Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:09:02 (24685): wrapper (7.7.26015): starting
23:09:02 (24685): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 23:09:02] Arguments: --nthreads 12
[2025-10-11 23:09:02] Threads: 12
[2025-10-11 23:09:02] Checking for CVMFS
[2025-10-11 23:09:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:09:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:09:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:09:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:09:02] 2.11.2.0 2945 222322 97172 151604 0 59 14969534 20275201 1 130560 2 109140016 99.984 13397294 12760 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 23:09:02] CVMFS is ok
[2025-10-11 23:09:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:09:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:09:02] Further information can be found at the LHC@home message board.
[2025-10-11 23:09:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:09:02] Checking for apptainer binary...
[2025-10-11 23:09:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:09:02] Running /usr/bin/apptainer --version
[2025-10-11 23:09:02] apptainer version 1.3.2-1.el7
[2025-10-11 23:09:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:09:04] c-205-2.aglt2.org
[2025-10-11 23:09:04] apptainer works
[2025-10-11 23:09:04] Set ATHENA_PROC_NUMBER=12
[2025-10-11 23:09:04] Set ATHENA_CORE_NUMBER=12
[2025-10-11 23:09:04] Starting ATLAS job with PandaID=6838634674
[2025-10-11 23:09:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:19:49]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:19:49]  storage_token=
[2025-10-12 00:19:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838634674/log.46676269._061969.job.log.tgz.1
[2025-10-12 00:19:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/68/log.46676269._061969.job.log.tgz.1
[2025-10-12 00:19:49]  workdir=None
[2025-10-12 00:19:49] ]
[2025-10-12 00:19:49] 2025-10-12 04:19:08,039 | INFO     | transferring file log.46676269._061969.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838634674/log.46676269._061969.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 00:19:49] 2025-10-12 04:19:08,039 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838634674/log.46676269._061969.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._061969.job
[2025-10-12 00:19:49] 2025-10-12 04:19:08,064 | INFO     | adding to output.list: log.46676269._061969.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/68/log.46676269._061969.job.log.tg
[2025-10-12 00:19:49] 2025-10-12 04:19:08,065 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 00:19:49] 2025-10-12 04:19:08,066 | INFO     | summary of transferred files:
[2025-10-12 00:19:49] 2025-10-12 04:19:08,066 | INFO     |  -- lfn=log.46676269._061969.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 00:19:49] 2025-10-12 04:19:08,066 | INFO     | stage-out finished correctly
[2025-10-12 00:19:49] 2025-10-12 04:19:08,792 | INFO     | monitor loop #312: job 0:6838634674 is in state 'finished'
[2025-10-12 00:19:49] 2025-10-12 04:19:08,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:19:49] 2025-10-12 04:19:09,979 | INFO     | time since job start (4190s) is within the limit (172800.0s)
[2025-10-12 00:19:49] 2025-10-12 04:19:10,901 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 00:19:49] 2025-10-12 04:19:11,096 | INFO     | PID=30180 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 00:19:49] 2025-10-12 04:19:11,296 | INFO     | monitor loop #313: job 0:6838634674 is in state 'finished'
[2025-10-12 00:19:49] 2025-10-12 04:19:11,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:19:49] 2025-10-12 04:19:12,097 | INFO     | time since job start (4193s) is within the limit (172800.0s)
[2025-10-12 00:19:49] 2025-10-12 04:19:12,804 | INFO     | job 6838634674 has state=finished
[2025-10-12 00:19:49] 2025-10-12 04:19:12,805 | INFO     | preparing for final server update for job 6838634674 in state='finished'
