Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:52:56 (9374): wrapper (7.7.26015): starting
22:52:56 (9374): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 22:52:56] Arguments: --nthreads 12
[2025-10-11 22:52:56] Threads: 12
[2025-10-11 22:52:56] Checking for CVMFS
[2025-10-11 22:52:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:52:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:52:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:52:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:52:56] 2.11.2.0 3165 7927 87364 151604 3 59 11048418 20275201 1 130560 0 7510660 99.993 260028 42529 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 22:52:56] CVMFS is ok
[2025-10-11 22:52:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:52:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:52:56] Further information can be found at the LHC@home message board.
[2025-10-11 22:52:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:52:56] Checking for apptainer binary...
[2025-10-11 22:52:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:52:56] Running /usr/bin/apptainer --version
[2025-10-11 22:52:56] apptainer version 1.3.2-1.el7
[2025-10-11 22:52:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:52:58] c-115-40.aglt2.org
[2025-10-11 22:52:58] apptainer works
[2025-10-11 22:52:58] Set ATHENA_PROC_NUMBER=12
[2025-10-11 22:52:58] Set ATHENA_CORE_NUMBER=12
[2025-10-11 22:52:58] Starting ATLAS job with PandaID=6838631773
[2025-10-11 22:52:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:59:25]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:59:25]  replicas=None
[2025-10-11 23:59:25]  scope=mc23_13p6TeV
[2025-10-11 23:59:25]  status=None
[2025-10-11 23:59:25]  status_code=0
[2025-10-11 23:59:25]  storage_token=
[2025-10-11 23:59:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838631773/log.46676269._060578.job.log.tgz.1
[2025-10-11 23:59:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/b8/log.46676269._060578.job.log.tgz.1
[2025-10-11 23:59:25]  workdir=None
[2025-10-11 23:59:25] ]
[2025-10-11 23:59:25] 2025-10-12 03:58:35,194 | INFO     | transferring file log.46676269._060578.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838631773/log.46676269._060578.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 23:59:25] 2025-10-12 03:58:35,194 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838631773/log.46676269._060578.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._060578.job
[2025-10-11 23:59:25] 2025-10-12 03:58:35,217 | INFO     | adding to output.list: log.46676269._060578.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/29/b8/log.46676269._060578.job.log.tg
[2025-10-11 23:59:25] 2025-10-12 03:58:35,217 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 23:59:25] 2025-10-12 03:58:35,218 | INFO     | summary of transferred files:
[2025-10-11 23:59:25] 2025-10-12 03:58:35,218 | INFO     |  -- lfn=log.46676269._060578.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 23:59:25] 2025-10-12 03:58:35,218 | INFO     | stage-out finished correctly
[2025-10-11 23:59:25] 2025-10-12 03:58:35,850 | INFO     | PID=13116 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 23:59:25] 2025-10-12 03:58:36,851 | INFO     | time since job start (3924s) is within the limit (172800.0s)
[2025-10-11 23:59:25] 2025-10-12 03:58:38,212 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 23:59:25] 2025-10-12 03:58:38,289 | INFO     | job 6838631773 has state=finished
[2025-10-11 23:59:25] 2025-10-12 03:58:38,290 | INFO     | preparing for final server update for job 6838631773 in state='finished'
[2025-10-11 23:59:25] 2025-10-12 03:58:38,290 | INFO     | this job has now completed (state=finished)
[2025-10-11 23:59:25] 2025-10-12 03:58:38,291 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 23:59:25] 2025-10-12 03:58:38,291 | INFO     | log transfer has been attempted: DONE
