Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 22:25:22 (18888): vboxwrapper version 26210
2025-10-12 22:25:22 (18888): BOINC client version: 8.0.2
2025-10-12 22:25:22 (18888): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-12 22:25:22 (18888): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 22:25:23 (18888): Create VM. (boinc_c7140a58a9152a8e, slot#0)
2025-10-12 22:25:23 (18888): Setting Memory Size for VM. (6000MB)
2025-10-12 22:25:23 (18888): Setting CPU Count for VM. (3)
2025-10-12 22:25:24 (18888): Setting Chipset Options for VM.
2025-10-12 22:25:24 (18888): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 22:25:24 (18888): Setting Boot Options for VM.
2025-10-12 22:25:25 (18888): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 22:25:25 (18888): Enabling VM Network Access.
2025-10-12 22:25:25 (18888): Disabling USB Support for VM.
2025-10-12 22:25:25 (18888): Disabling COM Port Support for VM.
2025-10-12 22:25:26 (18888): Disabling LPT Port Support for VM.
2025-10-12 22:25:26 (18888): Disabling Audio Support for VM.
2025-10-12 22:25:26 (18888): Disabling Clipboard Support for VM.
2025-10-12 22:25:26 (18888): Disabling Drag and Drop Support for VM.
2025-10-12 22:25:27 (18888): Adding storage controller(s) to VM.
2025-10-12 22:25:27 (18888): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 22:25:27 (18888): Adding VirtualBox Guest Additions to VM.
2025-10-12 22:25:28 (18888): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 22:25:28 (18888): forwarding host port 61457 to guest port 80
2025-10-12 22:25:28 (18888): Enabling remote desktop for VM.
2025-10-12 22:25:29 (18888): Enabling shared directory for VM.
2025-10-12 22:25:29 (18888): Starting VM using VBoxManage interface. (boinc_c7140a58a9152a8e, slot#0)
2025-10-12 22:25:35 (18888): Successfully started VM. (PID = '3688')
2025-10-12 22:25:35 (18888): Reporting VM Process ID to BOINC.
2025-10-12 22:25:35 (18888): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-12 22:25:35 (18888): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 22:25:35 (18888): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 22:25:35 (18888): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 22:25:35 (18888): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 22:25:35 (18888): Detected: Web Application Enabled (http://localhost:61457)
2025-10-12 22:25:35 (18888): Detected: Remote Desktop Enabled (localhost:61458)
2025-10-12 22:25:35 (18888): Preference change detected
2025-10-12 22:25:35 (18888): Setting CPU throttle for VM. (100%)
2025-10-12 22:25:35 (18888): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 22:25:37 (18888): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 22:25:37 (18888): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 22:25:40 (18888): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 22:25:40 (18888): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 22:25:40 (18888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 22:26:45 (18888): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 22:26:45 (18888): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 22:26:52 (18888): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 22:26:52 (18888): Guest Log: 00:00:00.000126 main     Log opened 2025-10-12T22:26:50.770079000Z
2025-10-12 22:26:52 (18888): Guest Log: 00:00:00.000228 main     OS Product: Linux
2025-10-12 22:26:52 (18888): Guest Log: 00:00:00.000260 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 22:26:52 (18888): Guest Log: 00:00:00.000285 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 22:26:52 (18888): Guest Log: 00:00:00.000309 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 22:26:52 (18888): Guest Log: 00:00:00.000309 main     Process ID: 1348
2025-10-12 22:26:52 (18888): Guest Log: 00:00:00.000310 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 22:26:52 (18888): Guest Log: 00:00:00.001037 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 22:26:52 (18888): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 22:26:52 (18888): Guest Log: [INFO] Mounting shared directory
2025-10-12 22:26:52 (18888): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 22:26:55 (18888): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 22:26:55 (18888): Guest Log: [INFO] Detected branch: prod
2025-10-12 22:26:55 (18888): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 22:26:55 (18888): Guest Log: Copying input files
2025-10-12 22:26:56 (18888): Guest Log: Copied input files into RunAtlas.
