Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:05:05 (12585): wrapper (7.7.26015): starting
23:05:05 (12585): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 23:05:05] Arguments: --nthreads 8
[2025-10-11 23:05:05] Threads: 8
[2025-10-11 23:05:05] Checking for CVMFS
[2025-10-11 23:05:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:05:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:05:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:05:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:05:06] 2.11.2.0 2923 205281 79116 151604 1 59 14905940 20275200 1 130560 3 73007671 99.976 10716043 9982 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 23:05:06] CVMFS is ok
[2025-10-11 23:05:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:05:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:05:06] Further information can be found at the LHC@home message board.
[2025-10-11 23:05:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:05:06] Checking for apptainer binary...
[2025-10-11 23:05:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:05:06] Running /usr/bin/apptainer --version
[2025-10-11 23:05:06] apptainer version 1.3.2-1.el7
[2025-10-11 23:05:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:05:08] c-204-28.aglt2.org
[2025-10-11 23:05:08] apptainer works
[2025-10-11 23:05:08] Set ATHENA_PROC_NUMBER=8
[2025-10-11 23:05:08] Set ATHENA_CORE_NUMBER=8
[2025-10-11 23:05:08] Starting ATLAS job with PandaID=6839164309
[2025-10-11 23:05:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:10:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:10:04] 2025-10-12 05:09:31,308 | INFO     | intersect: -16254909319.840322
[2025-10-12 01:10:04] 2025-10-12 05:09:31,308 | INFO     | chi2: 2.205781859403864
[2025-10-12 01:10:04] 2025-10-12 05:09:31,308 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,309 | INFO     | sum of deviations: 12738169083.999998
[2025-10-12 01:10:04] 2025-10-12 05:09:31,309 | INFO     | mean x: 1760241895.0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,309 | INFO     | mean y: 2473220.111111111
[2025-10-12 01:10:04] 2025-10-12 05:09:31,310 | INFO     | -- intersect: -45149328027.495895
[2025-10-12 01:10:04] 2025-10-12 05:09:31,310 | INFO     | intersect: -45149328027.495895
[2025-10-12 01:10:04] 2025-10-12 05:09:31,310 | INFO     | chi2: 1.4372821946637269
[2025-10-12 01:10:04] 2025-10-12 05:09:31,310 | INFO     | current chi2=1.4372821946637269 (change=34.84023868742091 %)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,311 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,311 | INFO     | sum of deviations: 12094961141.500002
[2025-10-12 01:10:04] 2025-10-12 05:09:31,312 | INFO     | mean x: 1760241742.5
[2025-10-12 01:10:04] 2025-10-12 05:09:31,312 | INFO     | mean y: 2471611.3839285714
[2025-10-12 01:10:04] 2025-10-12 05:09:31,312 | INFO     | -- intersect: -48871645389.39309
[2025-10-12 01:10:04] 2025-10-12 05:09:31,312 | INFO     | sufficient remaining disk space (18550358016 B)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,313 | INFO     | intersect: -48871645389.39309
[2025-10-12 01:10:04] 2025-10-12 05:09:31,313 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,313 | INFO     | chi2: 1.4399844251586238
[2025-10-12 01:10:04] 2025-10-12 05:09:31,314 | INFO     | current chi2=1.4399844251586238 (change=-0.18800973844451996 %)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,314 | INFO     | right removable region: 111
[2025-10-12 01:10:04] 2025-10-12 05:09:31,315 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,315 | INFO     | sum of deviations: -11562340770.0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,316 | INFO     | mean x: 1760242200.0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,316 | INFO     | mean y: 2494220.7264957265
[2025-10-12 01:10:04] 2025-10-12 05:09:31,316 | INFO     | -- intersect: 40986453486.75383
[2025-10-12 01:10:04] 2025-10-12 05:09:31,316 | INFO     | intersect: 40986453486.75383
[2025-10-12 01:10:04] 2025-10-12 05:09:31,316 | INFO     | chi2: 0.8657508977337086
[2025-10-12 01:10:04] 2025-10-12 05:09:31,316 | INFO     | current chi2=0.8657508977337086 (change=60.7508378925699 %)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,317 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,317 | INFO     | sum of deviations: -8410754389.5
[2025-10-12 01:10:04] 2025-10-12 05:09:31,317 | INFO     | mean x: 1760242352.5
