Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:53:45 (2523512): wrapper (7.7.26015): starting
02:53:45 (2523512): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 02:53:45] Arguments: --nthreads 4
[2025-10-13 02:53:45] Threads: 4
[2025-10-13 02:53:45] Checking for CVMFS
[2025-10-13 02:53:45] No cvmfs_config command found, will try listing directly
[2025-10-13 02:53:45] CVMFS is ok
[2025-10-13 02:53:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:53:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:53:45] Further information can be found at the LHC@home message board.
[2025-10-13 02:53:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:53:45] Checking for apptainer binary...
[2025-10-13 02:53:45] which: no apptainer in ((null))
[2025-10-13 02:53:45] apptainer is not installed, using version from CVMFS
[2025-10-13 02:53:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:53:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2025-10-13 02:53:46] apptainer works
[2025-10-13 02:53:46] Set ATHENA_PROC_NUMBER=4
[2025-10-13 02:53:46] Set ATHENA_CORE_NUMBER=4
[2025-10-13 02:53:46] Starting ATLAS job with PandaID=6838989755
[2025-10-13 02:53:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:31:08]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:31:08] 2025-10-13 04:07:18,054 | INFO     | PID=2527199 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 06:31:08] 2025-10-13 04:07:18,054 | INFO     | .. there are 2 such processes running
[2025-10-13 06:31:08] 2025-10-13 04:07:19,054 | INFO     | time since job start (11604s) is within the limit (172800.0s)
[2025-10-13 06:31:08] 2025-10-13 04:07:19,156 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 06:31:08] 2025-10-13 04:07:19,163 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2614.2850750000007
[2025-10-13 06:31:08] 2025-10-13 04:07:19,171 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6838989755/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:31:08] 2025-10-13 04:07:19,172 | INFO     | extracted standard info from prmon json
[2025-10-13 06:31:08] 2025-10-13 04:07:19,172 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:31:08] 2025-10-13 04:07:19,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:31:08] 2025-10-13 04:07:19,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:31:08] 2025-10-13 04:07:19,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:31:08] 2025-10-13 04:07:19,177 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:31:08] 2025-10-13 04:07:19,177 | INFO     | sum of square deviations: 2126802667.5
[2025-10-13 06:31:08] 2025-10-13 04:07:19,178 | INFO     | sum of deviations: 23750033471.0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,178 | INFO     | mean x: 1760322624.5
[2025-10-13 06:31:08] 2025-10-13 04:07:19,179 | INFO     | mean y: 2339096.705263158
[2025-10-13 06:31:08] 2025-10-13 04:07:19,179 | INFO     | -- intersect: -19655206894.986305
[2025-10-13 06:31:08] 2025-10-13 04:07:19,179 | INFO     | intersect: -19655206894.986305
[2025-10-13 06:31:08] 2025-10-13 04:07:19,179 | INFO     | chi2: 1.3848803640010394
[2025-10-13 06:31:08] 2025-10-13 04:07:19,180 | INFO     | sum of square deviations: 1963274020.0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,181 | INFO     | sum of deviations: 22876312781.0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,181 | INFO     | mean x: 1760322472.0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,181 | INFO     | mean y: 2338281.724324324
[2025-10-13 06:31:08] 2025-10-13 04:07:19,181 | INFO     | -- intersect: -20509157849.057827
[2025-10-13 06:31:08] 2025-10-13 04:07:19,181 | INFO     | intersect: -20509157849.057827
