Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:01:28 (19513): wrapper (7.7.26015): starting
23:01:28 (19513): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 23:01:28] Arguments: --nthreads 8
[2025-10-11 23:01:28] Threads: 8
[2025-10-11 23:01:28] Checking for CVMFS
[2025-10-11 23:01:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:01:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:01:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:01:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:01:28] 2.11.2.0 2913 7934 72812 151604 2 59 14986028 20275200 1 130560 0 5086232 99.989 264305 39655 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 23:01:28] CVMFS is ok
[2025-10-11 23:01:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:01:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:01:28] Further information can be found at the LHC@home message board.
[2025-10-11 23:01:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:01:28] Checking for apptainer binary...
[2025-10-11 23:01:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:01:28] Running /usr/bin/apptainer --version
[2025-10-11 23:01:28] apptainer version 1.3.2-1.el7
[2025-10-11 23:01:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:01:30] c-115-15.aglt2.org
[2025-10-11 23:01:30] apptainer works
[2025-10-11 23:01:30] Set ATHENA_PROC_NUMBER=8
[2025-10-11 23:01:30] Set ATHENA_CORE_NUMBER=8
[2025-10-11 23:01:30] Starting ATLAS job with PandaID=6839164396
[2025-10-11 23:01:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:52:03]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:52:03] 2025-10-12 04:51:06,762 | INFO     | time since job start (6560s) is within the limit (172800.0s)
[2025-10-12 00:52:03] 2025-10-12 04:51:07,262 | INFO     | monitor loop #490: job 0:6839164396 is in state 'finished'
[2025-10-12 00:52:03] 2025-10-12 04:51:07,262 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:52:03] 2025-10-12 04:51:08,765 | INFO     | time since job start (6562s) is within the limit (172800.0s)
[2025-10-12 00:52:03] 2025-10-12 04:51:08,923 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 00:52:03] 2025-10-12 04:51:08,926 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-10-12 00:52:03] 2025-10-12 04:51:08,928 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839164396/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:52:03] 2025-10-12 04:51:08,929 | INFO     | extracted standard info from prmon json
[2025-10-12 00:52:03] 2025-10-12 04:51:08,929 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 00:52:03] 2025-10-12 04:51:08,929 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:52:03] 2025-10-12 04:51:08,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:52:03] 2025-10-12 04:51:08,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:52:03] 2025-10-12 04:51:08,932 | INFO     | fitting pss+swap vs Time
[2025-10-12 00:52:03] 2025-10-12 04:51:08,933 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 00:52:03] 2025-10-12 04:51:08,933 | INFO     | sum of deviations: 7729710892.000001
[2025-10-12 00:52:03] 2025-10-12 04:51:08,934 | INFO     | mean x: 1760241370.0
[2025-10-12 00:52:03] 2025-10-12 04:51:08,934 | INFO     | mean y: 2508875.261682243
[2025-10-12 00:52:03] 2025-10-12 04:51:08,934 | INFO     | -- intersect: -35818981585.58225
[2025-10-12 00:52:03] 2025-10-12 04:51:08,934 | INFO     | intersect: -35818981585.58225
[2025-10-12 00:52:03] 2025-10-12 04:51:08,934 | INFO     | chi2: 1.4441627940822295
[2025-10-12 00:52:03] 2025-10-12 04:51:08,935 | INFO     | sum of square deviations: 329031285.5
[2025-10-12 00:52:03] 2025-10-12 04:51:08,935 | INFO     | sum of deviations: 7333714995.999996
[2025-10-12 00:52:03] 2025-10-12 04:51:08,935 | INFO     | mean x: 1760241217.5
[2025-10-12 00:52:03] 2025-10-12 04:51:08,936 | INFO     | mean y: 2507685.6666666665