[2025-10-11 23:59:25] 2025-10-12 03:58:38,291 | INFO     | job 6838631773 has finished - writing final server update
[2025-10-11 23:59:25] 2025-10-12 03:58:38,291 | INFO     | total number of processed events: 400 (read)
[2025-10-11 23:59:25] 2025-10-12 03:58:38,292 | INFO     | executing command: lscpu
[2025-10-11 23:59:25] 2025-10-12 03:58:38,318 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 23:59:25] 2025-10-12 03:58:38,741 | WARNING  | process 19537 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 23:59:25] 2025-10-12 03:58:38,741 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838631773/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:59:25] 2025-10-12 03:58:38,826 | INFO     | number of running child processes to parent process 19537: 1
[2025-10-11 23:59:25] 2025-10-12 03:58:38,826 | INFO     | maximum number of monitored processes: 6
[2025-10-11 23:59:25] 2025-10-12 03:58:38,857 | INFO     | time since job start (3926s) is within the limit (172800.0s)
[2025-10-11 23:59:25] 2025-10-12 03:58:40,859 | INFO     | time since job start (3928s) is within the limit (172800.0s)
[2025-10-11 23:59:25] 2025-10-12 03:58:41,329 | INFO     | monitor loop #294: job 0:6838631773 is in state 'finished'
[2025-10-11 23:59:25] 2025-10-12 03:58:41,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:59:25] 2025-10-12 03:58:42,817 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 23:59:25] 2025-10-12 03:58:42,820 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-10-11 23:59:25] 2025-10-12 03:58:42,822 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838631773/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:59:25] 2025-10-12 03:58:42,823 | INFO     | extracted standard info from prmon json
[2025-10-11 23:59:25] 2025-10-12 03:58:42,823 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:59:25] 2025-10-12 03:58:42,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:59:25] 2025-10-12 03:58:42,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:59:25] 2025-10-12 03:58:42,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:59:25] 2025-10-12 03:58:42,825 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:59:25] 2025-10-12 03:58:42,825 | INFO     | sum of square deviations: 57407588.0
[2025-10-11 23:59:25] 2025-10-12 03:58:42,825 | INFO     | sum of deviations: -4879715252.0
[2025-10-11 23:59:25] 2025-10-12 03:58:42,825 | INFO     | mean x: 1760239634.0
[2025-10-11 23:59:25] 2025-10-12 03:58:42,826 | INFO     | mean y: 2793723.807017544
[2025-10-11 23:59:25] 2025-10-12 03:58:42,826 | INFO     | -- intersect: 149625317303.87274
[2025-10-11 23:59:25] 2025-10-12 03:58:42,826 | INFO     | intersect: 149625317303.87274
[2025-10-11 23:59:25] 2025-10-12 03:58:42,826 | INFO     | chi2: 0.07382362641213076
[2025-10-11 23:59:25] 2025-10-12 03:58:42,826 | INFO     | -- intersect: 149625317303.87274
[2025-10-11 23:59:25] 2025-10-12 03:58:42,826 | INFO     | current memory leak: -85.00 B/s (using 57 data points, chi2=0.07)
[2025-10-11 23:59:25] 2025-10-12 03:58:42,826 | INFO     | could have reported an average CPU frequency of 2152 MHz (6 samples)
[2025-10-11 23:59:25] 2025-10-12 03:58:42,827 | INFO     | ..............................
[2025-10-11 23:59:25] 2025-10-12 03:58:42,827 | INFO     | . Timing measurements:
[2025-10-11 23:59:25] 2025-10-12 03:58:42,827 | INFO     | . get job = 0 s
[2025-10-11 23:59:25] 2025-10-12 03:58:42,827 | INFO     | . initial setup = 2 s
[2025-10-11 23:59:25] 2025-10-12 03:58:42,828 | INFO     | . payload setup = 6 s
[2025-10-11 23:59:25] 2025-10-12 03:58:42,828 | INFO     | . stage-in = 0 s
[2025-10-11 23:59:25] 2025-10-12 03:58:42,828 | INFO     | . payload execution = 3895 s
[2025-10-11 23:59:25] 2025-10-12 03:58:42,828 | INFO     | . stage-out = 0 s
[2025-10-11 23:59:25] 2025-10-12 03:58:42,828 | INFO     | . log creation = 0 s
[2025-10-11 23:59:25] 2025-10-12 03:58:42,828 | INFO     | ..............................