[2025-10-13 06:31:08] 2025-10-13 04:07:19,182 | INFO     | chi2: 1.3858839780388574
[2025-10-13 06:31:08] 2025-10-13 04:07:19,182 | INFO     | current chi2=1.3858839780388574 (change=-0.07246936731187989 %)
[2025-10-13 06:31:08] 2025-10-13 04:07:19,182 | INFO     | right removable region: 184
[2025-10-13 06:31:08] 2025-10-13 04:07:19,182 | INFO     | sum of square deviations: 1963274020.0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,184 | INFO     | sum of deviations: -1541465852.0000017
[2025-10-13 06:31:08] 2025-10-13 04:07:19,184 | INFO     | mean x: 1760322777.0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,184 | INFO     | mean y: 2362375.2054054053
[2025-10-13 06:31:08] 2025-10-13 04:07:19,184 | INFO     | -- intersect: 1384480929.0093794
[2025-10-13 06:31:08] 2025-10-13 04:07:19,184 | INFO     | intersect: 1384480929.0093794
[2025-10-13 06:31:08] 2025-10-13 04:07:19,185 | INFO     | chi2: 0.03121557708123808
[2025-10-13 06:31:08] 2025-10-13 04:07:19,185 | INFO     | current chi2=0.03121557708123808 (change=97.74597301740538 %)
[2025-10-13 06:31:08] 2025-10-13 04:07:19,185 | INFO     | sum of square deviations: 1808350185.0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,186 | INFO     | sum of deviations: -526037739.50000024
[2025-10-13 06:31:08] 2025-10-13 04:07:19,186 | INFO     | mean x: 1760322929.5
[2025-10-13 06:31:08] 2025-10-13 04:07:19,187 | INFO     | mean y: 2361355.35
[2025-10-13 06:31:08] 2025-10-13 04:07:19,187 | INFO     | -- intersect: 514428267.11587477
[2025-10-13 06:31:08] 2025-10-13 04:07:19,187 | INFO     | intersect: 514428267.11587477
[2025-10-13 06:31:08] 2025-10-13 04:07:19,187 | INFO     | chi2: 0.027199272997827595
[2025-10-13 06:31:08] 2025-10-13 04:07:19,187 | INFO     | current chi2=0.027199272997827595 (change=12.866345776527254 %)
[2025-10-13 06:31:08] 2025-10-13 04:07:19,188 | INFO     | left removable region: 20
[2025-10-13 06:31:08] 2025-10-13 04:07:19,188 | INFO     | sum of square deviations: 1367709365.0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,189 | INFO     | sum of deviations: 4312669561.0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,189 | INFO     | mean x: 1760323051.5
[2025-10-13 06:31:08] 2025-10-13 04:07:19,189 | INFO     | mean y: 2355212.8292682925
[2025-10-13 06:31:08] 2025-10-13 04:07:19,190 | INFO     | -- intersect: -5548306233.2380295
[2025-10-13 06:31:08] 2025-10-13 04:07:19,190 | INFO     | intersect: -5548306233.2380295
[2025-10-13 06:31:08] 2025-10-13 04:07:19,190 | INFO     | chi2: 0.0071567576768170335
[2025-10-13 06:31:08] 2025-10-13 04:07:19,190 | INFO     | -- intersect: -5548306233.2380295
[2025-10-13 06:31:08] 2025-10-13 04:07:19,190 | INFO     | current memory leak: 3.15 B/s (using 164 data points, chi2=0.01)
[2025-10-13 06:31:08] 2025-10-13 04:07:19,191 | INFO     | could have reported an average CPU frequency of 2601 MHz (10 samples)
[2025-10-13 06:31:08] 2025-10-13 04:07:19,191 | INFO     | ..............................
[2025-10-13 06:31:08] 2025-10-13 04:07:19,191 | INFO     | . Timing measurements:
[2025-10-13 06:31:08] 2025-10-13 04:07:19,191 | INFO     | . get job = 0 s
[2025-10-13 06:31:08] 2025-10-13 04:07:19,192 | INFO     | . initial setup = 1 s
[2025-10-13 06:31:08] 2025-10-13 04:07:19,192 | INFO     | . payload setup = 5 s
[2025-10-13 06:31:08] 2025-10-13 04:07:19,192 | INFO     | . stage-in = 0 s
[2025-10-13 06:31:08] 2025-10-13 04:07:19,192 | INFO     | . payload execution = 11571 s
[2025-10-13 06:31:08] 2025-10-13 04:07:19,192 | INFO     | . stage-out = 1 s
[2025-10-13 06:31:08] 2025-10-13 04:07:19,192 | INFO     | . log creation = 0 s
[2025-10-13 06:31:08] 2025-10-13 04:07:19,192 | INFO     | ..............................