[2025-10-12 00:52:03] 2025-10-12 04:51:08,936 | INFO     | -- intersect: -39231170029.022995
[2025-10-12 00:52:03] 2025-10-12 04:51:08,936 | INFO     | intersect: -39231170029.022995
[2025-10-12 00:52:03] 2025-10-12 04:51:08,936 | INFO     | chi2: 1.4470893053352831
[2025-10-12 00:52:03] 2025-10-12 04:51:08,936 | INFO     | current chi2=1.4470893053352831 (change=-0.2026441385310347 %)
[2025-10-12 00:52:03] 2025-10-12 04:51:08,936 | INFO     | right removable region: 101
[2025-10-12 00:52:03] 2025-10-12 04:51:08,937 | INFO     | sum of square deviations: 329031285.5
[2025-10-12 00:52:03] 2025-10-12 04:51:08,937 | INFO     | sum of deviations: -6993228245.999999
[2025-10-12 00:52:03] 2025-10-12 04:51:08,937 | INFO     | mean x: 1760241522.5
[2025-10-12 00:52:03] 2025-10-12 04:51:08,937 | INFO     | mean y: 2552041.862745098
[2025-10-12 00:52:03] 2025-10-12 04:51:08,937 | INFO     | -- intersect: 37414710938.00833
[2025-10-12 00:52:03] 2025-10-12 04:51:08,937 | INFO     | intersect: 37414710938.00833
[2025-10-12 00:52:03] 2025-10-12 04:51:08,938 | INFO     | chi2: 0.08344056422760714
[2025-10-12 00:52:03] 2025-10-12 04:51:08,938 | INFO     | current chi2=0.08344056422760714 (change=94.22221895138672 %)
[2025-10-12 00:52:03] 2025-10-12 04:51:08,938 | INFO     | sum of square deviations: 282974608.0
[2025-10-12 00:52:03] 2025-10-12 04:51:08,938 | INFO     | sum of deviations: -3862086168.0
[2025-10-12 00:52:03] 2025-10-12 04:51:08,939 | INFO     | mean x: 1760241675.0
[2025-10-12 00:52:03] 2025-10-12 04:51:08,939 | INFO     | mean y: 2541634.5463917525
[2025-10-12 00:52:03] 2025-10-12 04:51:08,939 | INFO     | -- intersect: 24026623065.04227
[2025-10-12 00:52:03] 2025-10-12 04:51:08,939 | INFO     | intersect: 24026623065.04227
[2025-10-12 00:52:03] 2025-10-12 04:51:08,939 | INFO     | chi2: 0.0665902950795433
[2025-10-12 00:52:03] 2025-10-12 04:51:08,939 | INFO     | current chi2=0.0665902950795433 (change=20.194337495250018 %)
[2025-10-12 00:52:03] 2025-10-12 04:51:08,939 | INFO     | left removable region: 20
[2025-10-12 00:52:03] 2025-10-12 04:51:08,940 | INFO     | sum of square deviations: 164765880.0
[2025-10-12 00:52:03] 2025-10-12 04:51:08,940 | INFO     | sum of deviations: 1027943695.9999999
[2025-10-12 00:52:03] 2025-10-12 04:51:08,940 | INFO     | mean x: 1760241797.0
[2025-10-12 00:52:03] 2025-10-12 04:51:08,940 | INFO     | mean y: 2521935.938271605
[2025-10-12 00:52:03] 2025-10-12 04:51:08,940 | INFO     | -- intersect: -10979299413.614569
[2025-10-12 00:52:03] 2025-10-12 04:51:08,940 | INFO     | intersect: -10979299413.614569
[2025-10-12 00:52:03] 2025-10-12 04:51:08,941 | INFO     | chi2: 0.0001226796168588948
[2025-10-12 00:52:03] 2025-10-12 04:51:08,941 | INFO     | -- intersect: -10979299413.614569
[2025-10-12 00:52:03] 2025-10-12 04:51:08,941 | INFO     | current memory leak: 6.24 B/s (using 81 data points, chi2=0.00)
[2025-10-12 00:52:03] 2025-10-12 04:51:08,941 | INFO     | could have reported an average CPU frequency of 2099 MHz (7 samples)
[2025-10-12 00:52:03] 2025-10-12 04:51:08,941 | INFO     | ..............................
[2025-10-12 00:52:03] 2025-10-12 04:51:08,941 | INFO     | . Timing measurements:
[2025-10-12 00:52:03] 2025-10-12 04:51:08,942 | INFO     | . get job = 0 s
[2025-10-12 00:52:03] 2025-10-12 04:51:08,942 | INFO     | . initial setup = 2 s
[2025-10-12 00:52:03] 2025-10-12 04:51:08,942 | INFO     | . payload setup = 8 s
[2025-10-12 00:52:03] 2025-10-12 04:51:08,942 | INFO     | . stage-in = 0 s
[2025-10-12 00:52:03] 2025-10-12 04:51:08,942 | INFO     | . payload execution = 6522 s
[2025-10-12 00:52:03] 2025-10-12 04:51:08,942 | INFO     | . stage-out = 0 s
[2025-10-12 00:52:03] 2025-10-12 04:51:08,942 | INFO     | . log creation = 0 s
[2025-10-12 00:52:03] 2025-10-12 04:51:08,942 | INFO     | ..............................