[2025-10-11 23:59:25] 2025-10-12 03:58:42,870 | INFO     | time since job start (3930s) is within the limit (172800.0s)
[2025-10-11 23:59:25] 2025-10-12 03:58:42,906 | INFO     | 
[2025-10-11 23:59:25] 2025-10-12 03:58:42,906 | INFO     | job summary report
[2025-10-11 23:59:25] 2025-10-12 03:58:42,906 | INFO     | --------------------------------------------------
[2025-10-11 23:59:25] 2025-10-12 03:58:42,906 | INFO     | PanDA job id: 6838631773
[2025-10-11 23:59:25] 2025-10-12 03:58:42,907 | INFO     | task id: 46676269
[2025-10-11 23:59:25] 2025-10-12 03:58:42,907 | INFO     | errors: (none)
[2025-10-11 23:59:25] 2025-10-12 03:58:42,907 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:59:25] 2025-10-12 03:58:42,907 | INFO     | pilot state: finished 
[2025-10-11 23:59:25] 2025-10-12 03:58:42,907 | INFO     | transexitcode: 0
[2025-10-11 23:59:25] 2025-10-12 03:58:42,907 | INFO     | exeerrorcode: 0
[2025-10-11 23:59:25] 2025-10-12 03:58:42,908 | INFO     | exeerrordiag: 
[2025-10-11 23:59:25] 2025-10-12 03:58:42,908 | INFO     | exitcode: 0
[2025-10-11 23:59:25] 2025-10-12 03:58:42,908 | INFO     | exitmsg: OK
[2025-10-11 23:59:25] 2025-10-12 03:58:42,908 | INFO     | cpuconsumptiontime: 41521 s
[2025-10-11 23:59:25] 2025-10-12 03:58:42,908 | INFO     | nevents: 400
[2025-10-11 23:59:25] 2025-10-12 03:58:42,908 | INFO     | neventsw: 0
[2025-10-11 23:59:25] 2025-10-12 03:58:42,909 | INFO     | pid: 19537
[2025-10-11 23:59:25] 2025-10-12 03:58:42,909 | INFO     | pgrp: 19537
[2025-10-11 23:59:25] 2025-10-12 03:58:42,909 | INFO     | corecount: 12
[2025-10-11 23:59:25] 2025-10-12 03:58:42,909 | INFO     | event service: False
[2025-10-11 23:59:25] 2025-10-12 03:58:42,909 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 3906: 2374988, 3907: 2383986, 3910: 2384170, 3914: 2384364}
[2025-10-11 23:59:25] 2025-10-12 03:58:42,909 | INFO     | --------------------------------------------------
[2025-10-11 23:59:25] 2025-10-12 03:58:42,909 | INFO     | 
[2025-10-11 23:59:25] 2025-10-12 03:58:42,910 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 23:59:25] 2025-10-12 03:58:42,934 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,935 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,935 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,935 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,936 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,936 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:59:25] 2025-10-12 03:58:42,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:59:25] 2025-10-12 03:58:42,938 | INFO     | job 6838631773 has completed (purged errors)
[2025-10-11 23:59:25] 2025-10-12 03:58:42,938 | INFO     | overall cleanup function is called
[2025-10-11 23:59:25] 2025-10-12 03:58:43,945 | INFO     | --- collectZombieJob: --- 10, [19537]
[2025-10-11 23:59:25] 2025-10-12 03:58:43,945 | INFO     | zombie collector waiting for pid 19537
[2025-10-11 23:59:25] 2025-10-12 03:58:43,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:59:25] 2025-10-12 03:58:43,946 | INFO     | collected zombie processes
[2025-10-11 23:59:25] 2025-10-12 03:58:43,946 | INFO     | will attempt to kill all subprocesses of pid=19537
[2025-10-11 23:59:25] 2025-10-12 03:58:44,034 | INFO     | process IDs to be killed: [19537] (in reverse order)
[2025-10-11 23:59:25] 2025-10-12 03:58:44,085 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:59:25] 2025-10-12 03:58:44,086 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:59:25] 2025-10-12 03:58:44,089 | INFO     | did not find any defunct processes belonging to 19537
[2025-10-11 23:59:25] 2025-10-12 03:58:44,093 | INFO     | did not find any defunct processes belonging to 19537
[2025-10-11 23:59:25] 2025-10-12 03:58:44,093 | INFO     | ready for new job
[2025-10-11 23:59:25] 2025-10-12 03:58:44,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:59:25] 2025-10-12 03:58:44,094 | INFO     | ***************************************
[2025-10-11 23:59:25] 2025-10-12 03:58:44,094 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:59:25] 2025-10-12 03:58:44,094 | INFO     | ***************************************
[2025-10-11 23:59:25] 2025-10-12 03:58:44,095 | INFO     | 
[2025-10-11 23:59:25] 2025-10-12 03:58:44,095 | INFO     | architecture information:
[2025-10-11 23:59:25] 2025-10-12 03:58:44,096 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:59:25] 2025-10-12 03:58:44,111 | INFO     | cat /etc/os-release:
[2025-10-11 23:59:25] NAME="CentOS Linux"
[2025-10-11 23:59:25] VERSION="7 (Core)"
[2025-10-11 23:59:25] ID="centos"
[2025-10-11 23:59:25] ID_LIKE="rhel fedora"
[2025-10-11 23:59:25] VERSION_ID="7"