[2025-10-13 06:31:08] 2025-10-13 04:07:19,305 | INFO     | 
[2025-10-13 06:31:08] 2025-10-13 04:07:19,305 | INFO     | job summary report
[2025-10-13 06:31:08] 2025-10-13 04:07:19,305 | INFO     | --------------------------------------------------
[2025-10-13 06:31:08] 2025-10-13 04:07:19,305 | INFO     | PanDA job id: 6838989755
[2025-10-13 06:31:08] 2025-10-13 04:07:19,305 | INFO     | task id: 46676269
[2025-10-13 06:31:08] 2025-10-13 04:07:19,305 | INFO     | errors: (none)
[2025-10-13 06:31:08] 2025-10-13 04:07:19,306 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:31:08] 2025-10-13 04:07:19,306 | INFO     | pilot state: finished 
[2025-10-13 06:31:08] 2025-10-13 04:07:19,306 | INFO     | transexitcode: 0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,306 | INFO     | exeerrorcode: 0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,306 | INFO     | exeerrordiag: 
[2025-10-13 06:31:08] 2025-10-13 04:07:19,306 | INFO     | exitcode: 0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,306 | INFO     | exitmsg: OK
[2025-10-13 06:31:08] 2025-10-13 04:07:19,307 | INFO     | cpuconsumptiontime: 44411 s
[2025-10-13 06:31:08] 2025-10-13 04:07:19,307 | INFO     | nevents: 400
[2025-10-13 06:31:08] 2025-10-13 04:07:19,307 | INFO     | neventsw: 0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,307 | INFO     | pid: 2534776
[2025-10-13 06:31:08] 2025-10-13 04:07:19,307 | INFO     | pgrp: 2534776
[2025-10-13 06:31:08] 2025-10-13 04:07:19,307 | INFO     | corecount: 4
[2025-10-13 06:31:08] 2025-10-13 04:07:19,307 | INFO     | event service: False
[2025-10-13 06:31:08] 2025-10-13 04:07:19,307 | INFO     | sizes: {0: 2348868, 4: 2349130, 11: 2349158, 11580: 2378606, 11582: 2387626, 11583: 2387682, 11588: 2388004}
[2025-10-13 06:31:08] 2025-10-13 04:07:19,308 | INFO     | --------------------------------------------------
[2025-10-13 06:31:08] 2025-10-13 04:07:19,308 | INFO     | 
[2025-10-13 06:31:08] 2025-10-13 04:07:19,308 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-13 06:31:08] 2025-10-13 04:07:19,326 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,326 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,327 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,327 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,327 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,327 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,328 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,328 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,328 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,328 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,329 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,329 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:31:08] 2025-10-13 04:07:19,329 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,329 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:31:08] 2025-10-13 04:07:19,329 | INFO     | job 6838989755 has completed (purged errors)
[2025-10-13 06:31:08] 2025-10-13 04:07:19,329 | INFO     | overall cleanup function is called
[2025-10-13 06:31:08] 2025-10-13 04:07:20,337 | INFO     | --- collectZombieJob: --- 10, [2534776]
[2025-10-13 06:31:08] 2025-10-13 04:07:20,338 | INFO     | zombie collector waiting for pid 2534776
[2025-10-13 06:31:08] 2025-10-13 04:07:20,338 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:31:08] 2025-10-13 04:07:20,338 | INFO     | collected zombie processes
[2025-10-13 06:31:08] 2025-10-13 04:07:20,338 | INFO     | will attempt to kill all subprocesses of pid=2534776
[2025-10-13 06:31:08] 2025-10-13 04:07:20,668 | INFO     | process IDs to be killed: [2534776] (in reverse order)
[2025-10-13 06:31:08] 2025-10-13 04:07:20,747 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:31:08] 2025-10-13 04:07:20,747 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:31:08] 2025-10-13 04:07:20,757 | INFO     | did not find any defunct processes belonging to 2534776
[2025-10-13 06:31:08] 2025-10-13 04:07:20,766 | INFO     | did not find any defunct processes belonging to 2534776
[2025-10-13 06:31:08] 2025-10-13 04:07:20,767 | INFO     | ready for new job
[2025-10-13 06:31:08] 2025-10-13 04:07:20,767 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:31:08] 2025-10-13 04:07:20,769 | INFO     | ***************************************
[2025-10-13 06:31:08] 2025-10-13 04:07:20,769 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:31:08] 2025-10-13 04:07:20,769 | INFO     | ***************************************
[2025-10-13 06:31:08] 2025-10-13 04:07:20,769 | INFO     | 
[2025-10-13 06:31:08] 2025-10-13 04:07:20,772 | INFO     | architecture information:
[2025-10-13 06:31:08] 2025-10-13 04:07:20,772 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:31:08] 2025-10-13 04:07:20,784 | INFO     | cat /etc/os-release:
[2025-10-13 06:31:08] NAME="CentOS Linux"
[2025-10-13 06:31:08] VERSION="7 (Core)"
[2025-10-13 06:31:08] ID="centos"
[2025-10-13 06:31:08] ID_LIKE="rhel fedora"
[2025-10-13 06:31:08] VERSION_ID="7"
[2025-10-13 06:31:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:31:08] ANSI_COLOR="0;31"
[2025-10-13 06:31:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:31:08] HOME_URL="https://www.centos.org/"
[2025-10-13 06:31:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:31:08] 
[2025-10-13 06:31:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:31:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:31:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:31:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:31:08] 
[2025-10-13 06:31:08] 2025-10-13 04:07:20,784 | INFO     | ***************************************
[2025-10-13 06:31:08] 2025-10-13 04:07:21,287 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-13 06:31:08] 2025-10-13 04:07:21,301 | INFO     | sufficient remaining disk space (1677423804416 B)
[2025-10-13 06:31:08] 2025-10-13 04:07:21,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:31:08] 2025-10-13 04:07:21,301 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:31:08] 2025-10-13 04:07:21,301 | INFO     | update_server=False
[2025-10-13 06:31:08] 2025-10-13 04:07:21,301 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:31:08] 2025-10-13 04:07:21,302 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:31:08] 2025-10-13 04:07:21,302 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:31:08] 2025-10-13 04:07:21,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:31:08] 2025-10-13 04:07:21,303 | INFO     | aborting loop
[2025-10-13 06:31:08] 2025-10-13 04:07:22,183 | INFO     | all payload control threads have been joined
[2025-10-13 06:31:08] 2025-10-13 04:07:22,191 | INFO     | all data control threads have been joined
[2025-10-13 06:31:08] 2025-10-13 04:07:22,307 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:22,307 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:22,308 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:22,382 | INFO     | [job] validate thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:22,767 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:22,784 | INFO     | all job control threads have been joined
[2025-10-13 06:31:08] 2025-10-13 04:07:22,863 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:22,958 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:22,960 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:22,983 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:23,188 | INFO     | [payload] control thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:23,196 | INFO     | [data] control thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:23,308 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:23,583 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:23,767 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:23,789 | INFO     | [job] control thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:24,554 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:31:08] 2025-10-13 04:07:28,556 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:31:08] 2025-10-13 04:07:52,542 | INFO     | PID=2527199 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:31:08] 2025-10-13 04:07:52,542 | INFO     | .. there are 2 such processes running
[2025-10-13 06:31:08] 2025-10-13 04:07:52,543 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:31:08] 2025-10-13 04:07:52,543 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:31:08] 2025-10-13 04:07:52,543 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:31:08] 2025-10-13 04:08:13,420 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:31:08] 2025-10-13 04:08:13,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23271980476224)>', '<ExcThread(monitor, started 23271391065856)>']
[2025-10-13 06:31:08] 2025-10-13 04:08:14,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:31:08] 2025-10-13 04:08:14,612 | INFO     | [monitor] control thread has ended
[2025-10-13 06:31:08] 2025-10-13 04:08:18,812 | INFO     | all workflow threads have been joined
[2025-10-13 06:31:08] 2025-10-13 04:08:18,812 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:31:08] 2025-10-13 04:08:18,813 | INFO     | traces error code: 0
[2025-10-13 06:31:08] 2025-10-13 04:08:18,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:31:08] 2025-10-13 04:08:18,927 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:31:08] 2025-10-13 04:08:18,929 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:31:08] 2025-10-13 04:08:18,931 [wrapper] pilotpid: 2527199
