Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:00:03 (5432): wrapper (7.7.26015): starting
23:00:03 (5432): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 23:00:03] Arguments: --nthreads 8
[2025-10-11 23:00:03] Threads: 8
[2025-10-11 23:00:03] Checking for CVMFS
[2025-10-11 23:00:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:00:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:00:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:00:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:00:04] 2.11.2.0 3213 627250 247188 151604 3 188 20159826 20275201 917 130560 1 357204196 99.992 26040579 20162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 23:00:04] CVMFS is ok
[2025-10-11 23:00:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:00:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:00:04] Further information can be found at the LHC@home message board.
[2025-10-11 23:00:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:00:04] Checking for apptainer binary...
[2025-10-11 23:00:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:00:04] Running /usr/bin/apptainer --version
[2025-10-11 23:00:04] apptainer version 1.3.2-1.el7
[2025-10-11 23:00:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:00:04] c-205-38.aglt2.org
[2025-10-11 23:00:04] apptainer works
[2025-10-11 23:00:04] Set ATHENA_PROC_NUMBER=8
[2025-10-11 23:00:04] Set ATHENA_CORE_NUMBER=8
[2025-10-11 23:00:04] Starting ATLAS job with PandaID=6839164343
[2025-10-11 23:00:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:56:41]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:56:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 23:56:41]  replicas=None
[2025-10-11 23:56:41]  scope=mc23_13p6TeV
[2025-10-11 23:56:41]  status=None
[2025-10-11 23:56:41]  status_code=0
[2025-10-11 23:56:41]  storage_token=
[2025-10-11 23:56:41]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6839164343/log.46676269._067932.job.log.tgz.1
[2025-10-11 23:56:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/33/log.46676269._067932.job.log.tgz.1
[2025-10-11 23:56:41]  workdir=None
[2025-10-11 23:56:41] ]
[2025-10-11 23:56:41] 2025-10-12 03:56:04,172 | INFO     | transferring file log.46676269._067932.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6839164343/log.46676269._067932.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 23:56:41] 2025-10-12 03:56:04,173 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6839164343/log.46676269._067932.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._067932.job
[2025-10-11 23:56:41] 2025-10-12 03:56:04,189 | INFO     | adding to output.list: log.46676269._067932.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1c/33/log.46676269._067932.job.log.tg
[2025-10-11 23:56:41] 2025-10-12 03:56:04,190 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 23:56:41] 2025-10-12 03:56:04,190 | INFO     | summary of transferred files:
[2025-10-11 23:56:41] 2025-10-12 03:56:04,190 | INFO     |  -- lfn=log.46676269._067932.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 23:56:41] 2025-10-12 03:56:04,190 | INFO     | stage-out finished correctly
[2025-10-11 23:56:41] 2025-10-12 03:56:04,234 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 23:56:41] 2025-10-12 03:56:04,561 | INFO     | time since job start (3351s) is within the limit (172800.0s)
[2025-10-11 23:56:41] 2025-10-12 03:56:06,566 | INFO     | time since job start (3353s) is within the limit (172800.0s)
[2025-10-11 23:56:41] 2025-10-12 03:56:06,903 | INFO     | job 6839164343 has state=finished
[2025-10-11 23:56:41] 2025-10-12 03:56:06,903 | INFO     | preparing for final server update for job 6839164343 in state='finished'
[2025-10-11 23:56:41] 2025-10-12 03:56:06,977 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-11 23:56:41] 2025-10-12 03:56:06,978 | INFO     | this job has now completed (state=finished)