[2025-10-12 00:52:03] 2025-10-12 04:51:09,025 | INFO     | 
[2025-10-12 00:52:03] 2025-10-12 04:51:09,025 | INFO     | job summary report
[2025-10-12 00:52:03] 2025-10-12 04:51:09,026 | INFO     | --------------------------------------------------
[2025-10-12 00:52:03] 2025-10-12 04:51:09,026 | INFO     | PanDA job id: 6839164396
[2025-10-12 00:52:03] 2025-10-12 04:51:09,026 | INFO     | task id: 46676269
[2025-10-12 00:52:03] 2025-10-12 04:51:09,026 | INFO     | errors: (none)
[2025-10-12 00:52:03] 2025-10-12 04:51:09,026 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:52:03] 2025-10-12 04:51:09,026 | INFO     | pilot state: finished 
[2025-10-12 00:52:03] 2025-10-12 04:51:09,027 | INFO     | transexitcode: 0
[2025-10-12 00:52:03] 2025-10-12 04:51:09,027 | INFO     | exeerrorcode: 0
[2025-10-12 00:52:03] 2025-10-12 04:51:09,027 | INFO     | exeerrordiag: 
[2025-10-12 00:52:03] 2025-10-12 04:51:09,027 | INFO     | exitcode: 0
[2025-10-12 00:52:03] 2025-10-12 04:51:09,027 | INFO     | exitmsg: OK
[2025-10-12 00:52:03] 2025-10-12 04:51:09,027 | INFO     | cpuconsumptiontime: 49206 s
[2025-10-12 00:52:03] 2025-10-12 04:51:09,028 | INFO     | nevents: 400
[2025-10-12 00:52:03] 2025-10-12 04:51:09,028 | INFO     | neventsw: 0
[2025-10-12 00:52:03] 2025-10-12 04:51:09,028 | INFO     | pid: 29904
[2025-10-12 00:52:03] 2025-10-12 04:51:09,028 | INFO     | pgrp: 29904
[2025-10-12 00:52:03] 2025-10-12 04:51:09,028 | INFO     | corecount: 8
[2025-10-12 00:52:03] 2025-10-12 04:51:09,028 | INFO     | event service: False
[2025-10-12 00:52:03] 2025-10-12 04:51:09,028 | INFO     | sizes: {0: 2348806, 1: 2348806, 6: 2349096, 11: 2349124, 6533: 2376179, 6534: 2376178, 6535: 2385360, 6539: 2385416, 6545: 2385610}
[2025-10-12 00:52:03] 2025-10-12 04:51:09,029 | INFO     | --------------------------------------------------
[2025-10-12 00:52:03] 2025-10-12 04:51:09,029 | INFO     | 
[2025-10-12 00:52:03] 2025-10-12 04:51:09,029 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 00:52:03] 2025-10-12 04:51:09,055 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,056 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,056 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,056 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,057 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,057 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,057 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,057 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,058 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,058 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,058 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,058 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,058 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,059 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,059 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,059 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,059 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:52:03] 2025-10-12 04:51:09,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,060 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:52:03] 2025-10-12 04:51:09,060 | INFO     | job 6839164396 has completed (purged errors)
[2025-10-12 00:52:03] 2025-10-12 04:51:09,060 | INFO     | overall cleanup function is called
[2025-10-12 00:52:03] 2025-10-12 04:51:10,069 | INFO     | --- collectZombieJob: --- 10, [29904]
[2025-10-12 00:52:03] 2025-10-12 04:51:10,069 | INFO     | zombie collector waiting for pid 29904
[2025-10-12 00:52:03] 2025-10-12 04:51:10,074 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:52:03] 2025-10-12 04:51:10,075 | INFO     | collected zombie processes
[2025-10-12 00:52:03] 2025-10-12 04:51:10,075 | INFO     | will attempt to kill all subprocesses of pid=29904
[2025-10-12 00:52:03] 2025-10-12 04:51:10,157 | INFO     | process IDs to be killed: [29904] (in reverse order)
[2025-10-12 00:52:03] 2025-10-12 04:51:10,213 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:52:03] 2025-10-12 04:51:10,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:52:03] 2025-10-12 04:51:10,217 | INFO     | did not find any defunct processes belonging to 29904
[2025-10-12 00:52:03] 2025-10-12 04:51:10,220 | INFO     | did not find any defunct processes belonging to 29904
[2025-10-12 00:52:03] 2025-10-12 04:51:10,220 | INFO     | ready for new job
[2025-10-12 00:52:03] 2025-10-12 04:51:10,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:52:03] 2025-10-12 04:51:10,221 | INFO     | ***************************************
[2025-10-12 00:52:03] 2025-10-12 04:51:10,221 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:52:03] 2025-10-12 04:51:10,222 | INFO     | ***************************************
[2025-10-12 00:52:03] 2025-10-12 04:51:10,222 | INFO     | 