[2025-10-12 01:10:04] 2025-10-12 05:09:31,318 | INFO     | mean y: 2486226.776785714
[2025-10-12 01:10:04] 2025-10-12 05:09:31,318 | INFO     | -- intersect: 33989229279.60931
[2025-10-12 01:10:04] 2025-10-12 05:09:31,318 | INFO     | intersect: 33989229279.60931
[2025-10-12 01:10:04] 2025-10-12 05:09:31,318 | INFO     | chi2: 0.8391060332219793
[2025-10-12 01:10:04] 2025-10-12 05:09:31,318 | INFO     | current chi2=0.8391060332219793 (change=3.077659472427698 %)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,318 | INFO     | left removable region: 20
[2025-10-12 01:10:04] 2025-10-12 05:09:31,319 | INFO     | sum of square deviations: 233641590.0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,319 | INFO     | sum of deviations: 937609284.0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,319 | INFO     | mean x: 1760242322.0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,319 | INFO     | mean y: 2499350.0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,320 | INFO     | -- intersect: -7061395152.673593
[2025-10-12 01:10:04] 2025-10-12 05:09:31,320 | INFO     | intersect: -7061395152.673593
[2025-10-12 01:10:04] 2025-10-12 05:09:31,320 | INFO     | chi2: 0.0001427389255997865
[2025-10-12 01:10:04] 2025-10-12 05:09:31,320 | INFO     | -- intersect: -7061395152.673593
[2025-10-12 01:10:04] 2025-10-12 05:09:31,320 | INFO     | current memory leak: 4.01 B/s (using 91 data points, chi2=0.00)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,321 | INFO     | could have reported an average CPU frequency of 1943 MHz (8 samples)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,321 | INFO     | ..............................
[2025-10-12 01:10:04] 2025-10-12 05:09:31,321 | INFO     | . Timing measurements:
[2025-10-12 01:10:04] 2025-10-12 05:09:31,322 | INFO     | . get job = 0 s
[2025-10-12 01:10:04] 2025-10-12 05:09:31,322 | INFO     | . initial setup = 2 s
[2025-10-12 01:10:04] 2025-10-12 05:09:31,322 | INFO     | . payload setup = 8 s
[2025-10-12 01:10:04] 2025-10-12 05:09:31,322 | INFO     | . stage-in = 0 s
[2025-10-12 01:10:04] 2025-10-12 05:09:31,322 | INFO     | . payload execution = 7408 s
[2025-10-12 01:10:04] 2025-10-12 05:09:31,322 | INFO     | . stage-out = 0 s
[2025-10-12 01:10:04] 2025-10-12 05:09:31,322 | INFO     | . log creation = 0 s
[2025-10-12 01:10:04] 2025-10-12 05:09:31,323 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6839164309: 4095196 B (within 2537553920 B limit)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,323 | INFO     | ..............................
[2025-10-12 01:10:04] 2025-10-12 05:09:31,323 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6839164309/HITS.46676269._067898.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,323 | INFO     | total size of present files: 0 B (workdir size: 4095196 B)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,324 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6839164309/HITS.46676269._067898.pool.root.1 since it does not exist
[2025-10-12 01:10:04] 2025-10-12 05:09:31,419 | INFO     | 
[2025-10-12 01:10:04] 2025-10-12 05:09:31,419 | INFO     | job summary report
[2025-10-12 01:10:04] 2025-10-12 05:09:31,420 | INFO     | --------------------------------------------------
[2025-10-12 01:10:04] 2025-10-12 05:09:31,420 | INFO     | PanDA job id: 6839164309
[2025-10-12 01:10:04] 2025-10-12 05:09:31,421 | INFO     | task id: 46676269
[2025-10-12 01:10:04] 2025-10-12 05:09:31,421 | INFO     | errors: (none)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,421 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:10:04] 2025-10-12 05:09:31,421 | INFO     | pilot state: finished 
[2025-10-12 01:10:04] 2025-10-12 05:09:31,422 | INFO     | transexitcode: 0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,422 | INFO     | exeerrorcode: 0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,422 | INFO     | exeerrordiag: 
[2025-10-12 01:10:04] 2025-10-12 05:09:31,422 | INFO     | exitcode: 0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,423 | INFO     | exitmsg: OK
[2025-10-12 01:10:04] 2025-10-12 05:09:31,423 | INFO     | cpuconsumptiontime: 55512 s
[2025-10-12 01:10:04] 2025-10-12 05:09:31,423 | INFO     | nevents: 400
[2025-10-12 01:10:04] 2025-10-12 05:09:31,423 | INFO     | neventsw: 0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,424 | INFO     | pid: 23226
[2025-10-12 01:10:04] 2025-10-12 05:09:31,424 | INFO     | pgrp: 23226