[2025-10-11 23:56:41] 2025-10-12 03:56:06,978 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 23:56:41] 2025-10-12 03:56:06,978 | INFO     | log transfer has been attempted: DONE
[2025-10-11 23:56:41] 2025-10-12 03:56:06,978 | INFO     | job 6839164343 has finished - writing final server update
[2025-10-11 23:56:41] 2025-10-12 03:56:06,978 | INFO     | total number of processed events: 400 (read)
[2025-10-11 23:56:41] 2025-10-12 03:56:06,979 | INFO     | executing command: lscpu
[2025-10-11 23:56:41] 2025-10-12 03:56:07,007 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 23:56:41] 2025-10-12 03:56:08,571 | INFO     | time since job start (3355s) is within the limit (172800.0s)
[2025-10-11 23:56:41] 2025-10-12 03:56:09,465 | WARNING  | process 15625 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 23:56:41] 2025-10-12 03:56:09,465 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6839164343/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:56:41] 2025-10-12 03:56:09,519 | INFO     | number of running child processes to parent process 15625: 1
[2025-10-11 23:56:41] 2025-10-12 03:56:09,520 | INFO     | maximum number of monitored processes: 6
[2025-10-11 23:56:41] 2025-10-12 03:56:10,331 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 23:56:41] 2025-10-12 03:56:10,333 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2716.0517499999996
[2025-10-11 23:56:41] 2025-10-12 03:56:10,335 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6839164343/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:56:41] 2025-10-12 03:56:10,336 | INFO     | extracted standard info from prmon json
[2025-10-11 23:56:41] 2025-10-12 03:56:10,336 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:56:41] 2025-10-12 03:56:10,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:56:41] 2025-10-12 03:56:10,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:56:41] 2025-10-12 03:56:10,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:56:41] 2025-10-12 03:56:10,337 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:56:41] 2025-10-12 03:56:10,338 | INFO     | sum of square deviations: 34277852.0
[2025-10-11 23:56:41] 2025-10-12 03:56:10,338 | INFO     | sum of deviations: -1769280386.4999998
[2025-10-11 23:56:41] 2025-10-12 03:56:10,338 | INFO     | mean x: 1760239771.5
[2025-10-11 23:56:41] 2025-10-12 03:56:10,338 | INFO     | mean y: 2552144.8541666665
[2025-10-11 23:56:41] 2025-10-12 03:56:10,338 | INFO     | -- intersect: 90858820012.86967
[2025-10-11 23:56:41] 2025-10-12 03:56:10,338 | INFO     | intersect: 90858820012.86967
[2025-10-11 23:56:41] 2025-10-12 03:56:10,338 | INFO     | chi2: 0.012597940782027443
[2025-10-11 23:56:41] 2025-10-12 03:56:10,338 | INFO     | -- intersect: 90858820012.86967
[2025-10-11 23:56:41] 2025-10-12 03:56:10,338 | INFO     | current memory leak: -51.62 B/s (using 48 data points, chi2=0.01)
[2025-10-11 23:56:41] 2025-10-12 03:56:10,339 | INFO     | could have reported an average CPU frequency of 2830 MHz (5 samples)
[2025-10-11 23:56:41] 2025-10-12 03:56:10,339 | INFO     | ..............................
[2025-10-11 23:56:41] 2025-10-12 03:56:10,339 | INFO     | . Timing measurements:
[2025-10-11 23:56:41] 2025-10-12 03:56:10,339 | INFO     | . get job = 0 s
[2025-10-11 23:56:41] 2025-10-12 03:56:10,339 | INFO     | . initial setup = 2 s
[2025-10-11 23:56:41] 2025-10-12 03:56:10,339 | INFO     | . payload setup = 3 s
[2025-10-11 23:56:41] 2025-10-12 03:56:10,339 | INFO     | . stage-in = 0 s
[2025-10-11 23:56:41] 2025-10-12 03:56:10,339 | INFO     | . payload execution = 3329 s
[2025-10-11 23:56:41] 2025-10-12 03:56:10,339 | INFO     | . stage-out = 0 s
[2025-10-11 23:56:41] 2025-10-12 03:56:10,339 | INFO     | . log creation = 0 s
[2025-10-11 23:56:41] 2025-10-12 03:56:10,339 | INFO     | ..............................
