01:39:40] 2025-10-12 05:38:47,627 | INFO     | process IDs to be killed: [13111] (in reverse order)
[2025-10-12 01:39:40] 2025-10-12 05:38:47,685 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:39:40] 2025-10-12 05:38:47,685 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:39:40] 2025-10-12 05:38:47,690 | INFO     | did not find any defunct processes belonging to 13111
[2025-10-12 01:39:40] 2025-10-12 05:38:47,693 | INFO     | did not find any defunct processes belonging to 13111
[2025-10-12 01:39:40] 2025-10-12 05:38:47,694 | INFO     | ready for new job
[2025-10-12 01:39:40] 2025-10-12 05:38:47,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:39:40] 2025-10-12 05:38:47,696 | INFO     | ***************************************
[2025-10-12 01:39:40] 2025-10-12 05:38:47,696 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:39:40] 2025-10-12 05:38:47,696 | INFO     | ***************************************
[2025-10-12 01:39:40] 2025-10-12 05:38:47,696 | INFO     | 
[2025-10-12 01:39:40] 2025-10-12 05:38:47,697 | INFO     | architecture information:
[2025-10-12 01:39:40] 2025-10-12 05:38:47,698 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:39:40] 2025-10-12 05:38:47,716 | INFO     | cat /etc/os-release:
[2025-10-12 01:39:40] NAME="CentOS Linux"
[2025-10-12 01:39:40] VERSION="7 (Core)"
[2025-10-12 01:39:40] ID="centos"
[2025-10-12 01:39:40] ID_LIKE="rhel fedora"
[2025-10-12 01:39:40] VERSION_ID="7"
[2025-10-12 01:39:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:39:40] ANSI_COLOR="0;31"
[2025-10-12 01:39:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:39:40] HOME_URL="https://www.centos.org/"
[2025-10-12 01:39:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:39:40] 
[2025-10-12 01:39:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:39:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:39:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:39:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:39:40] 
[2025-10-12 01:39:40] 2025-10-12 05:38:47,716 | INFO     | ***************************************
[2025-10-12 01:39:40] 2025-10-12 05:38:48,219 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 01:39:40] 2025-10-12 05:38:48,239 | INFO     | sufficient remaining disk space (18592301056 B)
[2025-10-12 01:39:40] 2025-10-12 05:38:48,240 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:39:40] 2025-10-12 05:38:48,240 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:39:40] 2025-10-12 05:38:48,240 | INFO     | update_server=False
[2025-10-12 01:39:40] 2025-10-12 05:38:48,240 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:39:40] 2025-10-12 05:38:48,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:39:40] 2025-10-12 05:38:48,241 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:39:40] 2025-10-12 05:38:48,460 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:39:40] 2025-10-12 05:38:48,492 | INFO     | all job control threads have been joined
[2025-10-12 01:39:40] 2025-10-12 05:38:48,689 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 01:39:40] 2025-10-12 05:38:48,690 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 01:39:40] 2025-10-12 05:38:48,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:39:40] 2025-10-12 05:38:48,690 | INFO     | will abort loop
[2025-10-12 01:39:40] 2025-10-12 05:38:48,969 | INFO     | all data control threads have been joined
[2025-10-12 01:39:40] 2025-10-12 05:38:49,244 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:49,247 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:49,418 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:49,470 | INFO     | all payload control threads have been joined
[2025-10-12 01:39:40] 2025-10-12 05:38:49,498 | INFO     | [job] control thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:49,533 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:49,696 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:49,726 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:49,807 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:49,974 | INFO     | [data] control thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:50,073 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:50,247 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:50,366 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:50,437 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:50,475 | INFO     | [payload] control thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:50,690 | INFO     | [job] validate thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:38:52,466 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:39:40] 2025-10-12 05:39:18,833 | INFO     | PID=6670 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 01:39:40] 2025-10-12 05:39:18,834 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:39:40] 2025-10-12 05:39:18,834 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:39:40] 2025-10-12 05:39:18,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:39:40] 2025-10-12 05:39:33,525 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:39:40] 2025-10-12 05:39:35,240 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569763252032)>', '<ExcThread(monitor, started 140568432731904)>']
[2025-10-12 01:39:40] 2025-10-12 05:39:35,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:39:40] 2025-10-12 05:39:35,918 | INFO     | [monitor] control thread has ended
[2025-10-12 01:39:40] 2025-10-12 05:39:40,265 | INFO     | all workflow threads have been joined