[2025-10-12 01:10:04] 2025-10-12 05:09:31,424 | INFO     | corecount: 8
[2025-10-12 01:10:04] 2025-10-12 05:09:31,424 | INFO     | event service: False
[2025-10-12 01:10:04] 2025-10-12 05:09:31,425 | INFO     | sizes: {0: 2348857, 1: 2348857, 6: 2349147, 11: 2349175, 7420: 2376537, 7421: 2385535, 7423: 2385719, 7429: 2385941}
[2025-10-12 01:10:04] 2025-10-12 05:09:31,425 | INFO     | --------------------------------------------------
[2025-10-12 01:10:04] 2025-10-12 05:09:31,425 | INFO     | 
[2025-10-12 01:10:04] 2025-10-12 05:09:31,425 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 01:10:04] 2025-10-12 05:09:31,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,451 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,452 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,454 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,454 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,454 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,454 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,455 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,455 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,455 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,456 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,456 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,456 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,456 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:10:04] 2025-10-12 05:09:31,457 | INFO     | job 6839164309 has completed (purged errors)
[2025-10-12 01:10:04] 2025-10-12 05:09:31,457 | INFO     | overall cleanup function is called
[2025-10-12 01:10:04] 2025-10-12 05:09:31,540 | INFO     | number of running child processes to parent process 23226: 1
[2025-10-12 01:10:04] 2025-10-12 05:09:31,540 | INFO     | maximum number of monitored processes: 6
[2025-10-12 01:10:04] 2025-10-12 05:09:31,540 | INFO     | aborting job monitoring since job object (job id=6839164309) has expired
[2025-10-12 01:10:04] 2025-10-12 05:09:32,466 | INFO     | --- collectZombieJob: --- 10, [23226]
[2025-10-12 01:10:04] 2025-10-12 05:09:32,467 | INFO     | zombie collector waiting for pid 23226
[2025-10-12 01:10:04] 2025-10-12 05:09:32,467 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:10:04] 2025-10-12 05:09:32,467 | INFO     | collected zombie processes
[2025-10-12 01:10:04] 2025-10-12 05:09:32,467 | INFO     | will attempt to kill all subprocesses of pid=23226
[2025-10-12 01:10:04] 2025-10-12 05:09:32,556 | INFO     | process IDs to be killed: [23226] (in reverse order)
[2025-10-12 01:10:04] 2025-10-12 05:09:32,615 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:10:04] 2025-10-12 05:09:32,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:10:04] 2025-10-12 05:09:32,620 | INFO     | did not find any defunct processes belonging to 23226
[2025-10-12 01:10:04] 2025-10-12 05:09:32,623 | INFO     | did not find any defunct processes belonging to 23226
[2025-10-12 01:10:04] 2025-10-12 05:09:32,624 | INFO     | ready for new job
[2025-10-12 01:10:04] 2025-10-12 05:09:32,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:10:04] 2025-10-12 05:09:32,626 | INFO     | ***************************************
[2025-10-12 01:10:04] 2025-10-12 05:09:32,626 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:10:04] 2025-10-12 05:09:32,626 | INFO     | ***************************************
[2025-10-12 01:10:04] 2025-10-12 05:09:32,626 | INFO     | 
[2025-10-12 01:10:04] 2025-10-12 05:09:32,627 | INFO     | architecture information:
[2025-10-12 01:10:04] 2025-10-12 05:09:32,627 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:10:04] 2025-10-12 05:09:32,646 | INFO     | cat /etc/os-release:
[2025-10-12 01:10:04] NAME="CentOS Linux"
[2025-10-12 01:10:04] VERSION="7 (Core)"
[2025-10-12 01:10:04] ID="centos"
[2025-10-12 01:10:04] ID_LIKE="rhel fedora"
[2025-10-12 01:10:04] VERSION_ID="7"
[2025-10-12 01:10:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:10:04] ANSI_COLOR="0;31"
[2025-10-12 01:10:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:10:04] HOME_URL="https://www.centos.org/"
[2025-10-12 01:10:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:10:04] 
[2025-10-12 01:10:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:10:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:10:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:10:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:10:04] 
