Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:47:12 (3065446): wrapper (7.7.26015): starting
23:47:12 (3065446): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 23:47:12] Arguments: --nthreads 8
[2025-10-11 23:47:12] Threads: 8
[2025-10-11 23:47:12] Checking for CVMFS
[2025-10-11 23:47:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:47:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:47:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:47:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:47:14] 2.13.2.0 3657063 128722 461976 151606 1 333 27468718 32935937 24641 16776704 0 184541275 99.580 214691257 30648 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 23:47:14] CVMFS is ok
[2025-10-11 23:47:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:47:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:47:14] Further information can be found at the LHC@home message board.
[2025-10-11 23:47:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:47:14] Checking for apptainer binary...
[2025-10-11 23:47:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:47:14] Running /usr/bin/apptainer --version
[2025-10-11 23:47:14] apptainer version 1.4.3-1.el9
[2025-10-11 23:47:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:47:15] c6-6-39-4.aglt2.org
[2025-10-11 23:47:15] apptainer works
[2025-10-11 23:47:15] Set ATHENA_PROC_NUMBER=8
[2025-10-11 23:47:15] Set ATHENA_CORE_NUMBER=8
[2025-10-11 23:47:15] Starting ATLAS job with PandaID=6838989052
[2025-10-11 23:47:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:54:13]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:54:13] 2025-10-12 10:53:31,315 | INFO     | fitting pss+swap vs Time
[2025-10-12 06:54:13] 2025-10-12 10:53:31,316 | INFO     | sum of square deviations: 22484314869.295116
[2025-10-12 06:54:13] 2025-10-12 10:53:31,374 | INFO     | sum of deviations: 34436992328.25185
[2025-10-12 06:54:13] 2025-10-12 10:53:31,375 | INFO     | mean x: 1760253691.323741
[2025-10-12 06:54:13] 2025-10-12 10:53:31,375 | INFO     | mean y: 2081614.8129496402
[2025-10-12 06:54:13] 2025-10-12 10:53:31,375 | INFO     | -- intersect: -2693924165.940157
[2025-10-12 06:54:13] 2025-10-12 10:53:31,375 | INFO     | intersect: -2693924165.940157
[2025-10-12 06:54:13] 2025-10-12 10:53:31,375 | INFO     | chi2: 3.3293227138252384
[2025-10-12 06:54:13] 2025-10-12 10:53:31,376 | INFO     | sum of square deviations: 21685215478.76457
[2025-10-12 06:54:13] 2025-10-12 10:53:31,421 | INFO     | sum of deviations: 80686903820.5486
[2025-10-12 06:54:13] 2025-10-12 10:53:31,421 | INFO     | mean x: 1760253538.8276699
[2025-10-12 06:54:13] 2025-10-12 10:53:31,421 | INFO     | mean y: 2090385.0922330096
[2025-10-12 06:54:13] 2025-10-12 10:53:31,421 | INFO     | -- intersect: -6547505957.45977
[2025-10-12 06:54:13] 2025-10-12 10:53:31,421 | INFO     | intersect: -6547505957.45977
[2025-10-12 06:54:13] 2025-10-12 10:53:31,422 | INFO     | chi2: 2.0022938242799553
[2025-10-12 06:54:13] 2025-10-12 10:53:31,422 | INFO     | current chi2=2.0022938242799553 (change=39.858824259802326 %)
[2025-10-12 06:54:13] 2025-10-12 10:53:31,422 | INFO     | sum of square deviations: 20905279238.221146
[2025-10-12 06:54:13] 2025-10-12 10:53:31,430 | INFO     | sum of deviations: 84529095795.83783
