Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:40:37 (2743319): wrapper (7.7.26015): starting
14:40:37 (2743319): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 14:40:37] Arguments: --nthreads 3
[2025-10-12 14:40:37] Threads: 3
[2025-10-12 14:40:37] Checking for CVMFS
[2025-10-12 14:40:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:40:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:40:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:40:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:40:37] 2.9.2.0 1455317 4398 66880 151620 0 57 30095422 36864001 0 130560 0 3381134 99.991 146735 932 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 14:40:37] CVMFS is ok
[2025-10-12 14:40:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:40:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:40:37] Further information can be found at the LHC@home message board.
[2025-10-12 14:40:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:40:37] Checking for apptainer binary...
[2025-10-12 14:40:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:40:37] Running /usr/bin/apptainer --version
[2025-10-12 14:40:37] apptainer version 1.4.1-1.1
[2025-10-12 14:40:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:40:37] magicA252a
[2025-10-12 14:40:37] apptainer works
[2025-10-12 14:40:37] Set ATHENA_PROC_NUMBER=3
[2025-10-12 14:40:37] Set ATHENA_CORE_NUMBER=3
[2025-10-12 14:40:37] Starting ATLAS job with PandaID=6838773076
[2025-10-12 14:40:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:09:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:09:04] 2025-10-12 14:08:09,332 | INFO     | aborting loop
[2025-10-12 16:09:04] 2025-10-12 14:08:09,729 | INFO     | all job control threads have been joined
[2025-10-12 16:09:04] 2025-10-12 14:08:09,770 | INFO     | all payload control threads have been joined
[2025-10-12 16:09:04] 2025-10-12 14:08:10,247 | INFO     | all data control threads have been joined
[2025-10-12 16:09:04] 2025-10-12 14:08:10,338 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:10,339 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:10,339 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:10,504 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:10,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:09:04] 2025-10-12 14:08:10,733 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:09:04] 2025-10-12 14:08:10,734 | INFO     | [job] control thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:10,740 | INFO     | [job] validate thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:10,776 | INFO     | [payload] control thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:10,809 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:11,031 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:11,253 | INFO     | [data] control thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:11,370 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:11,406 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:11,537 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:11,577 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:12,721 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:14,741 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:09:04] 2025-10-12 14:08:39,209 | INFO     | PID=2747053 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:09:04] 2025-10-12 14:08:39,209 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:09:04] 2025-10-12 14:08:39,209 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:09:04] 2025-10-12 14:08:39,209 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:09:04] 2025-10-12 14:08:57,210 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:09:04] 2025-10-12 14:08:59,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273234868032)>', '<ExcThread(monitor, started 140272583288576)>']
[2025-10-12 16:09:04] 2025-10-12 14:08:59,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:09:04] 2025-10-12 14:08:59,313 | INFO     | [monitor] control thread has ended
[2025-10-12 16:09:04] 2025-10-12 14:09:04,270 | INFO     | all workflow threads have been joined
[2025-10-12 16:09:04] 2025-10-12 14:09:04,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:09:04] 2025-10-12 14:09:04,271 | INFO     | traces error code: 0
[2025-10-12 16:09:04] 2025-10-12 14:09:04,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:09:04] 2025-10-12 14:09:04,318 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:09:04] 2025-10-12 14:09:04,321 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:09:04] 2025-10-12 14:09:04,324 [wrapper] pilotpid: 2747053
[2025-10-12 16:09:04] 2025-10-12 14:09:04,327 [wrapper] Pilot exit status: 0
[2025-10-12 16:09:04] 2025-10-12 14:09:04,334 [wrapper] pandaids: 6838773076
