Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:23:00 (384812): wrapper (7.7.26015): starting
23:23:00 (384812): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 23:23:00] Arguments: --nthreads 8
[2025-10-11 23:23:00] Threads: 8
[2025-10-11 23:23:00] Checking for CVMFS
[2025-10-11 23:23:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:23:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:23:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:23:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:23:00] 2.13.2.0 601499 128715 496120 151606 0 192 25339838 32935937 50001 16776704 0 452503773 99.680 375763096 16752 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 23:23:00] CVMFS is ok
[2025-10-11 23:23:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:23:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:23:00] Further information can be found at the LHC@home message board.
[2025-10-11 23:23:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:23:00] Checking for apptainer binary...
[2025-10-11 23:23:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:23:00] Running /usr/bin/apptainer --version
[2025-10-11 23:23:00] apptainer version 1.4.3-1.el9
[2025-10-11 23:23:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:23:01] c7-16-9.aglt2.org
[2025-10-11 23:23:01] apptainer works
[2025-10-11 23:23:01] Set ATHENA_PROC_NUMBER=8
[2025-10-11 23:23:01] Set ATHENA_CORE_NUMBER=8
[2025-10-11 23:23:01] Starting ATLAS job with PandaID=6838850530
[2025-10-11 23:23:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:01:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:01:06] 2025-10-12 07:00:12,623 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:01:06] 2025-10-12 07:00:12,627 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:01:06] 2025-10-12 07:00:12,627 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:01:06] 2025-10-12 07:00:12,630 | INFO     | fitting pss+swap vs Time
[2025-10-12 03:01:06] 2025-10-12 07:00:12,631 | INFO     | sum of square deviations: 2954393058.830197
[2025-10-12 03:01:06] 2025-10-12 07:00:12,640 | INFO     | sum of deviations: 6155776194.433973
[2025-10-12 03:01:06] 2025-10-12 07:00:12,641 | INFO     | mean x: 1760245902.528302
[2025-10-12 03:01:06] 2025-10-12 07:00:12,641 | INFO     | mean y: 2185911.8443396227
[2025-10-12 03:01:06] 2025-10-12 07:00:12,641 | INFO     | -- intersect: -3665464129.0828795
[2025-10-12 03:01:06] 2025-10-12 07:00:12,642 | INFO     | intersect: -3665464129.0828795
[2025-10-12 03:01:06] 2025-10-12 07:00:12,642 | INFO     | chi2: 2.3643546820533268
[2025-10-12 03:01:06] 2025-10-12 07:00:12,651 | INFO     | sum of square deviations: 2750242223.8260922
[2025-10-12 03:01:06] 2025-10-12 07:00:12,669 | INFO     | sum of deviations: 20115293705.768105
[2025-10-12 03:01:06] 2025-10-12 07:00:12,670 | INFO     | mean x: 1760245750.0289855
[2025-10-12 03:01:06] 2025-10-12 07:00:12,670 | INFO     | mean y: 2196171.3719806764
[2025-10-12 03:01:06] 2025-10-12 07:00:12,670 | INFO     | -- intersect: -12872255376.719034
[2025-10-12 03:01:06] 2025-10-12 07:00:12,670 | INFO     | intersect: -12872255376.719034
[2025-10-12 03:01:06] 2025-10-12 07:00:12,670 | INFO     | chi2: 1.6986198298767476
[2025-10-12 03:01:06] 2025-10-12 07:00:12,670 | INFO     | current chi2=1.6986198298767476 (change=28.157148215952983 %)
[2025-10-12 03:01:06] 2025-10-12 07:00:12,671 | INFO     | sum of square deviations: 2555719476.321768
[2025-10-12 03:01:06] 2025-10-12 07:00:12,672 | INFO     | sum of deviations: 18905350819.85644
[2025-10-12 03:01:06] 2025-10-12 07:00:12,672 | INFO     | mean x: 1760245597.529703
[2025-10-12 03:01:06] 2025-10-12 07:00:12,672 | INFO     | mean y: 2195213.4405940594
[2025-10-12 03:01:06] 2025-10-12 07:00:12,672 | INFO     | -- intersect: -13018819361.406712