[2025-10-12 01:39:40] 2025-10-12 05:39:40,266 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:39:40] 2025-10-12 05:39:40,266 | INFO     | traces error code: 0
[2025-10-12 01:39:40] 2025-10-12 05:39:40,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:39:40] 2025-10-12 05:39:40,391 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:39:40] 2025-10-12 05:39:40,396 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:39:40] 2025-10-12 05:39:40,400 [wrapper] pilotpid: 6670
[2025-10-12 01:39:40] 2025-10-12 05:39:40,404 [wrapper] Pilot exit status: 0
[2025-10-12 01:39:40] 2025-10-12 05:39:40,422 [wrapper] pandaids: 6838988948
[2025-10-12 01:39:40] 2025-10-12 05:39:40,472 [wrapper] cleanup supervisor_pilot  3236 6671
[2025-10-12 01:39:40] 2025-10-12 05:39:40,477 [wrapper] Test setup, not cleaning
[2025-10-12 01:39:40] 2025-10-12 05:39:40,482 [wrapper] apfmon messages muted
[2025-10-12 01:39:40] 2025-10-12 05:39:40,486 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:39:40] 2025-10-12 05:39:40,491 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:39:40]  *** Error codes and diagnostics ***
[2025-10-12 01:39:40]     "exeErrorCode": 0,
[2025-10-12 01:39:40]     "exeErrorDiag": "",
[2025-10-12 01:39:40]     "pilotErrorCode": 0,
[2025-10-12 01:39:40]     "pilotErrorDiag": "",
[2025-10-12 01:39:40]  *** Listing of results directory ***
[2025-10-12 01:39:40] total 407700
[2025-10-12 01:39:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 17:13 pilot3.tar.gz
[2025-10-12 01:39:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 17:22 queuedata.json
[2025-10-12 01:39:40] -rwx------ 1 boincer umatlas     36292 Oct 11 17:22 runpilot2-wrapper.sh
[2025-10-12 01:39:40] -rw-r--r-- 1 boincer umatlas       100 Oct 11 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:39:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 23:27 run_atlas
[2025-10-12 01:39:40] -rw-r--r-- 1 boincer umatlas       105 Oct 11 23:27 job.xml
[2025-10-12 01:39:40] -rw-r--r-- 2 boincer umatlas 221486981 Oct 11 23:27 EVNT.46676267._002621.pool.root.1
[2025-10-12 01:39:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:27 start_atlas.sh
[2025-10-12 01:39:40] drwxrwx--x 2 boincer umatlas      4096 Oct 11 23:27 shared
[2025-10-12 01:39:40] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 23:27 input.tar.gz
[2025-10-12 01:39:40] -rw-r--r-- 1 boincer umatlas         0 Oct 11 23:27 boinc_lockfile
[2025-10-12 01:39:40] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 23:27 pandaJob.out
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas    975512 Oct 11 23:27 agis_schedconf.cvmfs.json
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas   1560580 Oct 11 23:27 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:39:40] drwx------ 5 boincer umatlas      4096 Oct 11 23:27 pilot3
[2025-10-12 01:39:40] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 01:36 init_data.xml
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas 189155091 Oct 12 01:38 HITS.46676269._065263.pool.root.1
[2025-10-12 01:39:40] -rw-r--r-- 1 boincer umatlas       529 Oct 12 01:38 boinc_task_state.xml
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas      1050 Oct 12 01:38 memory_monitor_summary.json
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas    362311 Oct 12 01:38 log.46676269._065263.job.log.tgz.1
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas      7848 Oct 12 01:38 heartbeat.json
[2025-10-12 01:39:40] -rw-r--r-- 1 boincer umatlas        27 Oct 12 01:39 wrapper_checkpoint.txt
[2025-10-12 01:39:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 01:39 boinc_mmap_file
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas        95 Oct 12 01:39 pilot_heartbeat.json
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas      4931 Oct 12 01:39 pilotlog.txt
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas   1108216 Oct 12 01:39 log.46676269._065263.job.log.1
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas       357 Oct 12 01:39 output.list
[2025-10-12 01:39:40] -rw-r--r-- 1 boincer umatlas       620 Oct 12 01:39 runtime_log
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas   1484800 Oct 12 01:39 result.tar.gz
[2025-10-12 01:39:40] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 01:39 runtime_log.err
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas       658 Oct 12 01:39 7DaLDmCEwR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmufhNDms7E1Xn.diag
[2025-10-12 01:39:40] -rw-r--r-- 1 boincer umatlas     21074 Oct 12 01:39 stderr.txt
[2025-10-12 01:39:40] HITS file was successfully produced:
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas 189155091 Oct 12 01:38 shared/HITS.pool.root.1
[2025-10-12 01:39:40]  *** Contents of shared directory: ***
[2025-10-12 01:39:40] total 403056
[2025-10-12 01:39:40] -rw-r--r-- 2 boincer umatlas 221486981 Oct 11 23:27 ATLAS.root_0
[2025-10-12 01:39:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:27 start_atlas.sh
[2025-10-12 01:39:40] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 23:27 input.tar.gz
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas 189155091 Oct 12 01:38 HITS.pool.root.1
[2025-10-12 01:39:40] -rw------- 1 boincer umatlas   1484800 Oct 12 01:39 result.tar.gz
01:39:42 (3000): run_atlas exited; CPU time 55891.858792
01:39:42 (3000): called boinc_finish(0)

</stderr_txt>
]]>

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