[2025-10-12 00:19:49] 2025-10-12 04:19:12,805 | INFO     | this job has now completed (state=finished)
[2025-10-12 00:19:49] 2025-10-12 04:19:12,805 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 00:19:49] 2025-10-12 04:19:12,806 | INFO     | log transfer has been attempted: DONE
[2025-10-12 00:19:49] 2025-10-12 04:19:12,806 | INFO     | job 6838634674 has finished - writing final server update
[2025-10-12 00:19:49] 2025-10-12 04:19:12,806 | INFO     | total number of processed events: 400 (read)
[2025-10-12 00:19:49] 2025-10-12 04:19:12,807 | INFO     | executing command: lscpu
[2025-10-12 00:19:49] 2025-10-12 04:19:12,834 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 00:19:49] 2025-10-12 04:19:13,799 | INFO     | monitor loop #314: job 0:6838634674 is in state 'finished'
[2025-10-12 00:19:49] 2025-10-12 04:19:13,799 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:19:49] 2025-10-12 04:19:14,103 | INFO     | time since job start (4195s) is within the limit (172800.0s)
[2025-10-12 00:19:49] 2025-10-12 04:19:16,109 | INFO     | time since job start (4197s) is within the limit (172800.0s)
[2025-10-12 00:19:49] 2025-10-12 04:19:16,302 | INFO     | monitor loop #315: job 0:6838634674 is in state 'finished'
[2025-10-12 00:19:49] 2025-10-12 04:19:16,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:19:49] 2025-10-12 04:19:17,624 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 00:19:49] 2025-10-12 04:19:17,628 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 00:19:49] 2025-10-12 04:19:17,630 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838634674/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:19:49] 2025-10-12 04:19:17,630 | INFO     | extracted standard info from prmon json
[2025-10-12 00:19:49] 2025-10-12 04:19:17,631 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 00:19:49] 2025-10-12 04:19:17,631 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:19:49] 2025-10-12 04:19:17,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:19:49] 2025-10-12 04:19:17,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:19:49] 2025-10-12 04:19:17,633 | INFO     | fitting pss+swap vs Time
[2025-10-12 00:19:49] 2025-10-12 04:19:17,633 | INFO     | sum of square deviations: 73882315.5
[2025-10-12 00:19:49] 2025-10-12 04:19:17,633 | INFO     | sum of deviations: -1394422912.0000002
[2025-10-12 00:19:49] 2025-10-12 04:19:17,633 | INFO     | mean x: 1760240753.5
[2025-10-12 00:19:49] 2025-10-12 04:19:17,633 | INFO     | mean y: 2683259.129032258
[2025-10-12 00:19:49] 2025-10-12 04:19:17,633 | INFO     | -- intersect: 33224706969.478832
[2025-10-12 00:19:49] 2025-10-12 04:19:17,634 | INFO     | intersect: 33224706969.478832
[2025-10-12 00:19:49] 2025-10-12 04:19:17,634 | INFO     | chi2: 0.053613889095873814
[2025-10-12 00:19:49] 2025-10-12 04:19:17,634 | INFO     | -- intersect: 33224706969.478832
[2025-10-12 00:19:49] 2025-10-12 04:19:17,634 | INFO     | current memory leak: -18.87 B/s (using 62 data points, chi2=0.05)
[2025-10-12 00:19:49] 2025-10-12 04:19:17,634 | INFO     | could have reported an average CPU frequency of 2034 MHz (6 samples)
[2025-10-12 00:19:49] 2025-10-12 04:19:17,634 | INFO     | ..............................
[2025-10-12 00:19:49] 2025-10-12 04:19:17,635 | INFO     | . Timing measurements:
[2025-10-12 00:19:49] 2025-10-12 04:19:17,635 | INFO     | . get job = 0 s
[2025-10-12 00:19:49] 2025-10-12 04:19:17,635 | INFO     | . initial setup = 2 s
[2025-10-12 00:19:49] 2025-10-12 04:19:17,635 | INFO     | . payload setup = 7 s
[2025-10-12 00:19:49] 2025-10-12 04:19:17,635 | INFO     | . stage-in = 0 s
[2025-10-12 00:19:49] 2025-10-12 04:19:17,635 | INFO     | . payload execution = 4161 s
[2025-10-12 00:19:49] 2025-10-12 04:19:17,635 | INFO     | . stage-out = 0 s
[2025-10-12 00:19:49] 2025-10-12 04:19:17,635 | INFO     | . log creation = 0 s
[2025-10-12 00:19:49] 2025-10-12 04:19:17,635 | INFO     | ..............................