[2025-10-12 03:01:06] 2025-10-12 07:00:12,672 | INFO     | intersect: -13018819361.406712
[2025-10-12 03:01:06] 2025-10-12 07:00:12,672 | INFO     | chi2: 1.6980611558246281
[2025-10-12 03:01:06] 2025-10-12 07:00:12,672 | INFO     | current chi2=1.6980611558246281 (change=0.032889881672937354 %)
[2025-10-12 03:01:06] 2025-10-12 07:00:12,672 | INFO     | right removable region: 201
[2025-10-12 03:01:06] 2025-10-12 07:00:12,673 | INFO     | sum of square deviations: 2750238563.8260922
[2025-10-12 03:01:06] 2025-10-12 07:00:12,678 | INFO     | sum of deviations: -24460989708.550713
[2025-10-12 03:01:06] 2025-10-12 07:00:12,678 | INFO     | mean x: 1760246055.0289855
[2025-10-12 03:01:06] 2025-10-12 07:00:12,678 | INFO     | mean y: 2208559.425120773
[2025-10-12 03:01:06] 2025-10-12 07:00:12,678 | INFO     | -- intersect: 15658072455.34847
[2025-10-12 03:01:06] 2025-10-12 07:00:12,678 | INFO     | intersect: 15658072455.34847
[2025-10-12 03:01:06] 2025-10-12 07:00:12,678 | INFO     | chi2: 0.8158860273010908
[2025-10-12 03:01:06] 2025-10-12 07:00:12,678 | INFO     | current chi2=0.8158860273010908 (change=65.4922320456365 %)
[2025-10-12 03:01:06] 2025-10-12 07:00:12,679 | INFO     | sum of square deviations: 2555712156.321768
[2025-10-12 03:01:06] 2025-10-12 07:00:12,680 | INFO     | sum of deviations: -26846828803.66832
[2025-10-12 03:01:06] 2025-10-12 07:00:12,680 | INFO     | mean x: 1760246207.529703
[2025-10-12 03:01:06] 2025-10-12 07:00:12,680 | INFO     | mean y: 2210377.3613861385
[2025-10-12 03:01:06] 2025-10-12 07:00:12,680 | INFO     | -- intersect: 18492958041.945656
[2025-10-12 03:01:06] 2025-10-12 07:00:12,680 | INFO     | intersect: 18492958041.945656
[2025-10-12 03:01:06] 2025-10-12 07:00:12,680 | INFO     | chi2: 0.7623880978161188
[2025-10-12 03:01:06] 2025-10-12 07:00:12,680 | INFO     | current chi2=0.7623880978161188 (change=6.557034646363588 %)
[2025-10-12 03:01:06] 2025-10-12 07:00:12,680 | INFO     | left removable region: 20
[2025-10-12 03:01:06] 2025-10-12 07:00:12,681 | INFO     | sum of square deviations: 1838611008.861876
[2025-10-12 03:01:06] 2025-10-12 07:00:12,681 | INFO     | sum of deviations: -9388153760.82873
[2025-10-12 03:01:06] 2025-10-12 07:00:12,682 | INFO     | mean x: 1760246177.0276244
[2025-10-12 03:01:06] 2025-10-12 07:00:12,682 | INFO     | mean y: 2217379.1657458562
[2025-10-12 03:01:06] 2025-10-12 07:00:12,682 | INFO     | -- intersect: 8990231530.715813
[2025-10-12 03:01:06] 2025-10-12 07:00:12,682 | INFO     | intersect: 8990231530.715813
[2025-10-12 03:01:06] 2025-10-12 07:00:12,682 | INFO     | chi2: 0.07340243077360016
[2025-10-12 03:01:06] 2025-10-12 07:00:12,682 | INFO     | -- intersect: 8990231530.715813
[2025-10-12 03:01:06] 2025-10-12 07:00:12,682 | INFO     | current memory leak: -5.11 B/s (using 181 data points, chi2=0.07)
[2025-10-12 03:01:06] 2025-10-12 07:00:12,683 | INFO     | could have reported an average CPU frequency of 3283 MHz (11 samples)
[2025-10-12 03:01:06] 2025-10-12 07:00:12,683 | INFO     | ..............................
[2025-10-12 03:01:06] 2025-10-12 07:00:12,683 | INFO     | . Timing measurements:
[2025-10-12 03:01:06] 2025-10-12 07:00:12,687 | INFO     | . get job = 0 s
[2025-10-12 03:01:06] 2025-10-12 07:00:12,687 | INFO     | . initial setup = 3 s
[2025-10-12 03:01:06] 2025-10-12 07:00:12,687 | INFO     | . payload setup = 19 s
[2025-10-12 03:01:06] 2025-10-12 07:00:12,687 | INFO     | . stage-in = 0 s
[2025-10-12 03:01:06] 2025-10-12 07:00:12,687 | INFO     | . payload execution = 12929 s
[2025-10-12 03:01:06] 2025-10-12 07:00:12,687 | INFO     | . stage-out = 5 s
[2025-10-12 03:01:06] 2025-10-12 07:00:12,687 | INFO     | . log creation = 0 s
[2025-10-12 03:01:06] 2025-10-12 07:00:12,687 | INFO     | ..............................