[2025-10-11 23:56:41] 2025-10-12 03:56:10,391 | INFO     | 
[2025-10-11 23:56:41] 2025-10-12 03:56:10,392 | INFO     | job summary report
[2025-10-11 23:56:41] 2025-10-12 03:56:10,392 | INFO     | --------------------------------------------------
[2025-10-11 23:56:41] 2025-10-12 03:56:10,392 | INFO     | PanDA job id: 6839164343
[2025-10-11 23:56:41] 2025-10-12 03:56:10,392 | INFO     | task id: 46676269
[2025-10-11 23:56:41] 2025-10-12 03:56:10,392 | INFO     | errors: (none)
[2025-10-11 23:56:41] 2025-10-12 03:56:10,392 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:56:41] 2025-10-12 03:56:10,392 | INFO     | pilot state: finished 
[2025-10-11 23:56:41] 2025-10-12 03:56:10,392 | INFO     | transexitcode: 0
[2025-10-11 23:56:41] 2025-10-12 03:56:10,393 | INFO     | exeerrorcode: 0
[2025-10-11 23:56:41] 2025-10-12 03:56:10,393 | INFO     | exeerrordiag: 
[2025-10-11 23:56:41] 2025-10-12 03:56:10,393 | INFO     | exitcode: 0
[2025-10-11 23:56:41] 2025-10-12 03:56:10,393 | INFO     | exitmsg: OK
[2025-10-11 23:56:41] 2025-10-12 03:56:10,393 | INFO     | cpuconsumptiontime: 24546 s
[2025-10-11 23:56:41] 2025-10-12 03:56:10,393 | INFO     | nevents: 400
[2025-10-11 23:56:41] 2025-10-12 03:56:10,393 | INFO     | neventsw: 0
[2025-10-11 23:56:41] 2025-10-12 03:56:10,393 | INFO     | pid: 15625
[2025-10-11 23:56:41] 2025-10-12 03:56:10,393 | INFO     | pgrp: 15625
[2025-10-11 23:56:41] 2025-10-12 03:56:10,393 | INFO     | corecount: 8
[2025-10-11 23:56:41] 2025-10-12 03:56:10,394 | INFO     | event service: False
[2025-10-11 23:56:41] 2025-10-12 03:56:10,394 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 3337: 2374845, 3338: 2383899, 3344: 2384069}
[2025-10-11 23:56:41] 2025-10-12 03:56:10,394 | INFO     | --------------------------------------------------
[2025-10-11 23:56:41] 2025-10-12 03:56:10,394 | INFO     | 
[2025-10-11 23:56:41] 2025-10-12 03:56:10,394 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 23:56:41] 2025-10-12 03:56:10,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,415 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,415 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,416 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:56:41] 2025-10-12 03:56:10,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:56:41] 2025-10-12 03:56:10,417 | INFO     | job 6839164343 has completed (purged errors)
[2025-10-11 23:56:41] 2025-10-12 03:56:10,417 | INFO     | overall cleanup function is called
[2025-10-11 23:56:41] 2025-10-12 03:56:11,425 | INFO     | --- collectZombieJob: --- 10, [15625]
[2025-10-11 23:56:41] 2025-10-12 03:56:11,425 | INFO     | zombie collector waiting for pid 15625
[2025-10-11 23:56:41] 2025-10-12 03:56:11,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:56:41] 2025-10-12 03:56:11,426 | INFO     | collected zombie processes
[2025-10-11 23:56:41] 2025-10-12 03:56:11,426 | INFO     | will attempt to kill all subprocesses of pid=15625
[2025-10-11 23:56:41] 2025-10-12 03:56:11,532 | INFO     | process IDs to be killed: [15625] (in reverse order)
[2025-10-11 23:56:41] 2025-10-12 03:56:11,578 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:56:41] 2025-10-12 03:56:11,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:56:41] 2025-10-12 03:56:11,581 | INFO     | did not find any defunct processes belonging to 15625
[2025-10-11 23:56:41] 2025-10-12 03:56:11,583 | INFO     | did not find any defunct processes belonging to 15625
[2025-10-11 23:56:41] 2025-10-12 03:56:11,583 | INFO     | ready for new job
[2025-10-11 23:56:41] 2025-10-12 03:56:11,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:56:41] 2025-10-12 03:56:11,585 | INFO     | ***************************************
[2025-10-11 23:56:41] 2025-10-12 03:56:11,585 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:56:41] 2025-10-12 03:56:11,585 | INFO     | ***************************************
[2025-10-11 23:56:41] 2025-10-12 03:56:11,585 | INFO     | 
[2025-10-11 23:56:41] 2025-10-12 03:56:11,586 | INFO     | architecture information:
[2025-10-11 23:56:41] 2025-10-12 03:56:11,587 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:56:41] 2025-10-12 03:56:11,599 | INFO     | cat /etc/os-release:
[2025-10-11 23:56:41] NAME="CentOS Linux"
[2025-10-11 23:56:41] VERSION="7 (Core)"
[2025-10-11 23:56:41] ID="centos"
[2025-10-11 23:56:41] ID_LIKE="rhel fedora"
[2025-10-11 23:56:41] VERSION_ID="7"
[2025-10-11 23:56:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:56:41] ANSI_COLOR="0;31"
[2025-10-11 23:56:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:56:41] HOME_URL="https://www.centos.org/"