[2025-10-12 00:19:49] 2025-10-12 04:19:17,716 | INFO     | 
[2025-10-12 00:19:49] 2025-10-12 04:19:17,716 | INFO     | job summary report
[2025-10-12 00:19:49] 2025-10-12 04:19:17,717 | INFO     | --------------------------------------------------
[2025-10-12 00:19:49] 2025-10-12 04:19:17,717 | INFO     | PanDA job id: 6838634674
[2025-10-12 00:19:49] 2025-10-12 04:19:17,717 | INFO     | task id: 46676269
[2025-10-12 00:19:49] 2025-10-12 04:19:17,717 | INFO     | errors: (none)
[2025-10-12 00:19:49] 2025-10-12 04:19:17,717 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:19:49] 2025-10-12 04:19:17,717 | INFO     | pilot state: finished 
[2025-10-12 00:19:49] 2025-10-12 04:19:17,717 | INFO     | transexitcode: 0
[2025-10-12 00:19:49] 2025-10-12 04:19:17,718 | INFO     | exeerrorcode: 0
[2025-10-12 00:19:49] 2025-10-12 04:19:17,718 | INFO     | exeerrordiag: 
[2025-10-12 00:19:49] 2025-10-12 04:19:17,718 | INFO     | exitcode: 0
[2025-10-12 00:19:49] 2025-10-12 04:19:17,718 | INFO     | exitmsg: OK
[2025-10-12 00:19:49] 2025-10-12 04:19:17,718 | INFO     | cpuconsumptiontime: 44848 s
[2025-10-12 00:19:49] 2025-10-12 04:19:17,718 | INFO     | nevents: 400
[2025-10-12 00:19:49] 2025-10-12 04:19:17,718 | INFO     | neventsw: 0
[2025-10-12 00:19:49] 2025-10-12 04:19:17,719 | INFO     | pid: 4264
[2025-10-12 00:19:49] 2025-10-12 04:19:17,719 | INFO     | pgrp: 4264
[2025-10-12 00:19:49] 2025-10-12 04:19:17,719 | INFO     | corecount: 12
[2025-10-12 00:19:49] 2025-10-12 04:19:17,719 | INFO     | event service: False
[2025-10-12 00:19:49] 2025-10-12 04:19:17,719 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 12: 2349175, 4172: 2375070, 4173: 2384068, 4176: 2384252, 4183: 2384446}
[2025-10-12 00:19:49] 2025-10-12 04:19:17,719 | INFO     | --------------------------------------------------
[2025-10-12 00:19:49] 2025-10-12 04:19:17,719 | INFO     | 
[2025-10-12 00:19:49] 2025-10-12 04:19:17,719 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 00:19:49] 2025-10-12 04:19:17,741 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,742 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,742 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,742 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,742 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,743 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,743 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,743 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,743 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,743 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,743 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,744 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,744 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,744 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,744 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,744 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,745 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:19:49] 2025-10-12 04:19:17,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,745 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:19:49] 2025-10-12 04:19:17,745 | INFO     | job 6838634674 has completed (purged errors)
[2025-10-12 00:19:49] 2025-10-12 04:19:17,746 | INFO     | overall cleanup function is called
[2025-10-12 00:19:49] 2025-10-12 04:19:18,754 | INFO     | --- collectZombieJob: --- 10, [4264]
[2025-10-12 00:19:49] 2025-10-12 04:19:18,754 | INFO     | zombie collector waiting for pid 4264
[2025-10-12 00:19:49] 2025-10-12 04:19:18,754 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:19:49] 2025-10-12 04:19:18,755 | INFO     | collected zombie processes
[2025-10-12 00:19:49] 2025-10-12 04:19:18,755 | INFO     | will attempt to kill all subprocesses of pid=4264
[2025-10-12 00:19:49] 2025-10-12 04:19:18,844 | INFO     | process IDs to be killed: [4264] (in reverse order)
[2025-10-12 00:19:49] 2025-10-12 04:19:18,895 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:19:49] 2025-10-12 04:19:18,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:19:49] 2025-10-12 04:19:18,899 | INFO     | did not find any defunct processes belonging to 4264
[2025-10-12 00:19:49] 2025-10-12 04:19:18,901 | INFO     | did not find any defunct processes belonging to 4264
[2025-10-12 00:19:49] 2025-10-12 04:19:18,901 | INFO     | ready for new job
[2025-10-12 00:19:49] 2025-10-12 04:19:18,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:19:49] 2025-10-12 04:19:18,903 | INFO     | ***************************************
[2025-10-12 00:19:49] 2025-10-12 04:19:18,903 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:19:49] 2025-10-12 04:19:18,903 | INFO     | ***************************************
[2025-10-12 00:19:49] 2025-10-12 04:19:18,903 | INFO     | 
[2025-10-12 00:19:49] 2025-10-12 04:19:18,903 | INFO     | architecture information:
[2025-10-12 00:19:49] 2025-10-12 04:19:18,904 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:19:49] 2025-10-12 04:19:18,918 | INFO     | cat /etc/os-release:
[2025-10-12 00:19:49] NAME="CentOS Linux"
[2025-10-12 00:19:49] VERSION="7 (Core)"
[2025-10-12 00:19:49] ID="centos"
[2025-10-12 00:19:49] ID_LIKE="rhel fedora"
[2025-10-12 00:19:49] VERSION_ID="7"
[2025-10-12 00:19:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:19:49] ANSI_COLOR="0;31"
[2025-10-12 00:19:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:19:49] HOME_URL="https://www.centos.org/"
[2025-10-12 00:19:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:19:49] 
[2025-10-12 00:19:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:19:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:19:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:19:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:19:49] 
[2025-10-12 00:19:49] 2025-10-12 04:19:18,918 | INFO     | ***************************************
[2025-10-12 00:19:49] 2025-10-12 04:19:19,421 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 00:19:49] 2025-10-12 04:19:19,438 | INFO     | sufficient remaining disk space (29435625472 B)
[2025-10-12 00:19:49] 2025-10-12 04:19:19,438 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:19:49] 2025-10-12 04:19:19,439 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:19:49] 2025-10-12 04:19:19,439 | INFO     | update_server=False
[2025-10-12 00:19:49] 2025-10-12 04:19:19,439 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:19:49] 2025-10-12 04:19:19,439 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:19:49] 2025-10-12 04:19:19,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:19:49] 2025-10-12 04:19:19,591 | INFO     | all payload control threads have been joined
[2025-10-12 00:19:49] 2025-10-12 04:19:19,651 | INFO     | all job control threads have been joined
[2025-10-12 00:19:49] 2025-10-12 04:19:19,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:19:49] 2025-10-12 04:19:19,811 | INFO     | aborting loop
[2025-10-12 00:19:49] 2025-10-12 04:19:20,444 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:20,445 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:20,529 | INFO     | all data control threads have been joined
[2025-10-12 00:19:49] 2025-10-12 04:19:20,596 | INFO     | [payload] control thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:20,656 | INFO     | [job] control thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:20,817 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:21,044 | INFO     | [job] validate thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:21,133 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:21,185 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:21,253 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:21,445 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:21,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:19:49] 2025-10-12 04:19:21,534 | INFO     | [data] control thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:21,577 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:21,749 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:21,905 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:25,257 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:19:49] 2025-10-12 04:19:25,493 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:29,644 | INFO     | job.realtimelogging is not enabled
[2025-10-12 00:19:49] 2025-10-12 04:19:30,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:19:49] 2025-10-12 04:19:31,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216025073472)>', '<ExcThread(monitor, started 140215314282240)>']
[2025-10-12 00:19:49] 2025-10-12 04:19:36,402 | INFO     | all workflow threads have been joined
[2025-10-12 00:19:49] 2025-10-12 04:19:36,403 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:19:49] 2025-10-12 04:19:36,403 | INFO     | traces error code: 0
[2025-10-12 00:19:49] 2025-10-12 04:19:36,403 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:19:49] 2025-10-12 04:19:49,308 | INFO     | PID=30180 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 00:19:49] 2025-10-12 04:19:49,308 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:19:49] 2025-10-12 04:19:49,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:19:49] 2025-10-12 04:19:49,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:19:49] 2025-10-12 04:19:49,308 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:19:49] 2025-10-12 04:19:49,308 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 00:19:49] 2025-10-12 04:19:49,308 | INFO     | [monitor] control thread has ended
[2025-10-12 00:19:49] 2025-10-12 04:19:49,397 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:19:49] 2025-10-12 04:19:49,400 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:19:49] 2025-10-12 04:19:49,404 [wrapper] pilotpid: 30180
[2025-10-12 00:19:49] 2025-10-12 04:19:49,408 [wrapper] Pilot exit status: 0