[2025-10-12 03:01:06] 2025-10-12 07:00:12,920 | INFO     | 
[2025-10-12 03:01:06] 2025-10-12 07:00:12,921 | INFO     | job summary report
[2025-10-12 03:01:06] 2025-10-12 07:00:12,921 | INFO     | --------------------------------------------------
[2025-10-12 03:01:06] 2025-10-12 07:00:12,921 | INFO     | PanDA job id: 6838850530
[2025-10-12 03:01:06] 2025-10-12 07:00:12,921 | INFO     | task id: 46676269
[2025-10-12 03:01:06] 2025-10-12 07:00:12,921 | INFO     | errors: (none)
[2025-10-12 03:01:06] 2025-10-12 07:00:12,921 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:01:06] 2025-10-12 07:00:12,921 | INFO     | pilot state: finished 
[2025-10-12 03:01:06] 2025-10-12 07:00:12,921 | INFO     | transexitcode: 0
[2025-10-12 03:01:06] 2025-10-12 07:00:12,921 | INFO     | exeerrorcode: 0
[2025-10-12 03:01:06] 2025-10-12 07:00:12,921 | INFO     | exeerrordiag: 
[2025-10-12 03:01:06] 2025-10-12 07:00:12,921 | INFO     | exitcode: 0
[2025-10-12 03:01:06] 2025-10-12 07:00:12,921 | INFO     | exitmsg: OK
[2025-10-12 03:01:06] 2025-10-12 07:00:12,921 | INFO     | cpuconsumptiontime: 31379 s
[2025-10-12 03:01:06] 2025-10-12 07:00:12,925 | INFO     | nevents: 400
[2025-10-12 03:01:06] 2025-10-12 07:00:12,925 | INFO     | neventsw: 0
[2025-10-12 03:01:06] 2025-10-12 07:00:12,925 | INFO     | pid: 397165
[2025-10-12 03:01:06] 2025-10-12 07:00:12,925 | INFO     | pgrp: 397165
[2025-10-12 03:01:06] 2025-10-12 07:00:12,925 | INFO     | corecount: 8
[2025-10-12 03:01:06] 2025-10-12 07:00:12,925 | INFO     | event service: False
[2025-10-12 03:01:06] 2025-10-12 07:00:12,925 | INFO     | sizes: {0: 2348851, 11: 2349141, 12954: 2378956, 12960: 2387954, 12964: 2388010, 12975: 2388204}
[2025-10-12 03:01:06] 2025-10-12 07:00:12,925 | INFO     | --------------------------------------------------
[2025-10-12 03:01:06] 2025-10-12 07:00:12,925 | INFO     | 
[2025-10-12 03:01:06] 2025-10-12 07:00:12,926 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 03:01:06] 2025-10-12 07:00:13,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:01:06] 2025-10-12 07:00:13,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:01:06] 2025-10-12 07:00:13,038 | INFO     | job 6838850530 has completed (purged errors)
[2025-10-12 03:01:06] 2025-10-12 07:00:13,038 | INFO     | overall cleanup function is called
[2025-10-12 03:01:06] 2025-10-12 07:00:14,046 | INFO     | --- collectZombieJob: --- 10, [397165]
[2025-10-12 03:01:06] 2025-10-12 07:00:14,046 | INFO     | zombie collector waiting for pid 397165
[2025-10-12 03:01:06] 2025-10-12 07:00:14,046 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:01:06] 2025-10-12 07:00:14,046 | INFO     | collected zombie processes
[2025-10-12 03:01:06] 2025-10-12 07:00:14,046 | INFO     | will attempt to kill all subprocesses of pid=397165
[2025-10-12 03:01:06] 2025-10-12 07:00:15,437 | INFO     | process IDs to be killed: [397165] (in reverse order)
[2025-10-12 03:01:06] 2025-10-12 07:00:15,743 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:01:06] 2025-10-12 07:00:15,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:01:06] 2025-10-12 07:00:15,817 | INFO     | did not find any defunct processes belonging to 397165
[2025-10-12 03:01:06] 2025-10-12 07:00:15,902 | INFO     | did not find any defunct processes belonging to 397165
[2025-10-12 03:01:06] 2025-10-12 07:00:15,903 | INFO     | ready for new job
[2025-10-12 03:01:06] 2025-10-12 07:00:15,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:01:06] 2025-10-12 07:00:15,922 | INFO     | ***************************************
[2025-10-12 03:01:06] 2025-10-12 07:00:15,922 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:01:06] 2025-10-12 07:00:15,922 | INFO     | ***************************************
[2025-10-12 03:01:06] 2025-10-12 07:00:15,922 | INFO     | 
[2025-10-12 03:01:06] 2025-10-12 07:00:15,949 | INFO     | architecture information:
[2025-10-12 03:01:06] 2025-10-12 07:00:15,954 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:01:06] 2025-10-12 07:00:16,026 | INFO     | cat /etc/os-release:
[2025-10-12 03:01:06] NAME="CentOS Linux"
[2025-10-12 03:01:06] VERSION="7 (Core)"
[2025-10-12 03:01:06] ID="centos"
[2025-10-12 03:01:06] ID_LIKE="rhel fedora"
[2025-10-12 03:01:06] VERSION_ID="7"
[2025-10-12 03:01:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:01:06] ANSI_COLOR="0;31"
[2025-10-12 03:01:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:01:06] HOME_URL="https://www.centos.org/"
[2025-10-12 03:01:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:01:06] 
