Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:53:47 (9155): wrapper (7.7.26015): starting
22:53:47 (9155): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 22:53:47] Arguments: --nthreads 8
[2025-10-11 22:53:47] Threads: 8
[2025-10-11 22:53:47] Checking for CVMFS
[2025-10-11 22:53:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:53:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:53:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:53:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:53:48] 2.11.2.0 1598 215628 124292 151604 0 59 19975195 20275201 917 130560 1 220137604 99.992 11682994 11160 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 22:53:48] CVMFS is ok
[2025-10-11 22:53:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:53:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:53:48] Further information can be found at the LHC@home message board.
[2025-10-11 22:53:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:53:48] Checking for apptainer binary...
[2025-10-11 22:53:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:53:48] Running /usr/bin/apptainer --version
[2025-10-11 22:53:48] apptainer version 1.3.2-1.el7
[2025-10-11 22:53:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:53:49] c-205-36.aglt2.org
[2025-10-11 22:53:49] apptainer works
[2025-10-11 22:53:49] Set ATHENA_PROC_NUMBER=8
[2025-10-11 22:53:49] Set ATHENA_CORE_NUMBER=8
[2025-10-11 22:53:49] Starting ATLAS job with PandaID=6838988990
[2025-10-11 22:53:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:00:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:00:25]  protocol_id=None
[2025-10-12 00:00:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 00:00:25]  replicas=None
[2025-10-12 00:00:25]  scope=mc23_13p6TeV
[2025-10-12 00:00:25]  status=None
[2025-10-12 00:00:25]  status_code=0
[2025-10-12 00:00:25]  storage_token=
[2025-10-12 00:00:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838988990/log.46676269._065305.job.log.tgz.1
[2025-10-12 00:00:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/12/log.46676269._065305.job.log.tgz.1
[2025-10-12 00:00:25]  workdir=None
[2025-10-12 00:00:25] ]
[2025-10-12 00:00:25] 2025-10-12 03:59:47,770 | INFO     | transferring file log.46676269._065305.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838988990/log.46676269._065305.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 00:00:25] 2025-10-12 03:59:47,770 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838988990/log.46676269._065305.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._065305.job
[2025-10-12 00:00:25] 2025-10-12 03:59:47,789 | INFO     | adding to output.list: log.46676269._065305.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/12/log.46676269._065305.job.log.tg
[2025-10-12 00:00:25] 2025-10-12 03:59:47,790 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 00:00:25] 2025-10-12 03:59:47,790 | INFO     | summary of transferred files:
[2025-10-12 00:00:25] 2025-10-12 03:59:47,790 | INFO     |  -- lfn=log.46676269._065305.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 00:00:25] 2025-10-12 03:59:47,790 | INFO     | stage-out finished correctly
[2025-10-12 00:00:25] 2025-10-12 03:59:47,852 | INFO     | time since job start (3946s) is within the limit (172800.0s)
[2025-10-12 00:00:25] 2025-10-12 03:59:47,924 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 00:00:25] 2025-10-12 03:59:49,475 | INFO     | job 6838988990 has state=finished
[2025-10-12 00:00:25] 2025-10-12 03:59:49,476 | INFO     | preparing for final server update for job 6838988990 in state='finished'
[2025-10-12 00:00:25] 2025-10-12 03:59:49,476 | INFO     | this job has now completed (state=finished)
[2025-10-12 00:00:25] 2025-10-12 03:59:49,477 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 00:00:25] 2025-10-12 03:59:49,477 | INFO     | log transfer has been attempted: DONE