[2025-10-12 06:54:13] 2025-10-12 10:53:31,430 | INFO     | mean x: 1760253386.3316953
[2025-10-12 06:54:13] 2025-10-12 10:53:31,430 | INFO     | mean y: 2091135.7567567567
[2025-10-12 06:54:13] 2025-10-12 10:53:31,430 | INFO     | -- intersect: -7115375482.251487
[2025-10-12 06:54:13] 2025-10-12 10:53:31,430 | INFO     | intersect: -7115375482.251487
[2025-10-12 06:54:13] 2025-10-12 10:53:31,431 | INFO     | chi2: 1.9926449568430376
[2025-10-12 06:54:13] 2025-10-12 10:53:31,431 | INFO     | current chi2=1.9926449568430376 (change=0.48189068556846587 %)
[2025-10-12 06:54:13] 2025-10-12 10:53:31,431 | INFO     | right removable region: 406
[2025-10-12 06:54:13] 2025-10-12 10:53:31,436 | INFO     | sum of square deviations: 21685158321.41753
[2025-10-12 06:54:13] 2025-10-12 10:53:31,444 | INFO     | sum of deviations: -27369951599.796104
[2025-10-12 06:54:13] 2025-10-12 10:53:31,444 | INFO     | mean x: 1760253843.8252428
[2025-10-12 06:54:13] 2025-10-12 10:53:31,445 | INFO     | mean y: 2093357.2111650486
[2025-10-12 06:54:13] 2025-10-12 10:53:31,445 | INFO     | -- intersect: 2223800102.200362
[2025-10-12 06:54:13] 2025-10-12 10:53:31,445 | INFO     | intersect: 2223800102.200362
[2025-10-12 06:54:13] 2025-10-12 10:53:31,445 | INFO     | chi2: 1.716019847640851
[2025-10-12 06:54:13] 2025-10-12 10:53:31,445 | INFO     | current chi2=1.716019847640851 (change=48.45738923069962 %)
[2025-10-12 06:54:13] 2025-10-12 10:53:31,446 | INFO     | sum of square deviations: 20905164923.538277
[2025-10-12 06:54:13] 2025-10-12 10:53:31,452 | INFO     | sum of deviations: -21421641540.788677
[2025-10-12 06:54:13] 2025-10-12 10:53:31,453 | INFO     | mean x: 1760253996.3267813
[2025-10-12 06:54:13] 2025-10-12 10:53:31,453 | INFO     | mean y: 2092181.3292383293
[2025-10-12 06:54:13] 2025-10-12 10:53:31,453 | INFO     | -- intersect: 1805834475.0624044
[2025-10-12 06:54:13] 2025-10-12 10:53:31,453 | INFO     | intersect: 1805834475.0624044
[2025-10-12 06:54:13] 2025-10-12 10:53:31,453 | INFO     | chi2: 1.6774425806128597
[2025-10-12 06:54:13] 2025-10-12 10:53:31,454 | INFO     | current chi2=1.6774425806128597 (change=2.248066482507565 %)
[2025-10-12 06:54:13] 2025-10-12 10:53:31,454 | INFO     | left removable region: 20
[2025-10-12 06:54:13] 2025-10-12 10:53:31,454 | INFO     | sum of square deviations: 17833354888.05434
[2025-10-12 06:54:13] 2025-10-12 10:53:31,461 | INFO     | sum of deviations: 47199086015.91445
[2025-10-12 06:54:13] 2025-10-12 10:53:31,461 | INFO     | mean x: 1760253965.8316061
[2025-10-12 06:54:13] 2025-10-12 10:53:31,461 | INFO     | mean y: 2098730.121761658
[2025-10-12 06:54:13] 2025-10-12 10:53:31,461 | INFO     | -- intersect: -4656720592.696358
[2025-10-12 06:54:13] 2025-10-12 10:53:31,462 | INFO     | intersect: -4656720592.696358
[2025-10-12 06:54:13] 2025-10-12 10:53:31,462 | INFO     | chi2: 0.13978735963313937
[2025-10-12 06:54:13] 2025-10-12 10:53:31,462 | INFO     | -- intersect: -4656720592.696358
[2025-10-12 06:54:13] 2025-10-12 10:53:31,462 | INFO     | current memory leak: 2.65 B/s (using 386 data points, chi2=0.14)
[2025-10-12 06:54:13] 2025-10-12 10:53:31,463 | INFO     | could have reported an average CPU frequency of 2915 MHz (17 samples)
[2025-10-12 06:54:13] 2025-10-12 10:53:31,467 | INFO     | ..............................
