Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:52:37 (1891625): wrapper (7.7.26015): starting
14:52:37 (1891625): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 14:52:37] Arguments: --nthreads 3
[2025-10-12 14:52:37] Threads: 3
[2025-10-12 14:52:37] Checking for CVMFS
[2025-10-12 14:52:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:52:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:52:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:52:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:52:37] 2.9.2.0 570712 4302 85216 151620 0 57 30609574 36864001 0 130560 0 3483969 99.991 148149 927 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 14:52:37] CVMFS is ok
[2025-10-12 14:52:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:52:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:52:37] Further information can be found at the LHC@home message board.
[2025-10-12 14:52:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:52:37] Checking for apptainer binary...
[2025-10-12 14:52:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:52:37] Running /usr/bin/apptainer --version
[2025-10-12 14:52:37] apptainer version 1.4.1-1.1
[2025-10-12 14:52:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:52:37] magicA161a
[2025-10-12 14:52:37] apptainer works
[2025-10-12 14:52:37] Set ATHENA_PROC_NUMBER=3
[2025-10-12 14:52:37] Set ATHENA_CORE_NUMBER=3
[2025-10-12 14:52:37] Starting ATLAS job with PandaID=6839164383
[2025-10-12 14:52:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:14:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:14:54] 2025-10-12 14:13:55,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:14:54] 2025-10-12 14:13:55,807 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:14:54] 2025-10-12 14:13:55,807 | INFO     | aborting loop
[2025-10-12 16:14:54] 2025-10-12 14:13:55,947 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:55,948 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:56,040 | INFO     | all data control threads have been joined
[2025-10-12 16:14:54] 2025-10-12 14:13:56,233 | INFO     | [job] control thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:56,280 | INFO     | all payload control threads have been joined
[2025-10-12 16:14:54] 2025-10-12 14:13:56,458 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:56,570 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:56,813 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:57,040 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:57,046 | INFO     | [data] control thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:57,126 | INFO     | [job] validate thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:57,149 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:57,229 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:57,286 | INFO     | [payload] control thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:57,432 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:57,752 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:13:58,949 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:14:05,038 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:14:54] 2025-10-12 14:14:06,044 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:14:54] 2025-10-12 14:14:47,956 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:14:54] 2025-10-12 14:14:49,606 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013346117440)>', '<ExcThread(monitor, started 140012578404096)>']
[2025-10-12 16:14:54] 2025-10-12 14:14:50,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:14:54] 2025-10-12 14:14:50,231 | INFO     | [monitor] control thread has ended
[2025-10-12 16:14:54] 2025-10-12 14:14:54,632 | INFO     | all workflow threads have been joined
[2025-10-12 16:14:54] 2025-10-12 14:14:54,632 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:14:54] 2025-10-12 14:14:54,633 | INFO     | traces error code: 0
[2025-10-12 16:14:54] 2025-10-12 14:14:54,633 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:14:54] 2025-10-12 14:14:54,682 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:14:54] 2025-10-12 14:14:54,684 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:14:54] 2025-10-12 14:14:54,686 [wrapper] pilotpid: 1895341
[2025-10-12 16:14:54] 2025-10-12 14:14:54,689 [wrapper] Pilot exit status: 0
[2025-10-12 16:14:54] 2025-10-12 14:14:54,696 [wrapper] pandaids: 6839164383
[2025-10-12 16:14:54] 2025-10-12 14:14:54,712 [wrapper] cleanup supervisor_pilot 1913650 1895342
[2025-10-12 16:14:54] 2025-10-12 14:14:54,714 [wrapper] Test setup, not cleaning