[2025-10-12 16:09:04] 2025-10-12 14:09:04,352 [wrapper] cleanup supervisor_pilot 2765660 2747054
[2025-10-12 16:09:04] 2025-10-12 14:09:04,355 [wrapper] Test setup, not cleaning
[2025-10-12 16:09:04] 2025-10-12 14:09:04,358 [wrapper] apfmon messages muted
[2025-10-12 16:09:04] 2025-10-12 14:09:04,360 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:09:04] 2025-10-12 14:09:04,363 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:09:04]  *** Error codes and diagnostics ***
[2025-10-12 16:09:04]     "exeErrorCode": 0,
[2025-10-12 16:09:04]     "exeErrorDiag": "",
[2025-10-12 16:09:04]     "pilotErrorCode": 0,
[2025-10-12 16:09:04]     "pilotErrorDiag": "",
[2025-10-12 16:09:04]  *** Listing of results directory ***
[2025-10-12 16:09:04] total 402960
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc    557409 Oct 11 20:14 pilot3.tar.gz
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc      5112 Oct 11 20:19 queuedata.json
[2025-10-12 16:09:04] -rwx------ 1 boinc boinc     36292 Oct 11 20:20 runpilot2-wrapper.sh
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc       100 Oct 12 14:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:09:04] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 14:40 run_atlas
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc       105 Oct 12 14:40 job.xml
[2025-10-12 16:09:04] -rw-r--r-- 2 boinc boinc 222040219 Oct 12 14:40 EVNT.46676267._002511.pool.root.1
[2025-10-12 16:09:04] -rw-r--r-- 2 boinc boinc    569681 Oct 12 14:40 input.tar.gz
[2025-10-12 16:09:04] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:40 start_atlas.sh
[2025-10-12 16:09:04] drwxrwx--x 2 boinc boinc      4096 Oct 12 14:40 shared
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:40 boinc_setup_complete
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc      6200 Oct 12 14:40 init_data.xml
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:40 boinc_lockfile
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc      2550 Oct 12 14:40 pandaJob.out
[2025-10-12 16:09:04] -rw------- 1 boinc boinc    975512 Oct 12 14:40 agis_schedconf.cvmfs.json
[2025-10-12 16:09:04] -rw------- 1 boinc boinc   1560580 Oct 12 14:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:09:04] drwx------ 5 boinc boinc      4096 Oct 12 14:40 pilot3
[2025-10-12 16:09:04] -rw------- 1 boinc boinc 184665256 Oct 12 16:07 HITS.46676269._062506.pool.root.1
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc       530 Oct 12 16:07 boinc_task_state.xml
[2025-10-12 16:09:04] -rw------- 1 boinc boinc      1021 Oct 12 16:07 memory_monitor_summary.json
[2025-10-12 16:09:04] -rw------- 1 boinc boinc    250428 Oct 12 16:08 log.46676269._062506.job.log.tgz.1
[2025-10-12 16:09:04] -rw------- 1 boinc boinc      7771 Oct 12 16:08 heartbeat.json
[2025-10-12 16:09:04] -rw------- 1 boinc boinc        95 Oct 12 16:08 pilot_heartbeat.json
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc      8192 Oct 12 16:08 boinc_mmap_file
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc        27 Oct 12 16:08 wrapper_checkpoint.txt
[2025-10-12 16:09:04] -rw------- 1 boinc boinc      4752 Oct 12 16:09 pilotlog.txt
[2025-10-12 16:09:04] -rw------- 1 boinc boinc    765553 Oct 12 16:09 log.46676269._062506.job.log.1
[2025-10-12 16:09:04] -rw------- 1 boinc boinc       357 Oct 12 16:09 output.list
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc       620 Oct 12 16:09 runtime_log
[2025-10-12 16:09:04] -rw------- 1 boinc boinc   1034240 Oct 12 16:09 result.tar.gz
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc      8797 Oct 12 16:09 runtime_log.err
[2025-10-12 16:09:04] -rw------- 1 boinc boinc       662 Oct 12 16:09 3xuMDmBOtR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1ChNDmoIkwlm.diag
[2025-10-12 16:09:04] -rw-r--r-- 1 boinc boinc      6942 Oct 12 16:09 stderr.txt
[2025-10-12 16:09:04] HITS file was successfully produced:
[2025-10-12 16:09:04] -rw------- 1 boinc boinc 184665256 Oct 12 16:07 shared/HITS.pool.root.1
[2025-10-12 16:09:04]  *** Contents of shared directory: ***
[2025-10-12 16:09:04] total 398776
[2025-10-12 16:09:04] -rw-r--r-- 2 boinc boinc 222040219 Oct 12 14:40 ATLAS.root_0
[2025-10-12 16:09:04] -rw-r--r-- 2 boinc boinc    569681 Oct 12 14:40 input.tar.gz
[2025-10-12 16:09:04] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:40 start_atlas.sh
[2025-10-12 16:09:04] -rw------- 1 boinc boinc 184665256 Oct 12 16:07 HITS.pool.root.1
[2025-10-12 16:09:04] -rw------- 1 boinc boinc   1034240 Oct 12 16:09 result.tar.gz
16:09:05 (2743319): run_atlas exited; CPU time 15042.723933
16:09:05 (2743319): called boinc_finish(0)

</stderr_txt>
]]>

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