[2025-10-12 00:52:03] 2025-10-12 04:51:10,222 | INFO     | architecture information:
[2025-10-12 00:52:03] 2025-10-12 04:51:10,223 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:52:03] 2025-10-12 04:51:10,241 | INFO     | cat /etc/os-release:
[2025-10-12 00:52:03] NAME="CentOS Linux"
[2025-10-12 00:52:03] VERSION="7 (Core)"
[2025-10-12 00:52:03] ID="centos"
[2025-10-12 00:52:03] ID_LIKE="rhel fedora"
[2025-10-12 00:52:03] VERSION_ID="7"
[2025-10-12 00:52:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:52:03] ANSI_COLOR="0;31"
[2025-10-12 00:52:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:52:03] HOME_URL="https://www.centos.org/"
[2025-10-12 00:52:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:52:03] 
[2025-10-12 00:52:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:52:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:52:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:52:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:52:03] 
[2025-10-12 00:52:03] 2025-10-12 04:51:10,241 | INFO     | ***************************************
[2025-10-12 00:52:03] 2025-10-12 04:51:10,744 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 00:52:03] 2025-10-12 04:51:10,763 | INFO     | sufficient remaining disk space (18592301056 B)
[2025-10-12 00:52:03] 2025-10-12 04:51:10,764 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:52:03] 2025-10-12 04:51:10,764 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:52:03] 2025-10-12 04:51:10,764 | INFO     | update_server=False
[2025-10-12 00:52:03] 2025-10-12 04:51:10,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:52:03] 2025-10-12 04:51:10,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:52:03] 2025-10-12 04:51:10,766 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 00:52:03] 2025-10-12 04:51:10,766 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:52:03] 2025-10-12 04:51:10,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:52:03] 2025-10-12 04:51:10,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:52:03] 2025-10-12 04:51:10,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:52:03] 2025-10-12 04:51:10,769 | INFO     | aborting loop
[2025-10-12 00:52:03] 2025-10-12 04:51:10,842 | INFO     | all data control threads have been joined
[2025-10-12 00:52:03] 2025-10-12 04:51:11,015 | INFO     | all job control threads have been joined
[2025-10-12 00:52:03] 2025-10-12 04:51:11,521 | INFO     | all payload control threads have been joined
[2025-10-12 00:52:03] 2025-10-12 04:51:11,770 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:11,771 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:11,771 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:11,786 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:11,848 | INFO     | [data] control thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:11,854 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:11,892 | INFO     | [job] validate thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:11,914 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:11,997 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:12,017 | INFO     | [job] control thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:12,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:52:03] 2025-10-12 04:51:12,466 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:12,527 | INFO     | [payload] control thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:12,708 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:12,870 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:13,007 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:52:03] 2025-10-12 04:51:14,122 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:17,013 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:52:03] 2025-10-12 04:51:56,985 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:52:03] 2025-10-12 04:51:57,991 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139902311814976)>', '<ExcThread(monitor, started 139901999748864)>']
[2025-10-12 00:52:03] 2025-10-12 04:51:57,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:52:03] 2025-10-12 04:51:57,994 | INFO     | [monitor] control thread has ended
[2025-10-12 00:52:03] 2025-10-12 04:52:02,997 | INFO     | all workflow threads have been joined
[2025-10-12 00:52:03] 2025-10-12 04:52:02,997 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:52:03] 2025-10-12 04:52:02,998 | INFO     | traces error code: 0
[2025-10-12 00:52:03] 2025-10-12 04:52:02,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:52:03] 2025-10-12 04:52:03,105 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:52:03] 2025-10-12 04:52:03,109 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:52:03] 2025-10-12 04:52:03,114 [wrapper] pilotpid: 23355
[2025-10-12 00:52:03] 2025-10-12 04:52:03,118 [wrapper] Pilot exit status: 0