[2025-10-11 23:59:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:59:25] ANSI_COLOR="0;31"
[2025-10-11 23:59:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:59:25] HOME_URL="https://www.centos.org/"
[2025-10-11 23:59:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:59:25] 
[2025-10-11 23:59:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:59:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:59:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:59:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:59:25] 
[2025-10-11 23:59:25] 2025-10-12 03:58:44,111 | INFO     | ***************************************
[2025-10-11 23:59:25] 2025-10-12 03:58:44,614 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 23:59:25] 2025-10-12 03:58:44,638 | INFO     | sufficient remaining disk space (18709741568 B)
[2025-10-11 23:59:25] 2025-10-12 03:58:44,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:59:25] 2025-10-12 03:58:44,639 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:59:25] 2025-10-12 03:58:44,639 | INFO     | update_server=False
[2025-10-11 23:59:25] 2025-10-12 03:58:44,639 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:59:25] 2025-10-12 03:58:44,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:59:25] 2025-10-12 03:58:44,640 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 23:59:25] 2025-10-12 03:58:44,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:59:25] 2025-10-12 03:58:44,640 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:59:25] 2025-10-12 03:58:44,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:59:25] 2025-10-12 03:58:44,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:59:25] 2025-10-12 03:58:44,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:59:25] 2025-10-12 03:58:44,836 | INFO     | aborting loop
[2025-10-11 23:59:25] 2025-10-12 03:58:45,391 | INFO     | all data control threads have been joined
[2025-10-11 23:59:25] 2025-10-12 03:58:45,537 | INFO     | all job control threads have been joined
[2025-10-11 23:59:25] 2025-10-12 03:58:45,644 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:45,645 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:45,807 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:59:25] 2025-10-12 03:58:45,841 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:45,903 | INFO     | all payload control threads have been joined
[2025-10-11 23:59:25] 2025-10-12 03:58:45,923 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:46,068 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:46,150 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:46,397 | INFO     | [data] control thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:46,478 | INFO     | [job] validate thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:46,542 | INFO     | [job] control thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:46,608 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:46,731 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:46,896 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:46,908 | INFO     | [payload] control thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:46,915 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:47,813 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:58:48,646 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:59:25] 2025-10-12 03:59:18,555 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:59:25] 2025-10-12 03:59:19,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140159328712512)>', '<ExcThread(monitor, started 140158540183296)>']
[2025-10-11 23:59:25] 2025-10-12 03:59:19,779 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:59:25] 2025-10-12 03:59:19,779 | INFO     | [monitor] control thread has ended
[2025-10-11 23:59:25] 2025-10-12 03:59:24,774 | INFO     | all workflow threads have been joined
[2025-10-11 23:59:25] 2025-10-12 03:59:24,776 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:59:25] 2025-10-12 03:59:24,777 | INFO     | traces error code: 0
[2025-10-11 23:59:25] 2025-10-12 03:59:24,778 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:59:25] 2025-10-12 03:59:24,873 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:59:25] 2025-10-12 03:59:24,876 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:59:25] 2025-10-12 03:59:24,880 [wrapper] pilotpid: 13116
[2025-10-11 23:59:25] 2025-10-12 03:59:24,883 [wrapper] Pilot exit status: 0
[2025-10-11 23:59:25] 2025-10-12 03:59:24,899 [wrapper] pandaids: 6838631773
[2025-10-11 23:59:25] 2025-10-12 03:59:24,938 [wrapper] cleanup supervisor_pilot 15431 13117
[2025-10-11 23:59:25] 2025-10-12 03:59:24,942 [wrapper] Test setup, not cleaning