[2025-10-12 00:00:25] 2025-10-12 03:59:49,477 | INFO     | job 6838988990 has finished - writing final server update
[2025-10-12 00:00:25] 2025-10-12 03:59:49,477 | INFO     | total number of processed events: 400 (read)
[2025-10-12 00:00:25] 2025-10-12 03:59:49,478 | INFO     | executing command: lscpu
[2025-10-12 00:00:25] 2025-10-12 03:59:49,510 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 00:00:25] 2025-10-12 03:59:49,856 | INFO     | time since job start (3948s) is within the limit (172800.0s)
[2025-10-12 00:00:25] 2025-10-12 03:59:51,743 | WARNING  | process 19225 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 00:00:25] 2025-10-12 03:59:51,744 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838988990/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:00:25] 2025-10-12 03:59:51,820 | INFO     | number of running child processes to parent process 19225: 1
[2025-10-12 00:00:25] 2025-10-12 03:59:51,820 | INFO     | maximum number of monitored processes: 6
[2025-10-12 00:00:25] 2025-10-12 03:59:51,862 | INFO     | time since job start (3950s) is within the limit (172800.0s)
[2025-10-12 00:00:25] 2025-10-12 03:59:53,604 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 00:00:25] 2025-10-12 03:59:53,608 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2069.8695000000002
[2025-10-12 00:00:25] 2025-10-12 03:59:53,612 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838988990/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 00:00:25] 2025-10-12 03:59:53,613 | INFO     | extracted standard info from prmon json
[2025-10-12 00:00:25] 2025-10-12 03:59:53,613 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 00:00:25] 2025-10-12 03:59:53,613 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 00:00:25] 2025-10-12 03:59:53,613 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 00:00:25] 2025-10-12 03:59:53,613 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 00:00:25] 2025-10-12 03:59:53,615 | INFO     | fitting pss+swap vs Time
[2025-10-12 00:00:25] 2025-10-12 03:59:53,615 | INFO     | sum of square deviations: 60482994.5
[2025-10-12 00:00:25] 2025-10-12 03:59:53,616 | INFO     | sum of deviations: -5307882181.999999
[2025-10-12 00:00:25] 2025-10-12 03:59:53,616 | INFO     | mean x: 1760239710.5
[2025-10-12 00:00:25] 2025-10-12 03:59:53,616 | INFO     | mean y: 2588414.275862069
[2025-10-12 00:00:25] 2025-10-12 03:59:53,616 | INFO     | -- intersect: 154478157500.2573
[2025-10-12 00:00:25] 2025-10-12 03:59:53,616 | INFO     | intersect: 154478157500.2573
[2025-10-12 00:00:25] 2025-10-12 03:59:53,616 | INFO     | chi2: 0.041794120226988904
[2025-10-12 00:00:25] 2025-10-12 03:59:53,617 | INFO     | -- intersect: 154478157500.2573
[2025-10-12 00:00:25] 2025-10-12 03:59:53,617 | INFO     | current memory leak: -87.76 B/s (using 58 data points, chi2=0.04)
[2025-10-12 00:00:25] 2025-10-12 03:59:53,617 | INFO     | could have reported an average CPU frequency of 2268 MHz (6 samples)
[2025-10-12 00:00:25] 2025-10-12 03:59:53,617 | INFO     | ..............................
[2025-10-12 00:00:25] 2025-10-12 03:59:53,617 | INFO     | . Timing measurements:
[2025-10-12 00:00:25] 2025-10-12 03:59:53,618 | INFO     | . get job = 0 s
[2025-10-12 00:00:25] 2025-10-12 03:59:53,618 | INFO     | . initial setup = 2 s
[2025-10-12 00:00:25] 2025-10-12 03:59:53,618 | INFO     | . payload setup = 5 s
[2025-10-12 00:00:25] 2025-10-12 03:59:53,618 | INFO     | . stage-in = 0 s
[2025-10-12 00:00:25] 2025-10-12 03:59:53,618 | INFO     | . payload execution = 3920 s
[2025-10-12 00:00:25] 2025-10-12 03:59:53,618 | INFO     | . stage-out = 0 s
[2025-10-12 00:00:25] 2025-10-12 03:59:53,618 | INFO     | . log creation = 0 s
[2025-10-12 00:00:25] 2025-10-12 03:59:53,618 | INFO     | ..............................