2025-10-12 22:26:56 (18888): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-10-12 22:27:02 (18888): Guest Log: 00:00:10.002725 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 193 208 796 000ns (GuestNow=1 760 300 817 563 416 000 ns GuestLast=1 760 308 010 772 212 000 ns fSetTimeLastLoop=true )
2025-10-12 22:27:03 (18888): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 22:27:03 (18888): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 22:27:03 (18888): Guest Log: 2.6.3.0 1622 0 29604 151636 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-10-12 22:27:04 (18888): Guest Log: copied the webapp to /var/www
2025-10-12 22:27:04 (18888): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-12 22:27:04 (18888): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-12 22:27:04 (18888): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 22:27:04 (18888): Guest Log:  *** Starting ATLAS job. (PandaID=6839164266 taskID=46676269) ***
2025-10-13 00:05:38 (18888): Status Report: Elapsed Time: '6000.000000'
2025-10-13 00:05:38 (18888): Status Report: CPU Time: '16651.390625'
2025-10-13 01:45:41 (18888): Status Report: Elapsed Time: '12000.000000'
2025-10-13 01:45:41 (18888): Status Report: CPU Time: '34449.343750'
2025-10-13 03:25:44 (18888): Status Report: Elapsed Time: '18000.000000'
2025-10-13 03:25:44 (18888): Status Report: CPU Time: '52222.015625'
2025-10-13 04:19:26 (18888): Guest Log:  *** Job finished ***
2025-10-13 04:19:26 (18888): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:04,266 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:04,266 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:07,960 | INFO     | [monitor] cgroup control has ended
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:07,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464385972032)>', '<ExcThread(monitor, started 140463793227520)>']
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:08,291 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:08,291 | INFO     | [monitor] control thread has ended
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:12,986 | INFO     | all workflow threads have been joined
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:12,987 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:12,987 | INFO     | traces error code: 0
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:12,987 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:13,115 [wrapper] ==== pilot stdout END ====
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:13,120 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:13,125 [wrapper] pilotpid: 6015
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:13,130 [wrapper] Pilot exit status: 0
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:13,195 [wrapper] pandaids: 6839164266
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:13,230 [wrapper] cleanup supervisor_pilot 24224 6016
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:13,236 [wrapper] Test setup, not cleaning
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:13,242 [wrapper] apfmon messages muted
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:13,247 [wrapper] ==== wrapper stdout END ====
2025-10-13 04:19:26 (18888): Guest Log: 2025-10-13 02:19:13,251 [wrapper] ==== wrapper stderr END ====
2025-10-13 04:19:26 (18888): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 04:19:26 (18888): Guest Log:     "exeErrorCode": 0,
2025-10-13 04:19:26 (18888): Guest Log:     "exeErrorDiag": "",
2025-10-13 04:19:26 (18888): Guest Log:     "pilotErrorCode": 0,
2025-10-13 04:19:26 (18888): Guest Log:     "pilotErrorDiag": "",
2025-10-13 04:19:26 (18888): Guest Log:  *** Listing of results directory ***
2025-10-13 04:19:26 (18888): Guest Log: total 205848
2025-10-13 04:19:26 (18888): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 00:05 pilot3.tar.gz
2025-10-13 04:19:26 (18888): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 00:38 runpilot2-wrapper.sh
2025-10-13 04:19:26 (18888): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 00:38 queuedata.json