[2025-10-12 16:14:54] 2025-10-12 14:14:54,717 [wrapper] apfmon messages muted
[2025-10-12 16:14:54] 2025-10-12 14:14:54,719 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:14:54] 2025-10-12 14:14:54,722 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:14:54]  *** Error codes and diagnostics ***
[2025-10-12 16:14:54]     "exeErrorCode": 0,
[2025-10-12 16:14:54]     "exeErrorDiag": "",
[2025-10-12 16:14:54]     "pilotErrorCode": 0,
[2025-10-12 16:14:54]     "pilotErrorDiag": "",
[2025-10-12 16:14:54]  *** Listing of results directory ***
[2025-10-12 16:14:54] total 409964
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc    557409 Oct 12 02:05 pilot3.tar.gz
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc      5112 Oct 12 02:43 queuedata.json
[2025-10-12 16:14:54] -rwx------ 1 boinc boinc     36292 Oct 12 02:43 runpilot2-wrapper.sh
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc       100 Oct 12 14:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:14:54] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 14:52 run_atlas
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc       105 Oct 12 14:52 job.xml
[2025-10-12 16:14:54] -rw-r--r-- 2 boinc boinc 218970393 Oct 12 14:52 EVNT.46676267._003107.pool.root.1
[2025-10-12 16:14:54] -rw-r--r-- 2 boinc boinc    569677 Oct 12 14:52 input.tar.gz
[2025-10-12 16:14:54] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:52 start_atlas.sh
[2025-10-12 16:14:54] drwxrwx--x 2 boinc boinc      4096 Oct 12 14:52 shared
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:52 boinc_setup_complete
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc      6448 Oct 12 14:52 init_data.xml
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:52 boinc_lockfile
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc      2550 Oct 12 14:52 pandaJob.out
[2025-10-12 16:14:54] -rw------- 1 boinc boinc    975512 Oct 12 14:52 agis_schedconf.cvmfs.json
[2025-10-12 16:14:54] -rw------- 1 boinc boinc   1560580 Oct 12 14:52 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:14:54] drwx------ 5 boinc boinc      4096 Oct 12 14:52 pilot3
[2025-10-12 16:14:54] -rw------- 1 boinc boinc        95 Oct 12 16:13 pilot_heartbeat.json
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc       529 Oct 12 16:13 boinc_task_state.xml
[2025-10-12 16:14:54] -rw------- 1 boinc boinc 194977280 Oct 12 16:13 HITS.46676269._067972.pool.root.1
[2025-10-12 16:14:54] -rw------- 1 boinc boinc      1017 Oct 12 16:13 memory_monitor_summary.json
[2025-10-12 16:14:54] -rw------- 1 boinc boinc    266406 Oct 12 16:13 log.46676269._067972.job.log.tgz.1
[2025-10-12 16:14:54] -rw------- 1 boinc boinc      7758 Oct 12 16:13 heartbeat.json
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc      8192 Oct 12 16:14 boinc_mmap_file
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc        27 Oct 12 16:14 wrapper_checkpoint.txt
[2025-10-12 16:14:54] -rw------- 1 boinc boinc      4628 Oct 12 16:14 pilotlog.txt
[2025-10-12 16:14:54] -rw------- 1 boinc boinc    716332 Oct 12 16:14 log.46676269._067972.job.log.1
[2025-10-12 16:14:54] -rw------- 1 boinc boinc       357 Oct 12 16:14 output.list
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc       620 Oct 12 16:14 runtime_log
[2025-10-12 16:14:54] -rw------- 1 boinc boinc   1003520 Oct 12 16:14 result.tar.gz
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc      8797 Oct 12 16:14 runtime_log.err
[2025-10-12 16:14:54] -rw------- 1 boinc boinc       662 Oct 12 16:14 ZHNLDmOMzR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm37hNDmkheZMm.diag
[2025-10-12 16:14:54] -rw-r--r-- 1 boinc boinc      6374 Oct 12 16:14 stderr.txt
[2025-10-12 16:14:54] HITS file was successfully produced:
[2025-10-12 16:14:54] -rw------- 1 boinc boinc 194977280 Oct 12 16:13 shared/HITS.pool.root.1
[2025-10-12 16:14:54]  *** Contents of shared directory: ***
[2025-10-12 16:14:54] total 405812
[2025-10-12 16:14:54] -rw-r--r-- 2 boinc boinc 218970393 Oct 12 14:52 ATLAS.root_0
[2025-10-12 16:14:54] -rw-r--r-- 2 boinc boinc    569677 Oct 12 14:52 input.tar.gz
[2025-10-12 16:14:54] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:52 start_atlas.sh
[2025-10-12 16:14:54] -rw------- 1 boinc boinc 194977280 Oct 12 16:13 HITS.pool.root.1
[2025-10-12 16:14:54] -rw------- 1 boinc boinc   1003520 Oct 12 16:14 result.tar.gz
16:14:56 (1891625): run_atlas exited; CPU time 13926.476091
16:14:56 (1891625): called boinc_finish(0)

</stderr_txt>
]]>

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