[2025-10-12 00:52:03] 2025-10-12 04:52:03,136 [wrapper] pandaids: 6839164396
[2025-10-12 00:52:03] 2025-10-12 04:52:03,184 [wrapper] cleanup supervisor_pilot 29659 23356
[2025-10-12 00:52:03] 2025-10-12 04:52:03,188 [wrapper] Test setup, not cleaning
[2025-10-12 00:52:03] 2025-10-12 04:52:03,193 [wrapper] apfmon messages muted
[2025-10-12 00:52:03] 2025-10-12 04:52:03,197 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:52:03] 2025-10-12 04:52:03,202 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:52:03]  *** Error codes and diagnostics ***
[2025-10-12 00:52:03]     "exeErrorCode": 0,
[2025-10-12 00:52:03]     "exeErrorDiag": "",
[2025-10-12 00:52:03]     "pilotErrorCode": 0,
[2025-10-12 00:52:03]     "pilotErrorDiag": "",
[2025-10-12 00:52:03]  *** Listing of results directory ***
[2025-10-12 00:52:03] total 408604
[2025-10-12 00:52:03] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 20:05 pilot3.tar.gz
[2025-10-12 00:52:03] -rwx------ 1 boincer umatlas     36292 Oct 11 20:41 runpilot2-wrapper.sh
[2025-10-12 00:52:03] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 20:41 queuedata.json
[2025-10-12 00:52:03] -rw-r--r-- 1 boincer umatlas       100 Oct 11 23:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:52:03] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 23:01 run_atlas
[2025-10-12 00:52:03] -rw-r--r-- 1 boincer umatlas       105 Oct 11 23:01 job.xml
[2025-10-12 00:52:03] -rw-r--r-- 2 boincer umatlas 219577626 Oct 11 23:01 EVNT.46676267._003108.pool.root.1
[2025-10-12 00:52:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:01 start_atlas.sh
[2025-10-12 00:52:03] drwxrwx--x 2 boincer umatlas      4096 Oct 11 23:01 shared
[2025-10-12 00:52:03] -rw-r--r-- 2 boincer umatlas    569671 Oct 11 23:01 input.tar.gz
[2025-10-12 00:52:03] -rw-r--r-- 1 boincer umatlas         0 Oct 11 23:01 boinc_lockfile
[2025-10-12 00:52:03] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 23:01 pandaJob.out
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas    975496 Oct 11 23:01 agis_schedconf.cvmfs.json
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas   1560580 Oct 11 23:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:52:03] drwx------ 5 boincer umatlas      4096 Oct 11 23:01 pilot3
[2025-10-12 00:52:03] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 00:48 init_data.xml
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas        95 Oct 12 00:50 pilot_heartbeat.json
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas 192362457 Oct 12 00:50 HITS.46676269._067985.pool.root.1
[2025-10-12 00:52:03] -rw-r--r-- 1 boincer umatlas       529 Oct 12 00:50 boinc_task_state.xml
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas      1050 Oct 12 00:50 memory_monitor_summary.json
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas    353326 Oct 12 00:50 log.46676269._067985.job.log.tgz.1
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas      7842 Oct 12 00:51 heartbeat.json
[2025-10-12 00:52:03] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 00:51 boinc_mmap_file
[2025-10-12 00:52:03] -rw-r--r-- 1 boincer umatlas        27 Oct 12 00:51 wrapper_checkpoint.txt
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas      4552 Oct 12 00:52 pilotlog.txt
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas    931119 Oct 12 00:52 log.46676269._067985.job.log.1
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas       357 Oct 12 00:52 output.list
[2025-10-12 00:52:03] -rw-r--r-- 1 boincer umatlas       620 Oct 12 00:52 runtime_log
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas   1300480 Oct 12 00:52 result.tar.gz
[2025-10-12 00:52:03] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 00:52 runtime_log.err
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas       659 Oct 12 00:52 7qKODmQKzR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmQtSMDm8rp8qm.diag
[2025-10-12 00:52:03] -rw-r--r-- 1 boincer umatlas     21046 Oct 12 00:52 stderr.txt
[2025-10-12 00:52:03] HITS file was successfully produced:
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas 192362457 Oct 12 00:50 shared/HITS.pool.root.1
[2025-10-12 00:52:03]  *** Contents of shared directory: ***
[2025-10-12 00:52:03] total 404140
[2025-10-12 00:52:03] -rw-r--r-- 2 boincer umatlas 219577626 Oct 11 23:01 ATLAS.root_0
[2025-10-12 00:52:03] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:01 start_atlas.sh
[2025-10-12 00:52:03] -rw-r--r-- 2 boincer umatlas    569671 Oct 11 23:01 input.tar.gz
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas 192362457 Oct 12 00:50 HITS.pool.root.1
[2025-10-12 00:52:03] -rw------- 1 boincer umatlas   1300480 Oct 12 00:52 result.tar.gz
00:52:04 (19513): run_atlas exited; CPU time 49213.685189
00:52:04 (19513): called boinc_finish(0)

</stderr_txt>
]]>

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