[2025-10-12 01:10:04] 2025-10-12 05:09:32,647 | INFO     | ***************************************
[2025-10-12 01:10:04] 2025-10-12 05:09:33,150 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 01:10:04] 2025-10-12 05:09:33,171 | INFO     | sufficient remaining disk space (18555600896 B)
[2025-10-12 01:10:04] 2025-10-12 05:09:33,171 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:10:04] 2025-10-12 05:09:33,172 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:10:04] 2025-10-12 05:09:33,172 | INFO     | update_server=False
[2025-10-12 01:10:04] 2025-10-12 05:09:33,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:10:04] 2025-10-12 05:09:33,172 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:10:04] 2025-10-12 05:09:33,173 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:10:04] 2025-10-12 05:09:33,173 | INFO     | aborting loop
[2025-10-12 01:10:04] 2025-10-12 05:09:33,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:10:04] 2025-10-12 05:09:33,497 | INFO     | all data control threads have been joined
[2025-10-12 01:10:04] 2025-10-12 05:09:34,178 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:34,179 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:34,180 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:34,183 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:34,231 | INFO     | all payload control threads have been joined
[2025-10-12 01:10:04] 2025-10-12 05:09:34,324 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:34,503 | INFO     | [data] control thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:34,688 | INFO     | all job control threads have been joined
[2025-10-12 01:10:04] 2025-10-12 05:09:34,791 | INFO     | [job] validate thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:34,907 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:35,178 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:35,237 | INFO     | [payload] control thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:35,277 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:35,287 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:35,471 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:35,694 | INFO     | [job] control thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:36,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:10:04] 2025-10-12 05:09:37,292 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:10:04] 2025-10-12 05:09:40,066 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:43,571 | INFO     | job.realtimelogging is not enabled
[2025-10-12 01:10:04] 2025-10-12 05:09:44,576 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:10:04] 2025-10-12 05:09:45,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140680145901376)>', '<ExcThread(monitor, started 140679430792960)>']
[2025-10-12 01:10:04] 2025-10-12 05:09:50,371 | INFO     | all workflow threads have been joined
[2025-10-12 01:10:04] 2025-10-12 05:09:50,371 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:10:04] 2025-10-12 05:09:50,376 | INFO     | traces error code: 0
[2025-10-12 01:10:04] 2025-10-12 05:09:50,377 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:10:04] 2025-10-12 05:10:04,302 | INFO     | PID=16780 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 01:10:04] 2025-10-12 05:10:04,302 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:10:04] 2025-10-12 05:10:04,303 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:10:04] 2025-10-12 05:10:04,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:10:04] 2025-10-12 05:10:04,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:10:04] 2025-10-12 05:10:04,303 | INFO     | [monitor] control thread has ended
[2025-10-12 01:10:04] 2025-10-12 05:10:04,419 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:10:04] 2025-10-12 05:10:04,423 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:10:04] 2025-10-12 05:10:04,428 [wrapper] pilotpid: 16780
[2025-10-12 01:10:04] 2025-10-12 05:10:04,432 [wrapper] Pilot exit status: 0
[2025-10-12 01:10:04] 2025-10-12 05:10:04,452 [wrapper] pandaids: 6839164309
[2025-10-12 01:10:04] 2025-10-12 05:10:04,498 [wrapper] cleanup supervisor_pilot 14689 16781
[2025-10-12 01:10:04] 2025-10-12 05:10:04,502 [wrapper] Test setup, not cleaning
[2025-10-12 01:10:04] 2025-10-12 05:10:04,507 [wrapper] apfmon messages muted