[2025-10-11 23:59:25] 2025-10-12 03:59:24,946 [wrapper] apfmon messages muted
[2025-10-11 23:59:25] 2025-10-12 03:59:24,950 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:59:25] 2025-10-12 03:59:24,954 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:59:25]  *** Error codes and diagnostics ***
[2025-10-11 23:59:25]     "exeErrorCode": 0,
[2025-10-11 23:59:25]     "exeErrorDiag": "",
[2025-10-11 23:59:25]     "pilotErrorCode": 0,
[2025-10-11 23:59:25]     "pilotErrorDiag": "",
[2025-10-11 23:59:25]  *** Listing of results directory ***
[2025-10-11 23:59:25] total 406084
[2025-10-11 23:59:25] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 11:50 pilot3.tar.gz
[2025-10-11 23:59:25] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 12:07 queuedata.json
[2025-10-11 23:59:25] -rwx------ 1 boincer umatlas     36292 Oct 11 12:07 runpilot2-wrapper.sh
[2025-10-11 23:59:25] -rw-r--r-- 1 boincer umatlas       100 Oct 11 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:59:25] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 22:52 run_atlas
[2025-10-11 23:59:25] -rw-r--r-- 1 boincer umatlas       105 Oct 11 22:52 job.xml
[2025-10-11 23:59:25] -rw-r--r-- 2 boincer umatlas 221624576 Oct 11 22:52 EVNT.46676267._002432.pool.root.1
[2025-10-11 23:59:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 22:52 start_atlas.sh
[2025-10-11 23:59:25] drwxrwx--x 2 boincer umatlas      4096 Oct 11 22:52 shared
[2025-10-11 23:59:25] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 22:52 input.tar.gz
[2025-10-11 23:59:25] -rw-r--r-- 1 boincer umatlas         0 Oct 11 22:52 boinc_lockfile
[2025-10-11 23:59:25] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 22:52 pandaJob.out
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas    975496 Oct 11 22:53 agis_schedconf.cvmfs.json
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas   1560580 Oct 11 22:53 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:59:25] drwx------ 5 boincer umatlas      4096 Oct 11 22:53 pilot3
[2025-10-11 23:59:25] -rw-r--r-- 1 boincer umatlas      5952 Oct 11 23:54 init_data.xml
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas        95 Oct 11 23:58 pilot_heartbeat.json
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas 188408926 Oct 11 23:58 HITS.46676269._060578.pool.root.1
[2025-10-11 23:59:25] -rw-r--r-- 1 boincer umatlas       530 Oct 11 23:58 boinc_task_state.xml
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas      1049 Oct 11 23:58 memory_monitor_summary.json
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas    368866 Oct 11 23:58 log.46676269._060578.job.log.tgz.1
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas      7855 Oct 11 23:58 heartbeat.json
[2025-10-11 23:59:25] -rw-r--r-- 1 boincer umatlas        27 Oct 11 23:59 wrapper_checkpoint.txt
[2025-10-11 23:59:25] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 23:59 boinc_mmap_file
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas      4552 Oct 11 23:59 pilotlog.txt
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas    578137 Oct 11 23:59 log.46676269._060578.job.log.1
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas       357 Oct 11 23:59 output.list
[2025-10-11 23:59:25] -rw-r--r-- 1 boincer umatlas       620 Oct 11 23:59 runtime_log
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas    962560 Oct 11 23:59 result.tar.gz
[2025-10-11 23:59:25] -rw-r--r-- 1 boincer umatlas      8705 Oct 11 23:59 runtime_log.err
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas       659 Oct 11 23:59 bMOKDmpIrR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmsCSMDm7pSIUo.diag
[2025-10-11 23:59:25] -rw-r--r-- 1 boincer umatlas     21873 Oct 11 23:59 stderr.txt
[2025-10-11 23:59:25] HITS file was successfully produced:
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas 188408926 Oct 11 23:58 shared/HITS.pool.root.1
[2025-10-11 23:59:25]  *** Contents of shared directory: ***
[2025-10-11 23:59:25] total 401948
[2025-10-11 23:59:25] -rw-r--r-- 2 boincer umatlas 221624576 Oct 11 22:52 ATLAS.root_0
[2025-10-11 23:59:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 22:52 start_atlas.sh
[2025-10-11 23:59:25] -rw-r--r-- 2 boincer umatlas    569680 Oct 11 22:52 input.tar.gz
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas 188408926 Oct 11 23:58 HITS.pool.root.1
[2025-10-11 23:59:25] -rw------- 1 boincer umatlas    962560 Oct 11 23:59 result.tar.gz
23:59:26 (9374): run_atlas exited; CPU time 41517.528623
23:59:26 (9374): called boinc_finish(0)

</stderr_txt>
]]>

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