[2025-10-12 00:00:25] 2025-10-12 03:59:53,699 | INFO     | 
[2025-10-12 00:00:25] 2025-10-12 03:59:53,699 | INFO     | job summary report
[2025-10-12 00:00:25] 2025-10-12 03:59:53,699 | INFO     | --------------------------------------------------
[2025-10-12 00:00:25] 2025-10-12 03:59:53,699 | INFO     | PanDA job id: 6838988990
[2025-10-12 00:00:25] 2025-10-12 03:59:53,699 | INFO     | task id: 46676269
[2025-10-12 00:00:25] 2025-10-12 03:59:53,699 | INFO     | errors: (none)
[2025-10-12 00:00:25] 2025-10-12 03:59:53,699 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:00:25] 2025-10-12 03:59:53,699 | INFO     | pilot state: finished 
[2025-10-12 00:00:25] 2025-10-12 03:59:53,699 | INFO     | transexitcode: 0
[2025-10-12 00:00:25] 2025-10-12 03:59:53,700 | INFO     | exeerrorcode: 0
[2025-10-12 00:00:25] 2025-10-12 03:59:53,700 | INFO     | exeerrordiag: 
[2025-10-12 00:00:25] 2025-10-12 03:59:53,700 | INFO     | exitcode: 0
[2025-10-12 00:00:25] 2025-10-12 03:59:53,700 | INFO     | exitmsg: OK
[2025-10-12 00:00:25] 2025-10-12 03:59:53,700 | INFO     | cpuconsumptiontime: 29198 s
[2025-10-12 00:00:25] 2025-10-12 03:59:53,700 | INFO     | nevents: 400
[2025-10-12 00:00:25] 2025-10-12 03:59:53,700 | INFO     | neventsw: 0
[2025-10-12 00:00:25] 2025-10-12 03:59:53,700 | INFO     | pid: 19225
[2025-10-12 00:00:25] 2025-10-12 03:59:53,700 | INFO     | pgrp: 19225
[2025-10-12 00:00:25] 2025-10-12 03:59:53,701 | INFO     | corecount: 8
[2025-10-12 00:00:25] 2025-10-12 03:59:53,701 | INFO     | event service: False
[2025-10-12 00:00:25] 2025-10-12 03:59:53,701 | INFO     | sizes: {0: 2348028, 1: 2348884, 5: 2349146, 12: 2349202, 3930: 2375124, 3931: 2384306, 3937: 2384444}
[2025-10-12 00:00:25] 2025-10-12 03:59:53,701 | INFO     | --------------------------------------------------
[2025-10-12 00:00:25] 2025-10-12 03:59:53,701 | INFO     | 
[2025-10-12 00:00:25] 2025-10-12 03:59:53,701 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 00:00:25] 2025-10-12 03:59:53,722 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,722 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,722 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,722 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,722 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,723 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,724 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:00:25] 2025-10-12 03:59:53,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,724 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:00:25] 2025-10-12 03:59:53,725 | INFO     | job 6838988990 has completed (purged errors)
[2025-10-12 00:00:25] 2025-10-12 03:59:53,725 | INFO     | overall cleanup function is called
[2025-10-12 00:00:25] 2025-10-12 03:59:54,732 | INFO     | --- collectZombieJob: --- 10, [19225]
[2025-10-12 00:00:25] 2025-10-12 03:59:54,732 | INFO     | zombie collector waiting for pid 19225
[2025-10-12 00:00:25] 2025-10-12 03:59:54,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:00:25] 2025-10-12 03:59:54,733 | INFO     | collected zombie processes
[2025-10-12 00:00:25] 2025-10-12 03:59:54,733 | INFO     | will attempt to kill all subprocesses of pid=19225
[2025-10-12 00:00:25] 2025-10-12 03:59:54,845 | INFO     | process IDs to be killed: [19225] (in reverse order)
[2025-10-12 00:00:25] 2025-10-12 03:59:54,901 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:00:25] 2025-10-12 03:59:54,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:00:25] 2025-10-12 03:59:54,904 | INFO     | did not find any defunct processes belonging to 19225
[2025-10-12 00:00:25] 2025-10-12 03:59:54,907 | INFO     | did not find any defunct processes belonging to 19225
[2025-10-12 00:00:25] 2025-10-12 03:59:54,907 | INFO     | ready for new job
[2025-10-12 00:00:25] 2025-10-12 03:59:54,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:00:25] 2025-10-12 03:59:54,909 | INFO     | ***************************************
[2025-10-12 00:00:25] 2025-10-12 03:59:54,909 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:00:25] 2025-10-12 03:59:54,909 | INFO     | ***************************************
[2025-10-12 00:00:25] 2025-10-12 03:59:54,909 | INFO     | 
[2025-10-12 00:00:25] 2025-10-12 03:59:54,910 | INFO     | architecture information:
[2025-10-12 00:00:25] 2025-10-12 03:59:54,910 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:00:25] 2025-10-12 03:59:54,925 | INFO     | cat /etc/os-release:
[2025-10-12 00:00:25] NAME="CentOS Linux"
[2025-10-12 00:00:25] VERSION="7 (Core)"
[2025-10-12 00:00:25] ID="centos"
[2025-10-12 00:00:25] ID_LIKE="rhel fedora"
[2025-10-12 00:00:25] VERSION_ID="7"
[2025-10-12 00:00:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:00:25] ANSI_COLOR="0;31"