[2025-10-11 23:56:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:56:41] 
[2025-10-11 23:56:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:56:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:56:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:56:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:56:41] 
[2025-10-11 23:56:41] 2025-10-12 03:56:11,599 | INFO     | ***************************************
[2025-10-11 23:56:41] 2025-10-12 03:56:12,102 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 23:56:41] 2025-10-12 03:56:12,120 | INFO     | sufficient remaining disk space (32718716928 B)
[2025-10-11 23:56:41] 2025-10-12 03:56:12,121 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:56:41] 2025-10-12 03:56:12,121 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:56:41] 2025-10-12 03:56:12,121 | INFO     | update_server=False
[2025-10-11 23:56:41] 2025-10-12 03:56:12,121 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:56:41] 2025-10-12 03:56:12,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:56:41] 2025-10-12 03:56:12,243 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:56:41] 2025-10-12 03:56:12,345 | INFO     | all data control threads have been joined
[2025-10-11 23:56:41] 2025-10-12 03:56:12,454 | INFO     | all payload control threads have been joined
[2025-10-11 23:56:41] 2025-10-12 03:56:13,028 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:56:41] 2025-10-12 03:56:13,028 | INFO     | aborting loop
[2025-10-11 23:56:41] 2025-10-12 03:56:13,126 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:13,127 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:13,298 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:13,350 | INFO     | [data] control thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:13,456 | INFO     | [payload] control thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:13,749 | INFO     | all job control threads have been joined
[2025-10-11 23:56:41] 2025-10-12 03:56:13,989 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:14,034 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:14,199 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:14,247 | INFO     | [job] validate thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:14,248 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:14,402 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:14,607 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:14,726 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:14,755 | INFO     | [job] control thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:14,815 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:56:41] 2025-10-12 03:56:17,944 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:56:41] 2025-10-12 03:56:18,821 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:22,852 | INFO     | job.realtimelogging is not enabled
[2025-10-11 23:56:41] 2025-10-12 03:56:23,858 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:56:41] 2025-10-12 03:56:25,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804549125952)>', '<ExcThread(monitor, started 139804121487104)>']
[2025-10-11 23:56:41] 2025-10-12 03:56:30,991 | INFO     | all workflow threads have been joined
[2025-10-11 23:56:41] 2025-10-12 03:56:30,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:56:41] 2025-10-12 03:56:30,992 | INFO     | traces error code: 0
[2025-10-11 23:56:41] 2025-10-12 03:56:30,992 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:56:41] 2025-10-12 03:56:41,763 | INFO     | PID=9117 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 23:56:41] 2025-10-12 03:56:41,764 | INFO     | .. there are 2 such processes running
[2025-10-11 23:56:41] 2025-10-12 03:56:41,764 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:56:41] 2025-10-12 03:56:41,764 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:56:41] 2025-10-12 03:56:41,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:56:41] 2025-10-12 03:56:41,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:56:41] 2025-10-12 03:56:41,765 | INFO     | [monitor] control thread has ended
[2025-10-11 23:56:41] 2025-10-12 03:56:41,843 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:56:41] 2025-10-12 03:56:41,846 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:56:41] 2025-10-12 03:56:41,849 [wrapper] pilotpid: 9117
[2025-10-11 23:56:41] 2025-10-12 03:56:41,852 [wrapper] Pilot exit status: 0
[2025-10-11 23:56:41] 2025-10-12 03:56:41,863 [wrapper] pandaids: 6839164343
[2025-10-11 23:56:41] 2025-10-12 03:56:41,883 [wrapper] cleanup supervisor_pilot 22216 9118