2025-10-13 04:19:26 (18888): Guest Log: -rwxr-xr-x. 1 atlas atlas      9023 Oct 12 20:26 init_data.xml
2025-10-13 04:19:26 (18888): Guest Log: -rwxr-xr-x. 1 atlas atlas    569677 Oct 12 20:26 input.tar.gz
2025-10-13 04:19:26 (18888): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 20:26 start_atlas.sh
2025-10-13 04:19:26 (18888): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 20:26 EVNT.46676267._003102.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 04:19:26 (18888): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 12 20:26 pandaJob.out
2025-10-13 04:19:26 (18888): Guest Log: -rw-------. 1 atlas atlas    975536 Oct 12 20:27 agis_schedconf.cvmfs.json
2025-10-13 04:19:26 (18888): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 20:27 pilot3
2025-10-13 04:19:26 (18888): Guest Log: -rw-------. 1 atlas atlas 200293917 Oct 13 02:17 HITS.46676269._067855.pool.root.1
2025-10-13 04:19:26 (18888): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 02:18 pilot_heartbeat.json
2025-10-13 04:19:26 (18888): Guest Log: -rw-------. 1 atlas atlas      1029 Oct 13 02:18 memory_monitor_summary.json
2025-10-13 04:19:26 (18888): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 02:18 agis_ddmendpoints.agis.ALL.json
2025-10-13 04:19:26 (18888): Guest Log: -rw-------. 1 atlas atlas    469246 Oct 13 02:18 log.46676269._067855.job.log.tgz.1
2025-10-13 04:19:26 (18888): Guest Log: -rw-------. 1 atlas atlas      7786 Oct 13 02:18 heartbeat.json
2025-10-13 04:19:26 (18888): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 13 02:19 pilotlog.txt
2025-10-13 04:19:26 (18888): Guest Log: -rw-------. 1 atlas atlas   2863019 Oct 13 02:19 log.46676269._067855.job.log.1
2025-10-13 04:19:26 (18888): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 02:19 output.list
2025-10-13 04:19:26 (18888): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 02:19 runtime_log
2025-10-13 04:19:26 (18888): Guest Log: -rw-------. 1 atlas atlas   3348480 Oct 13 02:19 result.tar.gz
2025-10-13 04:19:26 (18888): Guest Log: -rw-r--r--. 1 atlas atlas      8627 Oct 13 02:19 runtime_log.err
2025-10-13 04:19:26 (18888): Guest Log: -rw-------. 1 atlas atlas       657 Oct 13 02:19 mA0MDmfHzR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmtsSMDmAMuT7m.diag
2025-10-13 04:19:26 (18888): Guest Log: Looking for outputfile HITS.46676269._067855.pool.root.1
2025-10-13 04:19:26 (18888): Guest Log: HITS file was successfully produced
2025-10-13 04:19:26 (18888): Guest Log: -rw-------. 1 atlas atlas 200293917 Oct 13 02:17 /home/atlas/RunAtlas/HITS.46676269._067855.pool.root.1
2025-10-13 04:19:27 (18888): Guest Log: Successfully finished the ATLAS job!
2025-10-13 04:19:27 (18888): Guest Log: Copying the results back to the shared directory!
2025-10-13 04:19:27 (18888): Guest Log:  *** Contents of shared directory: ***
2025-10-13 04:19:27 (18888): Guest Log: total 413284
2025-10-13 04:19:27 (18888): Guest Log: -rwxrwxrwx. 1 root root 218952513 Oct 12 20:25 ATLAS.root_0
2025-10-13 04:19:27 (18888): Guest Log: -rwxrwxrwx. 1 root root 200293917 Oct 13  2025 HITS.pool.root.1
2025-10-13 04:19:27 (18888): Guest Log: -rwxrwxrwx. 1 root root      9023 Oct 12 20:25 init_data.xml
2025-10-13 04:19:27 (18888): Guest Log: -rwxrwxrwx. 1 root root    569677 Oct 12 03:03 input.tar.gz
2025-10-13 04:19:27 (18888): Guest Log: -rwxrwxrwx. 1 root root   3348480 Oct 13  2025 result.tar.gz
2025-10-13 04:19:27 (18888): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 03:03 start_atlas.sh
2025-10-13 04:19:27 (18888): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 04:19:27 (18888): VM Completion File Detected.
2025-10-13 04:19:27 (18888): Powering off VM.
2025-10-13 04:19:27 (18888): Successfully stopped VM.
2025-10-13 04:19:27 (18888): Deregistering VM. (boinc_c7140a58a9152a8e, slot#0)
2025-10-13 04:19:27 (18888): Removing network bandwidth throttle group from VM.
2025-10-13 04:19:28 (18888): Removing VM from VirtualBox.
2025-10-13 04:19:33 (18888): called boinc_finish(0)

</stderr_txt>
]]>

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