[2025-10-12 00:00:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:00:25] HOME_URL="https://www.centos.org/"
[2025-10-12 00:00:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:00:25] 
[2025-10-12 00:00:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:00:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:00:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:00:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:00:25] 
[2025-10-12 00:00:25] 2025-10-12 03:59:54,925 | INFO     | ***************************************
[2025-10-12 00:00:25] 2025-10-12 03:59:55,428 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 00:00:25] 2025-10-12 03:59:55,446 | INFO     | sufficient remaining disk space (32689356800 B)
[2025-10-12 00:00:25] 2025-10-12 03:59:55,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:00:25] 2025-10-12 03:59:55,447 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:00:25] 2025-10-12 03:59:55,447 | INFO     | update_server=False
[2025-10-12 00:00:25] 2025-10-12 03:59:55,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:00:25] 2025-10-12 03:59:55,448 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:00:25] 2025-10-12 03:59:55,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:00:25] 2025-10-12 03:59:55,448 | INFO     | aborting loop
[2025-10-12 00:00:25] 2025-10-12 03:59:55,624 | INFO     | all data control threads have been joined
[2025-10-12 00:00:25] 2025-10-12 03:59:55,849 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:00:25] 2025-10-12 03:59:56,451 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:56,453 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:56,453 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:56,629 | INFO     | [data] control thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:56,630 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:56,717 | INFO     | all job control threads have been joined
[2025-10-12 00:00:25] 2025-10-12 03:59:56,889 | INFO     | all payload control threads have been joined
[2025-10-12 00:00:25] 2025-10-12 03:59:57,061 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:57,642 | INFO     | [job] validate thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:57,722 | INFO     | [job] control thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:57,743 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:57,854 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:57,886 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:57,892 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:57,893 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:57,894 | INFO     | [payload] control thread has finished
[2025-10-12 00:00:25] 2025-10-12 03:59:58,515 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:00:25] 2025-10-12 04:00:02,521 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:00:25] 2025-10-12 04:00:06,083 | INFO     | job.realtimelogging is not enabled
[2025-10-12 00:00:25] 2025-10-12 04:00:07,088 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:00:25] 2025-10-12 04:00:07,379 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:00:25] 2025-10-12 04:00:08,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140650716837696)>', '<ExcThread(monitor, started 140650280367872)>']
[2025-10-12 00:00:25] 2025-10-12 04:00:13,592 | INFO     | all workflow threads have been joined
[2025-10-12 00:00:25] 2025-10-12 04:00:13,592 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:00:25] 2025-10-12 04:00:13,592 | INFO     | traces error code: 0
[2025-10-12 00:00:25] 2025-10-12 04:00:13,593 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:00:25] 2025-10-12 04:00:25,093 | INFO     | PID=12818 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 00:00:25] 2025-10-12 04:00:25,093 | INFO     | .. there are 2 such processes running
[2025-10-12 00:00:25] 2025-10-12 04:00:25,093 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:00:25] 2025-10-12 04:00:25,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:00:25] 2025-10-12 04:00:25,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:00:25] 2025-10-12 04:00:25,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:00:25] 2025-10-12 04:00:25,094 | INFO     | [monitor] control thread has ended
[2025-10-12 00:00:25] 2025-10-12 04:00:25,188 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:00:25] 2025-10-12 04:00:25,191 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:00:25] 2025-10-12 04:00:25,194 [wrapper] pilotpid: 12818
[2025-10-12 00:00:25] 2025-10-12 04:00:25,197 [wrapper] Pilot exit status: 0
[2025-10-12 00:00:25] 2025-10-12 04:00:25,209 [wrapper] pandaids: 6838988990
[2025-10-12 00:00:25] 2025-10-12 04:00:25,242 [wrapper] cleanup supervisor_pilot 32095 12819