[2025-10-12 03:01:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:01:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:01:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:01:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:01:06] 
[2025-10-12 03:01:06] 2025-10-12 07:00:16,026 | INFO     | ***************************************
[2025-10-12 03:01:06] 2025-10-12 07:00:16,530 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 03:01:06] 2025-10-12 07:00:16,593 | INFO     | sufficient remaining disk space (73042755584 B)
[2025-10-12 03:01:06] 2025-10-12 07:00:16,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:01:06] 2025-10-12 07:00:16,594 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:01:06] 2025-10-12 07:00:16,594 | INFO     | update_server=False
[2025-10-12 03:01:06] 2025-10-12 07:00:16,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:01:06] 2025-10-12 07:00:16,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:01:06] 2025-10-12 07:00:16,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:01:06] 2025-10-12 07:00:17,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:01:06] 2025-10-12 07:00:17,067 | INFO     | aborting loop
[2025-10-12 03:01:06] 2025-10-12 07:00:17,145 | INFO     | all job control threads have been joined
[2025-10-12 03:01:06] 2025-10-12 07:00:17,522 | INFO     | all data control threads have been joined
[2025-10-12 03:01:06] 2025-10-12 07:00:17,599 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:17,811 | INFO     | all payload control threads have been joined
[2025-10-12 03:01:06] 2025-10-12 07:00:17,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:01:06] 2025-10-12 07:00:18,073 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:18,168 | INFO     | [job] control thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:18,414 | INFO     | [job] validate thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:18,415 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:18,531 | INFO     | [data] control thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:18,601 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:18,735 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:18,736 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:18,736 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:18,817 | INFO     | [payload] control thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:18,886 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:18,910 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:18,955 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:19,077 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:20,683 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:01:06] 2025-10-12 07:00:48,522 | INFO     | PID=389366 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 03:01:06] 2025-10-12 07:00:48,523 | INFO     | .. there are 66 such processes running
[2025-10-12 03:01:06] 2025-10-12 07:00:48,523 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:01:06] 2025-10-12 07:00:48,523 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:01:06] 2025-10-12 07:00:48,523 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:01:06] 2025-10-12 07:00:58,246 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:01:06] 2025-10-12 07:00:59,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139645780870976)>', '<ExcThread(monitor, started 139645507573504)>']
[2025-10-12 03:01:06] 2025-10-12 07:00:59,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:01:06] 2025-10-12 07:00:59,613 | INFO     | [monitor] control thread has ended
[2025-10-12 03:01:06] 2025-10-12 07:01:04,318 | INFO     | all workflow threads have been joined
[2025-10-12 03:01:06] 2025-10-12 07:01:04,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:01:06] 2025-10-12 07:01:04,319 | INFO     | traces error code: 0
[2025-10-12 03:01:06] 2025-10-12 07:01:04,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:01:06] 2025-10-12 07:01:04,677 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:01:06] 2025-10-12 07:01:04,710 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:01:06] 2025-10-12 07:01:04,733 [wrapper] pilotpid: 389366
[2025-10-12 03:01:06] 2025-10-12 07:01:04,760 [wrapper] Pilot exit status: 0
[2025-10-12 03:01:06] 2025-10-12 07:01:04,835 [wrapper] pandaids: 6838850530
[2025-10-12 03:01:06] 2025-10-12 07:01:05,109 [wrapper] cleanup supervisor_pilot 1741103 389367
[2025-10-12 03:01:06] 2025-10-12 07:01:05,148 [wrapper] Test setup, not cleaning
[2025-10-12 03:01:06] 2025-10-12 07:01:05,161 [wrapper] apfmon messages muted