[2025-10-13 06:31:08] 2025-10-13 04:08:18,933 [wrapper] Pilot exit status: 0
[2025-10-13 06:31:08] 2025-10-13 04:08:18,942 [wrapper] pandaids: 6838989755
[2025-10-13 06:31:08] 2025-10-13 04:08:18,997 [wrapper] cleanup supervisor_pilot 2668204 2527200
[2025-10-13 06:31:08] 2025-10-13 04:08:19,000 [wrapper] Test setup, not cleaning
[2025-10-13 06:31:08] 2025-10-13 04:08:19,002 [wrapper] apfmon messages muted
[2025-10-13 06:31:08] 2025-10-13 04:08:19,004 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:31:08] 2025-10-13 04:08:19,006 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:31:08]  *** Error codes and diagnostics ***
[2025-10-13 06:31:08]     "exeErrorCode": 0,
[2025-10-13 06:31:08]     "exeErrorDiag": "",
[2025-10-13 06:31:08]     "pilotErrorCode": 0,
[2025-10-13 06:31:08]     "pilotErrorDiag": "",
[2025-10-13 06:31:08]  *** Listing of results directory ***
[2025-10-13 06:31:08] total 406648
[2025-10-13 06:31:08] -rw-r--r-- 1 boinc boinc    557409 Oct 11 23:39 pilot3.tar.gz
[2025-10-13 06:31:08] -rw-r--r-- 1 boinc boinc      5112 Oct 12 00:00 queuedata.json
[2025-10-13 06:31:08] -rwx------ 1 boinc boinc     36292 Oct 12 00:00 runpilot2-wrapper.sh
[2025-10-13 06:31:08] -rw-r--r-- 1 boinc boinc       100 Oct 13 02:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:31:08] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 02:53 run_atlas
[2025-10-13 06:31:08] -rw-r--r-- 1 boinc boinc       105 Oct 13 02:53 job.xml
[2025-10-13 06:31:08] -rw-r--r-- 1 boinc boinc      6422 Oct 13 02:53 init_data.xml
[2025-10-13 06:31:08] -rw-r--r-- 2 boinc boinc 220344440 Oct 13 02:53 EVNT.46676267._002638.pool.root.1
[2025-10-13 06:31:08] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:53 start_atlas.sh
[2025-10-13 06:31:08] drwxrwx--x 2 boinc boinc      4096 Oct 13 02:53 shared
[2025-10-13 06:31:08] -rw-r--r-- 2 boinc boinc    569683 Oct 13 02:53 input.tar.gz
[2025-10-13 06:31:08] -rw-r--r-- 1 boinc boinc         0 Oct 13 02:53 boinc_lockfile
[2025-10-13 06:31:08] -rw-r--r-- 1 boinc boinc      2550 Oct 13 02:53 pandaJob.out
[2025-10-13 06:31:08] -rw------- 1 boinc boinc    975603 Oct 13 02:53 agis_schedconf.cvmfs.json
[2025-10-13 06:31:08] drwx------ 5 boinc boinc      4096 Oct 13 02:53 pilot3
[2025-10-13 06:31:08] -rw------- 1 boinc boinc 188118310 Oct 13 06:06 HITS.46676269._065663.pool.root.1
[2025-10-13 06:31:08] -rw-r--r-- 1 boinc boinc       527 Oct 13 06:06 boinc_task_state.xml
[2025-10-13 06:31:08] -rw------- 1 boinc boinc        95 Oct 13 06:07 pilot_heartbeat.json
[2025-10-13 06:31:08] -rw------- 1 boinc boinc      1032 Oct 13 06:07 memory_monitor_summary.json
[2025-10-13 06:31:08] -rw------- 1 boinc boinc   1560580 Oct 13 06:07 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:31:08] -rw------- 1 boinc boinc    356744 Oct 13 06:07 log.46676269._065663.job.log.tgz.1
[2025-10-13 06:31:08] -rw------- 1 boinc boinc      7827 Oct 13 06:07 heartbeat.json
[2025-10-13 06:31:08] -rw------- 1 boinc boinc      4834 Oct 13 06:08 pilotlog.txt
[2025-10-13 06:31:08] -rw------- 1 boinc boinc   1657738 Oct 13 06:08 log.46676269._065663.job.log.1
[2025-10-13 06:31:08] -rw------- 1 boinc boinc       357 Oct 13 06:08 output.list
[2025-10-13 06:31:08] -rw-r--r-- 1 boinc boinc       620 Oct 13 06:08 runtime_log
[2025-10-13 06:31:08] -rw------- 1 boinc boinc   2037760 Oct 13 06:08 result.tar.gz
[2025-10-13 06:31:08] -rw------- 1 boinc boinc       664 Oct 13 06:08 D01NDm7owR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjjhNDmiF98Rn.diag
[2025-10-13 06:31:08] -rw-r--r-- 1 boinc boinc      9070 Oct 13 06:08 runtime_log.err
[2025-10-13 06:31:08] -rw-r--r-- 1 boinc boinc        27 Oct 13 06:31 wrapper_checkpoint.txt
[2025-10-13 06:31:08] -rw-r--r-- 1 boinc boinc      8192 Oct 13 06:31 boinc_mmap_file
[2025-10-13 06:31:08] -rw-r--r-- 1 boinc boinc     20985 Oct 13 06:31 stderr.txt
[2025-10-13 06:31:08] HITS file was successfully produced:
[2025-10-13 06:31:08] -rw------- 1 boinc boinc 188118310 Oct 13 06:06 shared/HITS.pool.root.1
[2025-10-13 06:31:08]  *** Contents of shared directory: ***
[2025-10-13 06:31:08] total 401472
[2025-10-13 06:31:08] -rw-r--r-- 2 boinc boinc 220344440 Oct 13 02:53 ATLAS.root_0
[2025-10-13 06:31:08] -rw-r--r-- 2 boinc boinc     15120 Oct 13 02:53 start_atlas.sh
[2025-10-13 06:31:08] -rw-r--r-- 2 boinc boinc    569683 Oct 13 02:53 input.tar.gz
[2025-10-13 06:31:08] -rw------- 1 boinc boinc 188118310 Oct 13 06:06 HITS.pool.root.1
[2025-10-13 06:31:08] -rw------- 1 boinc boinc   2037760 Oct 13 06:08 result.tar.gz
06:31:10 (2523512): run_atlas exited; CPU time 44841.358609
06:31:10 (2523512): called boinc_finish(0)

</stderr_txt>
]]>

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