[2025-10-12 01:10:04] 2025-10-12 05:10:04,512 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:10:04] 2025-10-12 05:10:04,517 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:10:04]  *** Error codes and diagnostics ***
[2025-10-12 01:10:04]     "exeErrorCode": 0,
[2025-10-12 01:10:04]     "exeErrorDiag": "",
[2025-10-12 01:10:04]     "pilotErrorCode": 0,
[2025-10-12 01:10:04]     "pilotErrorDiag": "",
[2025-10-12 01:10:04]  *** Listing of results directory ***
[2025-10-12 01:10:04] total 408456
[2025-10-12 01:10:04] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 20:05 pilot3.tar.gz
[2025-10-12 01:10:04] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 20:38 queuedata.json
[2025-10-12 01:10:04] -rwx------ 1 boincer umatlas     36292 Oct 11 20:40 runpilot2-wrapper.sh
[2025-10-12 01:10:04] -rw-r--r-- 1 boincer umatlas       100 Oct 11 23:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:10:04] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 23:05 run_atlas
[2025-10-12 01:10:04] -rw-r--r-- 1 boincer umatlas       105 Oct 11 23:05 job.xml
[2025-10-12 01:10:04] -rw-r--r-- 2 boincer umatlas 219670659 Oct 11 23:05 EVNT.46676267._003103.pool.root.1
[2025-10-12 01:10:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:05 start_atlas.sh
[2025-10-12 01:10:04] drwxrwx--x 2 boincer umatlas      4096 Oct 11 23:05 shared
[2025-10-12 01:10:04] -rw-r--r-- 2 boincer umatlas    569681 Oct 11 23:05 input.tar.gz
[2025-10-12 01:10:04] -rw-r--r-- 1 boincer umatlas         0 Oct 11 23:05 boinc_lockfile
[2025-10-12 01:10:04] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 23:05 pandaJob.out
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas    975496 Oct 11 23:05 agis_schedconf.cvmfs.json
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas   1560580 Oct 11 23:05 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:10:04] drwx------ 5 boincer umatlas      4096 Oct 11 23:05 pilot3
[2025-10-12 01:10:04] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 01:02 init_data.xml
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas 191818047 Oct 12 01:08 HITS.46676269._067898.pool.root.1
[2025-10-12 01:10:04] -rw-r--r-- 1 boincer umatlas       529 Oct 12 01:09 boinc_task_state.xml
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas        95 Oct 12 01:09 pilot_heartbeat.json
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas      1052 Oct 12 01:09 memory_monitor_summary.json
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas    382058 Oct 12 01:09 log.46676269._067898.job.log.tgz.1
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas      7841 Oct 12 01:09 heartbeat.json
[2025-10-12 01:10:04] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 01:09 boinc_mmap_file
[2025-10-12 01:10:04] -rw-r--r-- 1 boincer umatlas        27 Oct 12 01:09 wrapper_checkpoint.txt
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas       745 Oct 12 01:10 pilotlog.txt
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas   1053343 Oct 12 01:10 log.46676269._067898.job.log.1
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas       357 Oct 12 01:10 output.list
[2025-10-12 01:10:04] -rw-r--r-- 1 boincer umatlas       620 Oct 12 01:10 runtime_log
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas   1454080 Oct 12 01:10 result.tar.gz
[2025-10-12 01:10:04] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 01:10 runtime_log.err
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas       659 Oct 12 01:10 OkNNDm9IzR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJ6hNDmRloB9n.diag
[2025-10-12 01:10:04] -rw-r--r-- 1 boincer umatlas     21305 Oct 12 01:10 stderr.txt
[2025-10-12 01:10:04] HITS file was successfully produced:
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas 191818047 Oct 12 01:08 shared/HITS.pool.root.1
[2025-10-12 01:10:04]  *** Contents of shared directory: ***
[2025-10-12 01:10:04] total 403848
[2025-10-12 01:10:04] -rw-r--r-- 2 boincer umatlas 219670659 Oct 11 23:05 ATLAS.root_0
[2025-10-12 01:10:04] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 23:05 start_atlas.sh
[2025-10-12 01:10:04] -rw-r--r-- 2 boincer umatlas    569681 Oct 11 23:05 input.tar.gz
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas 191818047 Oct 12 01:08 HITS.pool.root.1
[2025-10-12 01:10:04] -rw------- 1 boincer umatlas   1454080 Oct 12 01:10 result.tar.gz
01:10:06 (12585): run_atlas exited; CPU time 55466.452049
01:10:06 (12585): called boinc_finish(0)

</stderr_txt>
]]>

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