[2025-10-12 03:01:06] 2025-10-12 07:01:05,223 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:01:06] 2025-10-12 07:01:05,259 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:01:06]  *** Error codes and diagnostics ***
[2025-10-12 03:01:06]     "exeErrorCode": 0,
[2025-10-12 03:01:06]     "exeErrorDiag": "",
[2025-10-12 03:01:06]     "pilotErrorCode": 0,
[2025-10-12 03:01:06]     "pilotErrorDiag": "",
[2025-10-12 03:01:06]  *** Listing of results directory ***
[2025-10-12 03:01:06] total 409748
[2025-10-12 03:01:06] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:56 pilot3.tar.gz
[2025-10-12 03:01:06] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:58 queuedata.json
[2025-10-12 03:01:06] -rwx------. 1 boincer umatlas     36292 Oct 11 14:59 runpilot2-wrapper.sh
[2025-10-12 03:01:06] -rw-r--r--. 1 boincer umatlas       100 Oct 11 23:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:01:06] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 23:22 run_atlas
[2025-10-12 03:01:06] -rw-r--r--. 1 boincer umatlas       105 Oct 11 23:22 job.xml
[2025-10-12 03:01:06] -rw-r--r--. 2 boincer umatlas 221020919 Oct 11 23:22 EVNT.46676267._002540.pool.root.1
[2025-10-12 03:01:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 23:23 start_atlas.sh
[2025-10-12 03:01:06] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 23:23 shared
[2025-10-12 03:01:06] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 23:23 input.tar.gz
[2025-10-12 03:01:06] -rw-r--r--. 1 boincer umatlas         0 Oct 11 23:23 boinc_lockfile
[2025-10-12 03:01:06] -rw-r--r--. 1 boincer umatlas      2547 Oct 11 23:23 pandaJob.out
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas    975512 Oct 11 23:23 agis_schedconf.cvmfs.json
[2025-10-12 03:01:06] drwx------. 5 boincer umatlas      4096 Oct 11 23:23 pilot3
[2025-10-12 03:01:06] -rw-r--r--. 1 boincer umatlas      6936 Oct 12 02:57 init_data.xml
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas 190695953 Oct 12 02:58 HITS.46676269._063206.pool.root.1
[2025-10-12 03:01:06] -rw-r--r--. 1 boincer umatlas       531 Oct 12 02:58 boinc_task_state.xml
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas      1048 Oct 12 02:59 memory_monitor_summary.json
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas        95 Oct 12 02:59 pilot_heartbeat.json
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas   1560580 Oct 12 02:59 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas    418094 Oct 12 02:59 log.46676269._063206.job.log.tgz.1
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas      7789 Oct 12 03:00 heartbeat.json
[2025-10-12 03:01:06] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 03:01 boinc_mmap_file
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas      4823 Oct 12 03:01 pilotlog.txt
[2025-10-12 03:01:06] -rw-r--r--. 1 boincer umatlas        28 Oct 12 03:01 wrapper_checkpoint.txt
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas   1558843 Oct 12 03:01 log.46676269._063206.job.log.1
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas       357 Oct 12 03:01 output.list
[2025-10-12 03:01:06] -rw-r--r--. 1 boincer umatlas       620 Oct 12 03:01 runtime_log
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas   1996800 Oct 12 03:01 result.tar.gz
[2025-10-12 03:01:06] -rw-r--r--. 1 boincer umatlas      8699 Oct 12 03:01 runtime_log.err
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas       658 Oct 12 03:01 fEiKDmDztR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmXPSMDmXqSibn.diag
[2025-10-12 03:01:06] -rw-r--r--. 1 boincer umatlas     20956 Oct 12 03:01 stderr.txt
[2025-10-12 03:01:06] HITS file was successfully produced:
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas 190695953 Oct 12 02:58 shared/HITS.pool.root.1
[2025-10-12 03:01:06]  *** Contents of shared directory: ***
[2025-10-12 03:01:06] total 404608
[2025-10-12 03:01:06] -rw-r--r--. 2 boincer umatlas 221020919 Oct 11 23:22 ATLAS.root_0
[2025-10-12 03:01:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 23:23 start_atlas.sh
[2025-10-12 03:01:06] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 23:23 input.tar.gz
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas 190695953 Oct 12 02:58 HITS.pool.root.1
[2025-10-12 03:01:06] -rw-------. 1 boincer umatlas   1996800 Oct 12 03:01 result.tar.gz
03:01:07 (384812): run_atlas exited; CPU time 31969.551862
03:01:07 (384812): called boinc_finish(0)

</stderr_txt>
]]>

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