[2025-10-12 06:54:13] 2025-10-12 10:53:31,467 | INFO     | . Timing measurements:
[2025-10-12 06:54:13] 2025-10-12 10:53:31,467 | INFO     | . get job = 0 s
[2025-10-12 06:54:13] 2025-10-12 10:53:31,468 | INFO     | . initial setup = 3 s
[2025-10-12 06:54:13] 2025-10-12 10:53:31,468 | INFO     | . payload setup = 35 s
[2025-10-12 06:54:13] 2025-10-12 10:53:31,468 | INFO     | . stage-in = 0 s
[2025-10-12 06:54:13] 2025-10-12 10:53:31,468 | INFO     | . payload execution = 25403 s
[2025-10-12 06:54:13] 2025-10-12 10:53:31,468 | INFO     | . stage-out = 7 s
[2025-10-12 06:54:13] 2025-10-12 10:53:31,468 | INFO     | . log creation = 0 s
[2025-10-12 06:54:13] 2025-10-12 10:53:31,468 | INFO     | ..............................
[2025-10-12 06:54:13] 2025-10-12 10:53:31,576 | INFO     | time since job start (25529s) is within the limit (172800.0s)
[2025-10-12 06:54:13] 2025-10-12 10:53:32,173 | INFO     | 
[2025-10-12 06:54:13] 2025-10-12 10:53:32,173 | INFO     | job summary report
[2025-10-12 06:54:13] 2025-10-12 10:53:32,173 | INFO     | --------------------------------------------------
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | PanDA job id: 6838989052
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | task id: 46676269
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | errors: (none)
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | pilot state: finished 
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | transexitcode: 0
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | exeerrorcode: 0
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | exeerrordiag: 
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | exitcode: 0
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | exitmsg: OK
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | cpuconsumptiontime: 41466 s
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | nevents: 400
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | neventsw: 0
[2025-10-12 06:54:13] 2025-10-12 10:53:32,174 | INFO     | pid: 3088125
[2025-10-12 06:54:13] 2025-10-12 10:53:32,175 | INFO     | pgrp: 3088125
[2025-10-12 06:54:13] 2025-10-12 10:53:32,175 | INFO     | corecount: 8
[2025-10-12 06:54:13] 2025-10-12 10:53:32,175 | INFO     | event service: False
[2025-10-12 06:54:13] 2025-10-12 10:53:32,175 | INFO     | sizes: {0: 2348686, 1: 2348714, 2: 2348913, 13: 2348913, 23: 2348969, 30: 2349259, 34: 2349415, 25443: 2384659, 25444: 2384658, 25453: 2393768, 25470: 2393970}
[2025-10-12 06:54:13] 2025-10-12 10:53:32,175 | INFO     | --------------------------------------------------
[2025-10-12 06:54:13] 2025-10-12 10:53:32,175 | INFO     | 
[2025-10-12 06:54:13] 2025-10-12 10:53:32,175 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 06:54:13] 2025-10-12 10:53:32,289 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,289 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,289 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,289 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,290 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,290 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,290 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,290 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:54:13] 2025-10-12 10:53:32,290 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,290 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:54:13] 2025-10-12 10:53:32,290 | INFO     | job 6838989052 has completed (purged errors)
[2025-10-12 06:54:13] 2025-10-12 10:53:32,291 | INFO     | overall cleanup function is called
[2025-10-12 06:54:13] 2025-10-12 10:53:33,334 | INFO     | --- collectZombieJob: --- 10, [3088125]
[2025-10-12 06:54:13] 2025-10-12 10:53:33,334 | INFO     | zombie collector waiting for pid 3088125
[2025-10-12 06:54:13] 2025-10-12 10:53:33,334 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:54:13] 2025-10-12 10:53:33,335 | INFO     | collected zombie processes
[2025-10-12 06:54:13] 2025-10-12 10:53:33,335 | INFO     | will attempt to kill all subprocesses of pid=3088125
[2025-10-12 06:54:13] 2025-10-12 10:53:37,137 | INFO     | PID=3072921 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:54:13] 2025-10-12 10:53:37,138 | INFO     | .. there are 38 such processes running
[2025-10-12 06:54:13] 2025-10-12 10:53:37,235 | INFO     | process IDs to be killed: [3088125] (in reverse order)
[2025-10-12 06:54:13] 2025-10-12 10:53:37,468 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:54:13] 2025-10-12 10:53:37,468 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:54:13] 2025-10-12 10:53:37,484 | INFO     | did not find any defunct processes belonging to 3088125
[2025-10-12 06:54:13] 2025-10-12 10:53:37,501 | INFO     | did not find any defunct processes belonging to 3088125
[2025-10-12 06:54:13] 2025-10-12 10:53:37,502 | INFO     | ready for new job
[2025-10-12 06:54:13] 2025-10-12 10:53:37,502 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:54:13] 2025-10-12 10:53:37,505 | INFO     | ***************************************
[2025-10-12 06:54:13] 2025-10-12 10:53:37,505 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:54:13] 2025-10-12 10:53:37,505 | INFO     | ***************************************
[2025-10-12 06:54:13] 2025-10-12 10:53:37,506 | INFO     | 
[2025-10-12 06:54:13] 2025-10-12 10:53:37,539 | INFO     | architecture information:
[2025-10-12 06:54:13] 2025-10-12 10:53:37,575 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:54:13] 2025-10-12 10:53:37,661 | INFO     | cat /etc/os-release:
[2025-10-12 06:54:13] NAME="CentOS Linux"
[2025-10-12 06:54:13] VERSION="7 (Core)"
[2025-10-12 06:54:13] ID="centos"
[2025-10-12 06:54:13] ID_LIKE="rhel fedora"
[2025-10-12 06:54:13] VERSION_ID="7"
[2025-10-12 06:54:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:54:13] ANSI_COLOR="0;31"
[2025-10-12 06:54:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:54:13] HOME_URL="https://www.centos.org/"
[2025-10-12 06:54:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:54:13] 
[2025-10-12 06:54:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:54:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:54:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:54:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:54:13] 
[2025-10-12 06:54:13] 2025-10-12 10:53:37,662 | INFO     | ***************************************
[2025-10-12 06:54:13] 2025-10-12 10:53:38,165 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 06:54:13] 2025-10-12 10:53:38,254 | INFO     | sufficient remaining disk space (73963405312 B)
[2025-10-12 06:54:13] 2025-10-12 10:53:38,255 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:54:13] 2025-10-12 10:53:38,255 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:54:13] 2025-10-12 10:53:38,255 | INFO     | update_server=False
[2025-10-12 06:54:13] 2025-10-12 10:53:38,255 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:54:13] 2025-10-12 10:53:38,256 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:54:13] 2025-10-12 10:53:38,467 | INFO     | all job control threads have been joined
[2025-10-12 06:54:13] 2025-10-12 10:53:38,709 | INFO     | all payload control threads have been joined
[2025-10-12 06:54:13] 2025-10-12 10:53:38,816 | INFO     | all data control threads have been joined
[2025-10-12 06:54:13] 2025-10-12 10:53:39,131 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:54:13] 2025-10-12 10:53:39,136 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:54:13] 2025-10-12 10:53:39,136 | INFO     | aborting loop
[2025-10-12 06:54:13] 2025-10-12 10:53:39,261 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:39,473 | INFO     | [job] control thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:39,715 | INFO     | [payload] control thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:39,785 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:39,822 | INFO     | [data] control thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:39,974 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:39,998 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:40,142 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:40,284 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:40,636 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:40,646 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:40,646 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:40,647 | INFO     | [job] validate thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:40,647 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:41,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:54:13] 2025-10-12 10:53:42,142 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:43,140 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:54:13] 2025-10-12 10:53:49,434 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:54:13] 2025-10-12 10:53:49,765 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139848087508800)>', '<ExcThread(monitor, started 139847582852864)>']
[2025-10-12 06:54:13] 2025-10-12 10:53:54,796 | INFO     | all workflow threads have been joined
[2025-10-12 06:54:13] 2025-10-12 10:53:54,796 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:54:13] 2025-10-12 10:53:54,797 | INFO     | traces error code: 0
[2025-10-12 06:54:13] 2025-10-12 10:53:54,797 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:54:13] 2025-10-12 10:54:11,637 | INFO     | PID=3072921 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:54:13] 2025-10-12 10:54:11,638 | INFO     | .. there are 38 such processes running
[2025-10-12 06:54:13] 2025-10-12 10:54:11,638 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:54:13] 2025-10-12 10:54:11,639 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:54:13] 2025-10-12 10:54:11,639 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:54:13] 2025-10-12 10:54:11,639 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:54:13] 2025-10-12 10:54:11,639 | INFO     | [monitor] control thread has ended
[2025-10-12 06:54:13] 2025-10-12 10:54:13,066 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:54:13] 2025-10-12 10:54:13,085 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:54:13] 2025-10-12 10:54:13,098 [wrapper] pilotpid: 3072921
[2025-10-12 06:54:13] 2025-10-12 10:54:13,139 [wrapper] Pilot exit status: 0
[2025-10-12 06:54:13] 2025-10-12 10:54:13,399 [wrapper] pandaids: 6838989052
[2025-10-12 06:54:13] 2025-10-12 10:54:13,524 [wrapper] cleanup supervisor_pilot  350246 3072922
[2025-10-12 06:54:13] 2025-10-12 10:54:13,529 [wrapper] Test setup, not cleaning
[2025-10-12 06:54:13] 2025-10-12 10:54:13,533 [wrapper] apfmon messages muted
[2025-10-12 06:54:13] 2025-10-12 10:54:13,557 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:54:13] 2025-10-12 10:54:13,573 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:54:13]  *** Error codes and diagnostics ***
[2025-10-12 06:54:13]     "exeErrorCode": 0,
[2025-10-12 06:54:13]     "exeErrorDiag": "",
[2025-10-12 06:54:13]     "pilotErrorCode": 0,
[2025-10-12 06:54:13]     "pilotErrorDiag": "",
[2025-10-12 06:54:13]  *** Listing of results directory ***
[2025-10-12 06:54:13] total 422020
[2025-10-12 06:54:13] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 17:13 pilot3.tar.gz
[2025-10-12 06:54:13] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 17:35 queuedata.json
[2025-10-12 06:54:13] -rwx------. 1 boincer umatlas     36292 Oct 11 17:35 runpilot2-wrapper.sh
[2025-10-12 06:54:13] -rw-r--r--. 1 boincer umatlas       100 Oct 11 23:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:54:13] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 23:47 run_atlas
[2025-10-12 06:54:13] -rw-r--r--. 1 boincer umatlas       105 Oct 11 23:47 job.xml
[2025-10-12 06:54:13] -rw-r--r--. 2 boincer umatlas 222396774 Oct 11 23:47 EVNT.46676267._002625.pool.root.1
[2025-10-12 06:54:13] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 23:47 shared
[2025-10-12 06:54:13] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 23:47 input.tar.gz
[2025-10-12 06:54:13] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 23:47 start_atlas.sh
[2025-10-12 06:54:13] -rw-r--r--. 1 boincer umatlas         0 Oct 11 23:47 boinc_lockfile
[2025-10-12 06:54:13] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 23:47 pandaJob.out
[2025-10-12 06:54:13] -rw-------. 1 boincer umatlas    975512 Oct 11 23:47 agis_schedconf.cvmfs.json
[2025-10-12 06:54:13] drwx------. 5 boincer umatlas      4096 Oct 11 23:48 pilot3
[2025-10-12 06:54:13] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 06:49 init_data.xml
[2025-10-12 06:54:13] -rw-------. 1 boincer umatlas 198535296 Oct 12 06:51 HITS.46676269._065367.pool.root.1
[2025-10-12 06:54:13] -rw-r--r--. 1 boincer umatlas       531 Oct 12 06:51 boinc_task_state.xml
[2025-10-12 06:54:13] -rw-------. 1 boincer umatlas      1042 Oct 12 06:53 memory_monitor_summary.json
[2025-10-12 06:54:13] -rw-------. 1 boincer umatlas   1560580 Oct 12 06:53 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:54:13] -rw-------. 1 boincer umatlas    588763 Oct 12 06:53 log.46676269._065367.job.log.tgz.1
[2025-10-12 06:54:13] -rw-------. 1 boincer umatlas      7827 Oct 12 06:53 heartbeat.json
[2025-10-12 06:54:13] -rw-------. 1 boincer umatlas        95 Oct 12 06:53 pilot_heartbeat.json
[2025-10-12 06:54:13] -rw-------. 1 boincer umatlas       823 Oct 12 06:54 pilotlog.txt
[2025-10-12 06:54:13] -rw-r--r--. 1 boincer umatlas        28 Oct 12 06:54 wrapper_checkpoint.txt
[2025-10-12 06:54:13] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 06:54 boinc_mmap_file
[2025-10-12 06:54:13] -rw-------. 1 boincer umatlas   3066293 Oct 12 06:54 log.46676269._065367.job.log.1
[2025-10-12 06:54:13] -rw-------. 1 boincer umatlas       357 Oct 12 06:54 output.list
[2025-10-12 06:54:13] -rw-r--r--. 1 boincer umatlas       620 Oct 12 06:54 runtime_log
[2025-10-12 06:54:13] -rw-------. 1 boincer umatlas   3676160 Oct 12 06:54 result.tar.gz
[2025-10-12 06:54:13] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 06:54 runtime_log.err
[2025-10-12 06:54:13] -rw-------. 1 boincer umatlas       659 Oct 12 06:54 BqiMDmvQwR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwghNDmeKWDYo.diag
[2025-10-12 06:54:13] -rw-r--r--. 1 boincer umatlas     21169 Oct 12 06:54 stderr.txt
[2025-10-12 06:54:14] HITS file was successfully produced:
[2025-10-12 06:54:14] -rw-------. 1 boincer umatlas 198535296 Oct 12 06:51 shared/HITS.pool.root.1
[2025-10-12 06:54:14]  *** Contents of shared directory: ***
[2025-10-12 06:54:14] total 415248
[2025-10-12 06:54:14] -rw-r--r--. 2 boincer umatlas 222396774 Oct 11 23:47 ATLAS.root_0
[2025-10-12 06:54:14] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 23:47 input.tar.gz
[2025-10-12 06:54:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 23:47 start_atlas.sh
[2025-10-12 06:54:14] -rw-------. 1 boincer umatlas 198535296 Oct 12 06:51 HITS.pool.root.1
[2025-10-12 06:54:14] -rw-------. 1 boincer umatlas   3676160 Oct 12 06:54 result.tar.gz
06:54:15 (3065446): run_atlas exited; CPU time 42273.300415
06:54:15 (3065446): called boinc_finish(0)

</stderr_txt>
]]>

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