[2025-10-12 00:00:25] 2025-10-12 04:00:25,245 [wrapper] Test setup, not cleaning
[2025-10-12 00:00:25] 2025-10-12 04:00:25,248 [wrapper] apfmon messages muted
[2025-10-12 00:00:25] 2025-10-12 04:00:25,251 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:00:25] 2025-10-12 04:00:25,253 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:00:25]  *** Error codes and diagnostics ***
[2025-10-12 00:00:25]     "exeErrorCode": 0,
[2025-10-12 00:00:25]     "exeErrorDiag": "",
[2025-10-12 00:00:25]     "pilotErrorCode": 0,
[2025-10-12 00:00:25]     "pilotErrorDiag": "",
[2025-10-12 00:00:25]  *** Listing of results directory ***
[2025-10-12 00:00:25] total 412708
[2025-10-12 00:00:25] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 17:13 pilot3.tar.gz
[2025-10-12 00:00:25] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 17:22 queuedata.json
[2025-10-12 00:00:25] -rwx------ 1 boincer umatlas     36292 Oct 11 17:23 runpilot2-wrapper.sh
[2025-10-12 00:00:25] -rw-r--r-- 1 boincer umatlas       100 Oct 11 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:00:25] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 22:53 run_atlas
[2025-10-12 00:00:25] -rw-r--r-- 1 boincer umatlas       105 Oct 11 22:53 job.xml
[2025-10-12 00:00:25] -rw-r--r-- 2 boincer umatlas 222766560 Oct 11 22:53 EVNT.46676267._002622.pool.root.1
[2025-10-12 00:00:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 22:53 start_atlas.sh
[2025-10-12 00:00:25] drwxrwx--x 2 boincer umatlas      4096 Oct 11 22:53 shared
[2025-10-12 00:00:25] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 22:53 input.tar.gz
[2025-10-12 00:00:25] -rw-r--r-- 1 boincer umatlas         0 Oct 11 22:53 boinc_lockfile
[2025-10-12 00:00:25] -rw-r--r-- 1 boincer umatlas      2549 Oct 11 22:53 pandaJob.out
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas    975496 Oct 11 22:53 agis_schedconf.cvmfs.json
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas   1560580 Oct 11 22:54 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:00:25] drwx------ 5 boincer umatlas      4096 Oct 11 22:54 pilot3
[2025-10-12 00:00:25] -rw-r--r-- 1 boincer umatlas      6135 Oct 11 23:57 init_data.xml
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas 194102007 Oct 11 23:59 HITS.46676269._065305.pool.root.1
[2025-10-12 00:00:25] -rw-r--r-- 1 boincer umatlas       529 Oct 11 23:59 boinc_task_state.xml
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas      1047 Oct 11 23:59 memory_monitor_summary.json
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas    330325 Oct 11 23:59 log.46676269._065305.job.log.tgz.1
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas        95 Oct 11 23:59 pilot_heartbeat.json
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas      7841 Oct 11 23:59 heartbeat.json
[2025-10-12 00:00:25] -rw-r--r-- 1 boincer umatlas        27 Oct 12 00:00 wrapper_checkpoint.txt
[2025-10-12 00:00:25] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 00:00 boinc_mmap_file
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas       820 Oct 12 00:00 pilotlog.txt
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas    593175 Oct 12 00:00 log.46676269._065305.job.log.1
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas       357 Oct 12 00:00 output.list
[2025-10-12 00:00:25] -rw-r--r-- 1 boincer umatlas       620 Oct 12 00:00 runtime_log
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas    942080 Oct 12 00:00 result.tar.gz
[2025-10-12 00:00:25] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 00:00 runtime_log.err
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas       658 Oct 12 00:00 gsVNDmAFwR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmXdSMDmZWbPXn.diag
[2025-10-12 00:00:25] -rw-r--r-- 1 boincer umatlas     21724 Oct 12 00:00 stderr.txt
[2025-10-12 00:00:25] HITS file was successfully produced:
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas 194102007 Oct 11 23:59 shared/HITS.pool.root.1
[2025-10-12 00:00:25]  *** Contents of shared directory: ***
[2025-10-12 00:00:25] total 408604
[2025-10-12 00:00:25] -rw-r--r-- 2 boincer umatlas 222766560 Oct 11 22:53 ATLAS.root_0
[2025-10-12 00:00:25] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 22:53 start_atlas.sh
[2025-10-12 00:00:25] -rw-r--r-- 2 boincer umatlas    569678 Oct 11 22:53 input.tar.gz
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas 194102007 Oct 11 23:59 HITS.pool.root.1
[2025-10-12 00:00:25] -rw------- 1 boincer umatlas    942080 Oct 12 00:00 result.tar.gz
00:00:27 (9155): run_atlas exited; CPU time 29208.392287
00:00:27 (9155): called boinc_finish(0)

</stderr_txt>
]]>

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