[2025-10-12 00:19:49] 2025-10-12 04:19:49,424 [wrapper] pandaids: 6838634674
[2025-10-12 00:19:49] 2025-10-12 04:19:49,465 [wrapper] cleanup supervisor_pilot 10955 30181
[2025-10-12 00:19:49] 2025-10-12 04:19:49,469 [wrapper] Test setup, not cleaning
[2025-10-12 00:19:49] 2025-10-12 04:19:49,473 [wrapper] apfmon messages muted
[2025-10-12 00:19:49] 2025-10-12 04:19:49,477 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:19:49] 2025-10-12 04:19:49,481 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:19:49]  *** Error codes and diagnostics ***
[2025-10-12 00:19:49]     "exeErrorCode": 0,
[2025-10-12 00:19:49]     "exeErrorDiag": "",
[2025-10-12 00:19:49]     "pilotErrorCode": 0,
[2025-10-12 00:19:49]     "pilotErrorDiag": "",
[2025-10-12 00:19:49]  *** Listing of results directory ***
[2025-10-12 00:19:49] total 408004
[2025-10-12 00:19:49] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 13:18 pilot3.tar.gz
[2025-10-12 00:19:49] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 13:28 queuedata.json
[2025-10-12 00:19:49] -rwx------ 1 boincer umatlas     36292 Oct 11 13:30 runpilot2-wrapper.sh
[2025-10-12 00:19:49] -rw-r--r-- 1 boincer umatlas       100 Oct 11 23:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:19:49] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 23:09 run_atlas
[2025-10-12 00:19:49] -rw-r--r-- 1 boincer umatlas       105 Oct 11 23:09 job.xml
[2025-10-12 00:19:49] -rw-r--r-- 2 boincer umatlas 223329399 Oct 11 23:09 EVNT.46676267._002489.pool.root.1
[2025-10-12 00:19:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:09 start_atlas.sh
[2025-10-12 00:19:49] drwxrwx--x 2 boincer umatlas      4096 Oct 11 23:09 shared
[2025-10-12 00:19:49] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 23:09 input.tar.gz
[2025-10-12 00:19:49] -rw-r--r-- 1 boincer umatlas         0 Oct 11 23:09 boinc_lockfile
[2025-10-12 00:19:49] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 23:09 pandaJob.out
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas    975496 Oct 11 23:09 agis_schedconf.cvmfs.json
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas   1560580 Oct 11 23:09 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:19:49] drwx------ 5 boincer umatlas      4096 Oct 11 23:09 pilot3
[2025-10-12 00:19:49] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 00:13 init_data.xml
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas 188559767 Oct 12 00:18 HITS.46676269._061969.pool.root.1
[2025-10-12 00:19:49] -rw-r--r-- 1 boincer umatlas       529 Oct 12 00:18 boinc_task_state.xml
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas      1050 Oct 12 00:19 memory_monitor_summary.json
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas    390785 Oct 12 00:19 log.46676269._061969.job.log.tgz.1
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas        95 Oct 12 00:19 pilot_heartbeat.json
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas      7851 Oct 12 00:19 heartbeat.json
[2025-10-12 00:19:49] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 00:19 boinc_mmap_file
[2025-10-12 00:19:49] -rw-r--r-- 1 boincer umatlas        27 Oct 12 00:19 wrapper_checkpoint.txt
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas       815 Oct 12 00:19 pilotlog.txt
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas    613386 Oct 12 00:19 log.46676269._061969.job.log.1
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas       357 Oct 12 00:19 output.list
[2025-10-12 00:19:49] -rw-r--r-- 1 boincer umatlas       620 Oct 12 00:19 runtime_log
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas   1024000 Oct 12 00:19 result.tar.gz
[2025-10-12 00:19:49] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 00:19 runtime_log.err
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas       658 Oct 12 00:19 Bl3KDm5asR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmd6gNDmiD0AOo.diag
[2025-10-12 00:19:49] -rw-r--r-- 1 boincer umatlas     22247 Oct 12 00:19 stderr.txt
[2025-10-12 00:19:49] HITS file was successfully produced:
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas 188559767 Oct 12 00:18 shared/HITS.pool.root.1
[2025-10-12 00:19:49]  *** Contents of shared directory: ***
[2025-10-12 00:19:49] total 403820
[2025-10-12 00:19:49] -rw-r--r-- 2 boincer umatlas 223329399 Oct 11 23:09 ATLAS.root_0
[2025-10-12 00:19:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:09 start_atlas.sh
[2025-10-12 00:19:49] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 23:09 input.tar.gz
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas 188559767 Oct 12 00:18 HITS.pool.root.1
[2025-10-12 00:19:49] -rw------- 1 boincer umatlas   1024000 Oct 12 00:19 result.tar.gz
00:19:51 (24685): run_atlas exited; CPU time 44828.287242
00:19:51 (24685): called boinc_finish(0)

</stderr_txt>
]]>

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