[2025-10-11 23:56:41] 2025-10-12 03:56:41,886 [wrapper] Test setup, not cleaning
[2025-10-11 23:56:41] 2025-10-12 03:56:41,889 [wrapper] apfmon messages muted
[2025-10-11 23:56:41] 2025-10-12 03:56:41,891 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:56:41] 2025-10-12 03:56:41,894 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:56:41]  *** Error codes and diagnostics ***
[2025-10-11 23:56:41]     "exeErrorCode": 0,
[2025-10-11 23:56:41]     "exeErrorDiag": "",
[2025-10-11 23:56:41]     "pilotErrorCode": 0,
[2025-10-11 23:56:41]     "pilotErrorDiag": "",
[2025-10-11 23:56:41]  *** Listing of results directory ***
[2025-10-11 23:56:41] total 419124
[2025-10-11 23:56:41] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 20:05 pilot3.tar.gz
[2025-10-11 23:56:41] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 20:38 queuedata.json
[2025-10-11 23:56:41] -rwx------ 1 boincer umatlas     36292 Oct 11 20:40 runpilot2-wrapper.sh
[2025-10-11 23:56:41] -rw-r--r-- 1 boincer umatlas       100 Oct 11 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:56:41] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 23:00 run_atlas
[2025-10-11 23:56:41] -rw-r--r-- 1 boincer umatlas       105 Oct 11 23:00 job.xml
[2025-10-11 23:56:41] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 23:00 input.tar.gz
[2025-10-11 23:56:41] -rw-r--r-- 2 boincer umatlas 223809058 Oct 11 23:00 EVNT.46676267._003105.pool.root.1
[2025-10-11 23:56:41] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:00 start_atlas.sh
[2025-10-11 23:56:41] drwxrwx--x 2 boincer umatlas      4096 Oct 11 23:00 shared
[2025-10-11 23:56:41] -rw-r--r-- 1 boincer umatlas         0 Oct 11 23:00 boinc_lockfile
[2025-10-11 23:56:41] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 23:00 pandaJob.out
[2025-10-11 23:56:41] -rw------- 1 boincer umatlas    975496 Oct 11 23:00 agis_schedconf.cvmfs.json
[2025-10-11 23:56:41] -rw------- 1 boincer umatlas   1560580 Oct 11 23:00 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:56:41] drwx------ 5 boincer umatlas      4096 Oct 11 23:00 pilot3
[2025-10-11 23:56:41] -rw------- 1 boincer umatlas 199827521 Oct 11 23:55 HITS.46676269._067932.pool.root.1
[2025-10-11 23:56:41] -rw-r--r-- 1 boincer umatlas       530 Oct 11 23:55 boinc_task_state.xml
[2025-10-11 23:56:41] -rw------- 1 boincer umatlas      1044 Oct 11 23:56 memory_monitor_summary.json
[2025-10-11 23:56:41] -rw------- 1 boincer umatlas    305945 Oct 11 23:56 log.46676269._067932.job.log.tgz.1
[2025-10-11 23:56:41] -rw------- 1 boincer umatlas      7834 Oct 11 23:56 heartbeat.json
[2025-10-11 23:56:41] -rw-r--r-- 1 boincer umatlas      6134 Oct 11 23:56 init_data.xml
[2025-10-11 23:56:41] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 23:56 boinc_mmap_file
[2025-10-11 23:56:41] -rw-r--r-- 1 boincer umatlas        27 Oct 11 23:56 wrapper_checkpoint.txt
[2025-10-11 23:56:41] -rw------- 1 boincer umatlas       819 Oct 11 23:56 pilotlog.txt
[2025-10-11 23:56:41] -rw------- 1 boincer umatlas        95 Oct 11 23:56 pilot_heartbeat.json
[2025-10-11 23:56:41] -rw------- 1 boincer umatlas    517621 Oct 11 23:56 log.46676269._067932.job.log.1
[2025-10-11 23:56:41] -rw------- 1 boincer umatlas       357 Oct 11 23:56 output.list
[2025-10-11 23:56:41] -rw-r--r-- 1 boincer umatlas       620 Oct 11 23:56 runtime_log
[2025-10-11 23:56:41] -rw------- 1 boincer umatlas    839680 Oct 11 23:56 result.tar.gz
[2025-10-11 23:56:41] -rw------- 1 boincer umatlas       655 Oct 11 23:56 ykGNDmSJzR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmq6hNDmMdzYom.diag
[2025-10-11 23:56:41] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 23:56 runtime_log.err
[2025-10-11 23:56:41] -rw-r--r-- 1 boincer umatlas     21794 Oct 11 23:56 stderr.txt
[2025-10-11 23:56:42] HITS file was successfully produced:
[2025-10-11 23:56:42] -rw------- 1 boincer umatlas 199827521 Oct 11 23:55 shared/HITS.pool.root.1
[2025-10-11 23:56:42]  *** Contents of shared directory: ***
[2025-10-11 23:56:42] total 415116
[2025-10-11 23:56:42] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 23:00 input.tar.gz
[2025-10-11 23:56:42] -rw-r--r-- 2 boincer umatlas 223809058 Oct 11 23:00 ATLAS.root_0
[2025-10-11 23:56:42] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:00 start_atlas.sh
[2025-10-11 23:56:42] -rw------- 1 boincer umatlas 199827521 Oct 11 23:55 HITS.pool.root.1
[2025-10-11 23:56:42] -rw------- 1 boincer umatlas    839680 Oct 11 23:56 result.tar.gz
23:56:43 (5432): run_atlas exited; CPU time 24507.880191
23:56:43 (5432): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN