Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:48:44 (406902): wrapper (7.7.26015): starting
22:48:44 (406902): wrapper: running run_atlas (--nthreads 11)
[2025-10-11 22:48:44] Arguments: --nthreads 11
[2025-10-11 22:48:44] Threads: 11
[2025-10-11 22:48:44] Checking for CVMFS
[2025-10-11 22:48:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:48:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:48:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:48:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:48:45] 2.13.2.0 3214202 128681 767608 151604 3 642 22283659 25181184 35190 16776704 0 104858999 99.537 120930661 22712 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 22:48:45] CVMFS is ok
[2025-10-11 22:48:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:48:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:48:45] Further information can be found at the LHC@home message board.
[2025-10-11 22:48:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:48:45] Checking for apptainer binary...
[2025-10-11 22:48:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:48:45] Running /usr/bin/apptainer --version
[2025-10-11 22:48:45] apptainer version 1.4.3-1.el9
[2025-10-11 22:48:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:48:45] c-16-37.aglt2.org
[2025-10-11 22:48:45] apptainer works
[2025-10-11 22:48:45] Set ATHENA_PROC_NUMBER=11
[2025-10-11 22:48:45] Set ATHENA_CORE_NUMBER=11
[2025-10-11 22:48:45] Starting ATLAS job with PandaID=6838989601
[2025-10-11 22:48:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:59:54]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:59:54] 2025-10-12 13:21:54,159 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 09:59:54] 2025-10-12 13:21:54,160 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:59:54] 2025-10-12 13:21:54,173 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:59:54] 2025-10-12 13:21:54,174 | INFO     | sum of square deviations: 74258558983.926
[2025-10-12 09:59:54] 2025-10-12 13:21:54,183 | INFO     | sum of deviations: -103485319913.8147
[2025-10-12 09:59:54] 2025-10-12 13:21:54,184 | INFO     | mean x: 1760256328.4074075
[2025-10-12 09:59:54] 2025-10-12 13:21:54,184 | INFO     | mean y: 2185392.351046699
[2025-10-12 09:59:54] 2025-10-12 13:21:54,184 | INFO     | -- intersect: 2455245238.4892936
[2025-10-12 09:59:54] 2025-10-12 13:21:54,184 | INFO     | intersect: 2455245238.4892936
[2025-10-12 09:59:54] 2025-10-12 13:21:54,185 | INFO     | chi2: 5.913309219714791
[2025-10-12 09:59:54] 2025-10-12 13:21:54,186 | INFO     | sum of square deviations: 72479517763.9415
[2025-10-12 09:59:54] 2025-10-12 13:21:54,196 | INFO     | sum of deviations: 39436678293.90251
[2025-10-12 09:59:54] 2025-10-12 13:21:54,196 | INFO     | mean x: 1760256175.918831
[2025-10-12 09:59:54] 2025-10-12 13:21:54,196 | INFO     | mean y: 2197619.698051948
[2025-10-12 09:59:54] 2025-10-12 13:21:54,197 | INFO     | -- intersect: -955571673.8374763
[2025-10-12 09:59:54] 2025-10-12 13:21:54,197 | INFO     | intersect: -955571673.8374763
[2025-10-12 09:59:54] 2025-10-12 13:21:54,198 | INFO     | chi2: 2.857779936867752
[2025-10-12 09:59:54] 2025-10-12 13:21:54,198 | INFO     | current chi2=2.857779936867752 (change=51.67207005951927 %)
[2025-10-12 09:59:54] 2025-10-12 13:21:54,199 | INFO     | sum of square deviations: 70728940615.05737
[2025-10-12 09:59:54] 2025-10-12 13:21:54,208 | INFO     | sum of deviations: 56780426449.58099
[2025-10-12 09:59:54] 2025-10-12 13:21:54,209 | INFO     | mean x: 1760256023.4222586
[2025-10-12 09:59:54] 2025-10-12 13:21:54,209 | INFO     | mean y: 2199130.854337152
[2025-10-12 09:59:54] 2025-10-12 13:21:54,209 | INFO     | -- intersect: -1410915314.2541716
[2025-10-12 09:59:54] 2025-10-12 13:21:54,209 | INFO     | intersect: -1410915314.2541716
[2025-10-12 09:59:54] 2025-10-12 13:21:54,210 | INFO     | chi2: 2.820013210661881
[2025-10-12 09:59:54] 2025-10-12 13:21:54,210 | INFO     | current chi2=2.820013210661881 (change=1.3215407428209778 %)
[2025-10-12 09:59:54] 2025-10-12 13:21:54,210 | INFO     | right removable region: 610
[2025-10-12 09:59:54] 2025-10-12 13:21:54,211 | INFO     | sum of square deviations: 72478984623.94153
[2025-10-12 09:59:54] 2025-10-12 13:21:54,292 | INFO     | sum of deviations: -226330915832.513
[2025-10-12 09:59:54] 2025-10-12 13:21:54,292 | INFO     | mean x: 1760256480.918831
[2025-10-12 09:59:54] 2025-10-12 13:21:54,292 | INFO     | mean y: 2195902.50974026
[2025-10-12 09:59:54] 2025-10-12 13:21:54,293 | INFO     | -- intersect: 5498968015.054958
[2025-10-12 09:59:54] 2025-10-12 13:21:54,296 | INFO     | intersect: 5498968015.054958
[2025-10-12 09:59:54] 2025-10-12 13:21:54,297 | INFO     | chi2: 3.845938585629314
[2025-10-12 09:59:54] 2025-10-12 13:21:54,297 | INFO     | current chi2=3.845938585629314 (change=34.961314507161696 %)
[2025-10-12 09:59:54] 2025-10-12 13:21:54,298 | INFO     | sum of square deviations: 70728174085.3617
[2025-10-12 09:59:54] 2025-10-12 13:21:54,328 | INFO     | time since job start (37963s) is within the limit (172800.0s)
[2025-10-12 09:59:54] 2025-10-12 13:21:54,415 | INFO     | sum of deviations: -257385054967.14883
[2025-10-12 09:59:54] 2025-10-12 13:21:54,422 | INFO     | mean x: 1760256633.4255319
[2025-10-12 09:59:54] 2025-10-12 13:21:54,422 | INFO     | mean y: 2198595.4582651393
[2025-10-12 09:59:54] 2025-10-12 13:21:54,422 | INFO     | -- intersect: 6407902633.621573
[2025-10-12 09:59:54] 2025-10-12 13:21:54,422 | INFO     | intersect: 6407902633.621573
[2025-10-12 09:59:54] 2025-10-12 13:21:54,423 | INFO     | chi2: 3.6074728154351616
[2025-10-12 09:59:54] 2025-10-12 13:21:54,423 | INFO     | current chi2=3.6074728154351616 (change=6.200457050593589 %)
[2025-10-12 09:59:54] 2025-10-12 13:21:54,424 | INFO     | left removable region: 20
[2025-10-12 09:59:54] 2025-10-12 13:21:54,425 | INFO     | sum of square deviations: 63683101332.85431
[2025-10-12 09:59:54] 2025-10-12 13:21:54,551 | INFO     | sum of deviations: -68667366444.82379
[2025-10-12 09:59:54] 2025-10-12 13:21:54,562 | INFO     | mean x: 1760256602.9559321
[2025-10-12 09:59:54] 2025-10-12 13:21:54,562 | INFO     | mean y: 2210813.006779661
[2025-10-12 09:59:54] 2025-10-12 13:21:54,562 | INFO     | -- intersect: 1900236861.712064
[2025-10-12 09:59:54] 2025-10-12 13:21:54,563 | INFO     | intersect: 1900236861.712064
[2025-10-12 09:59:54] 2025-10-12 13:21:54,563 | INFO     | chi2: 0.43877940846484276
[2025-10-12 09:59:54] 2025-10-12 13:21:54,564 | INFO     | -- intersect: 1900236861.712064
[2025-10-12 09:59:54] 2025-10-12 13:21:54,564 | INFO     | current memory leak: -1.08 B/s (using 590 data points, chi2=0.44)
[2025-10-12 09:59:54] 2025-10-12 13:21:54,565 | INFO     | could have reported an average CPU frequency of 2804 MHz (24 samples)
[2025-10-12 09:59:54] 2025-10-12 13:21:54,565 | INFO     | ..............................
[2025-10-12 09:59:54] 2025-10-12 13:21:54,670 | INFO     | . Timing measurements:
[2025-10-12 09:59:54] 2025-10-12 13:21:54,670 | INFO     | . get job = 0 s
[2025-10-12 09:59:54] 2025-10-12 13:21:54,670 | INFO     | . initial setup = 3 s
[2025-10-12 09:59:54] 2025-10-12 13:21:54,670 | INFO     | . payload setup = 16 s
[2025-10-12 09:59:54] 2025-10-12 13:21:54,671 | INFO     | . stage-in = 0 s
[2025-10-12 09:59:54] 2025-10-12 13:21:54,671 | INFO     | . payload execution = 37835 s
[2025-10-12 09:59:54] 2025-10-12 13:21:54,671 | INFO     | . stage-out = 8 s
[2025-10-12 09:59:54] 2025-10-12 13:21:54,671 | INFO     | . log creation = 1 s
[2025-10-12 09:59:54] 2025-10-12 13:21:54,671 | INFO     | ..............................
[2025-10-12 09:59:54] 2025-10-12 13:21:55,725 | INFO     | 
[2025-10-12 09:59:54] 2025-10-12 13:21:55,726 | INFO     | job summary report
[2025-10-12 09:59:54] 2025-10-12 13:21:55,726 | INFO     | --------------------------------------------------
[2025-10-12 09:59:54] 2025-10-12 13:21:55,726 | INFO     | PanDA job id: 6838989601
[2025-10-12 09:59:54] 2025-10-12 13:21:55,726 | INFO     | task id: 46676269
[2025-10-12 09:59:54] 2025-10-12 13:21:55,726 | INFO     | errors: (none)
[2025-10-12 09:59:54] 2025-10-12 13:21:55,726 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:59:54] 2025-10-12 13:21:55,727 | INFO     | pilot state: finished 
[2025-10-12 09:59:54] 2025-10-12 13:21:55,727 | INFO     | transexitcode: 0
[2025-10-12 09:59:54] 2025-10-12 13:21:55,727 | INFO     | exeerrorcode: 0
[2025-10-12 09:59:54] 2025-10-12 13:21:55,727 | INFO     | exeerrordiag: 
[2025-10-12 09:59:54] 2025-10-12 13:21:55,727 | INFO     | exitcode: 0
[2025-10-12 09:59:54] 2025-10-12 13:21:55,727 | INFO     | exitmsg: OK
[2025-10-12 09:59:54] 2025-10-12 13:21:55,727 | INFO     | cpuconsumptiontime: 53564 s
[2025-10-12 09:59:54] 2025-10-12 13:21:55,728 | INFO     | nevents: 400
[2025-10-12 09:59:54] 2025-10-12 13:21:55,761 | INFO     | neventsw: 0
[2025-10-12 09:59:54] 2025-10-12 13:21:55,761 | INFO     | pid: 429488
[2025-10-12 09:59:54] 2025-10-12 13:21:55,761 | INFO     | pgrp: 429488
[2025-10-12 09:59:54] 2025-10-12 13:21:55,761 | INFO     | corecount: 11
[2025-10-12 09:59:54] 2025-10-12 13:21:55,761 | INFO     | event service: False
[2025-10-12 09:59:54] 2025-10-12 13:21:55,761 | INFO     | sizes: {0: 2348680, 1: 2348879, 12: 2348879, 14: 2349169, 23: 2349197, 37858: 2389342, 37867: 2398340, 37868: 2398396, 37931: 2398590}
[2025-10-12 09:59:54] 2025-10-12 13:21:55,762 | INFO     | --------------------------------------------------
[2025-10-12 09:59:54] 2025-10-12 13:21:55,764 | INFO     | 
[2025-10-12 09:59:54] 2025-10-12 13:21:55,764 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 09:59:54] 2025-10-12 13:21:55,913 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,934 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,934 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,934 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,936 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:59:54] 2025-10-12 13:21:55,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,936 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:59:54] 2025-10-12 13:21:55,937 | INFO     | job 6838989601 has completed (purged errors)
[2025-10-12 09:59:54] 2025-10-12 13:21:55,937 | INFO     | overall cleanup function is called
[2025-10-12 09:59:54] 2025-10-12 13:21:56,981 | INFO     | --- collectZombieJob: --- 10, [429488]
[2025-10-12 09:59:54] 2025-10-12 13:21:57,050 | INFO     | zombie collector waiting for pid 429488
[2025-10-12 09:59:54] 2025-10-12 13:21:57,050 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:59:54] 2025-10-12 13:21:57,050 | INFO     | collected zombie processes
[2025-10-12 09:59:54] 2025-10-12 13:21:57,050 | INFO     | will attempt to kill all subprocesses of pid=429488
[2025-10-12 09:59:54] 2025-10-12 13:22:00,929 | INFO     | process IDs to be killed: [429488] (in reverse order)
[2025-10-12 09:59:54] 2025-10-12 13:22:02,019 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:59:54] 2025-10-12 13:22:02,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:59:54] 2025-10-12 13:22:02,104 | INFO     | did not find any defunct processes belonging to 429488
[2025-10-12 09:59:54] 2025-10-12 13:22:02,142 | INFO     | did not find any defunct processes belonging to 429488
[2025-10-12 09:59:54] 2025-10-12 13:22:02,143 | INFO     | ready for new job
[2025-10-12 09:59:54] 2025-10-12 13:22:02,143 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:59:54] 2025-10-12 13:22:02,151 | INFO     | ***************************************
[2025-10-12 09:59:54] 2025-10-12 13:22:02,151 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:59:54] 2025-10-12 13:22:02,152 | INFO     | ***************************************
[2025-10-12 09:59:54] 2025-10-12 13:22:02,152 | INFO     | 
[2025-10-12 09:59:54] 2025-10-12 13:22:02,197 | INFO     | architecture information:
[2025-10-12 09:59:54] 2025-10-12 13:22:02,210 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:59:54] 2025-10-12 13:22:02,260 | INFO     | cat /etc/os-release:
[2025-10-12 09:59:54] NAME="CentOS Linux"
[2025-10-12 09:59:54] VERSION="7 (Core)"
[2025-10-12 09:59:54] ID="centos"
[2025-10-12 09:59:54] ID_LIKE="rhel fedora"
[2025-10-12 09:59:54] VERSION_ID="7"
[2025-10-12 09:59:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:59:54] ANSI_COLOR="0;31"
[2025-10-12 09:59:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:59:54] HOME_URL="https://www.centos.org/"
[2025-10-12 09:59:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:59:54] 
[2025-10-12 09:59:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:59:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:59:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:59:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:59:54] 
[2025-10-12 09:59:54] 2025-10-12 13:22:02,260 | INFO     | ***************************************
[2025-10-12 09:59:54] 2025-10-12 13:22:02,764 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 09:59:54] 2025-10-12 13:22:02,805 | INFO     | sufficient remaining disk space (62079893504 B)
[2025-10-12 09:59:54] 2025-10-12 13:22:02,806 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:59:54] 2025-10-12 13:22:02,806 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:59:54] 2025-10-12 13:22:02,806 | INFO     | update_server=False
[2025-10-12 09:59:54] 2025-10-12 13:22:02,806 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:59:54] 2025-10-12 13:22:02,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:59:54] 2025-10-12 13:22:02,916 | INFO     | all job control threads have been joined
[2025-10-12 09:59:54] 2025-10-12 13:22:03,290 | INFO     | all payload control threads have been joined
[2025-10-12 09:59:54] 2025-10-12 13:22:03,371 | INFO     | all data control threads have been joined
[2025-10-12 09:59:54] 2025-10-12 13:22:03,577 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:59:54] 2025-10-12 13:22:03,637 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:59:54] 2025-10-12 13:22:03,637 | INFO     | aborting loop
[2025-10-12 09:59:54] 2025-10-12 13:22:03,813 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:03,922 | INFO     | [job] control thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:04,000 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:04,000 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:04,065 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:04,311 | INFO     | [payload] control thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:04,326 | INFO     | [job] validate thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:04,390 | INFO     | [data] control thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:04,552 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:04,664 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:04,664 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:04,709 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:04,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:59:54] 2025-10-12 13:22:04,854 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:05,588 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:05,818 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:06,860 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:59:54] 2025-10-12 13:22:32,131 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:59:54] 2025-10-12 13:22:33,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140188741916480)>', '<ExcThread(monitor, started 140188244231936)>']
[2025-10-12 09:59:54] 2025-10-12 13:22:33,219 | INFO     | PID=413623 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 09:59:54] 2025-10-12 13:22:33,219 | INFO     | .. there are 50 such processes running
[2025-10-12 09:59:54] 2025-10-12 13:22:33,227 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:59:54] 2025-10-12 13:22:33,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:59:54] 2025-10-12 13:22:33,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:59:54] 2025-10-12 13:22:33,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:59:54] 2025-10-12 13:22:33,227 | INFO     | [monitor] control thread has ended
[2025-10-12 09:59:54] 2025-10-12 13:22:38,165 | INFO     | all workflow threads have been joined
[2025-10-12 09:59:54] 2025-10-12 13:22:38,165 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:59:54] 2025-10-12 13:22:38,165 | INFO     | traces error code: 0
[2025-10-12 09:59:54] 2025-10-12 13:22:38,189 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:59:54] 2025-10-12 13:22:39,326 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:59:54] 2025-10-12 13:22:39,389 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:59:54] 2025-10-12 13:22:39,460 [wrapper] pilotpid: 413623
[2025-10-12 09:59:54] 2025-10-12 13:22:39,480 [wrapper] Pilot exit status: 0
[2025-10-12 09:59:54] 2025-10-12 13:22:39,602 [wrapper] pandaids: 6838989601
[2025-10-12 09:59:54] 2025-10-12 13:22:40,449 [wrapper] cleanup supervisor_pilot 2781452 413624
[2025-10-12 09:59:54] 2025-10-12 13:22:40,493 [wrapper] Test setup, not cleaning
[2025-10-12 09:59:54] 2025-10-12 13:22:40,525 [wrapper] apfmon messages muted
[2025-10-12 09:59:54] 2025-10-12 13:22:40,539 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:59:54] 2025-10-12 13:22:40,590 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:59:54]  *** Error codes and diagnostics ***
[2025-10-12 09:59:54]     "exeErrorCode": 0,
[2025-10-12 09:59:54]     "exeErrorDiag": "",
[2025-10-12 09:59:54]     "pilotErrorCode": 0,
[2025-10-12 09:59:54]     "pilotErrorDiag": "",
[2025-10-12 09:59:54]  *** Listing of results directory ***
[2025-10-12 09:59:54] total 422764
[2025-10-12 09:59:54] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 17:39 pilot3.tar.gz
[2025-10-12 09:59:54] -rwx------. 1 boincer umatlas     36292 Oct 11 17:49 runpilot2-wrapper.sh
[2025-10-12 09:59:54] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 17:49 queuedata.json
[2025-10-12 09:59:54] -rw-r--r--. 1 boincer umatlas       100 Oct 11 22:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:59:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 22:48 run_atlas
[2025-10-12 09:59:54] -rw-r--r--. 1 boincer umatlas       105 Oct 11 22:48 job.xml
[2025-10-12 09:59:54] -rw-r--r--. 2 boincer umatlas 221629240 Oct 11 22:48 EVNT.46676267._002632.pool.root.1
[2025-10-12 09:59:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:48 start_atlas.sh
[2025-10-12 09:59:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 22:48 shared
[2025-10-12 09:59:54] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 22:48 input.tar.gz
[2025-10-12 09:59:54] -rw-r--r--. 1 boincer umatlas         0 Oct 11 22:48 boinc_lockfile
[2025-10-12 09:59:54] -rw-r--r--. 1 boincer umatlas      2547 Oct 11 22:48 pandaJob.out
[2025-10-12 09:59:54] -rw-------. 1 boincer umatlas    975496 Oct 11 22:49 agis_schedconf.cvmfs.json
[2025-10-12 09:59:54] drwx------. 5 boincer umatlas      4096 Oct 11 22:49 pilot3
[2025-10-12 09:59:54] -rw-------. 1 boincer umatlas 198240864 Oct 12 09:16 HITS.46676269._065509.pool.root.1
[2025-10-12 09:59:54] -rw-r--r--. 1 boincer umatlas       530 Oct 12 09:16 boinc_task_state.xml
[2025-10-12 09:59:54] -rw-------. 1 boincer umatlas      1044 Oct 12 09:20 memory_monitor_summary.json
[2025-10-12 09:59:54] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:59:54] -rw-------. 1 boincer umatlas    726603 Oct 12 09:20 log.46676269._065509.job.log.tgz.1
[2025-10-12 09:59:54] -rw-------. 1 boincer umatlas      7832 Oct 12 09:21 heartbeat.json
[2025-10-12 09:59:54] -rw-------. 1 boincer umatlas        95 Oct 12 09:22 pilot_heartbeat.json
[2025-10-12 09:59:54] -rw-------. 1 boincer umatlas      4823 Oct 12 09:22 pilotlog.txt
[2025-10-12 09:59:54] -rw-------. 1 boincer umatlas   3845160 Oct 12 09:22 log.46676269._065509.job.log.1
[2025-10-12 09:59:54] -rw-------. 1 boincer umatlas       357 Oct 12 09:22 output.list
[2025-10-12 09:59:54] -rw-r--r--. 1 boincer umatlas       620 Oct 12 09:22 runtime_log
[2025-10-12 09:59:54] -rw-------. 1 boincer umatlas   4587520 Oct 12 09:22 result.tar.gz
[2025-10-12 09:59:54] -rw-------. 1 boincer umatlas       656 Oct 12 09:22 Zt1NDmydwR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEihNDmHdhL5n.diag
[2025-10-12 09:59:54] -rw-r--r--. 1 boincer umatlas      8701 Oct 12 09:22 runtime_log.err
[2025-10-12 09:59:54] -rw-r--r--. 1 boincer umatlas      6613 Oct 12 09:54 init_data.xml
[2025-10-12 09:59:54] -rw-r--r--. 1 boincer umatlas        27 Oct 12 09:59 wrapper_checkpoint.txt
[2025-10-12 09:59:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 09:59 boinc_mmap_file
[2025-10-12 09:59:54] -rw-r--r--. 1 boincer umatlas     20999 Oct 12 09:59 stderr.txt
[2025-10-12 09:59:55] HITS file was successfully produced:
[2025-10-12 09:59:55] -rw-------. 1 boincer umatlas 198240864 Oct 12 09:16 shared/HITS.pool.root.1
[2025-10-12 09:59:55]  *** Contents of shared directory: ***
[2025-10-12 09:59:55] total 415092
[2025-10-12 09:59:55] -rw-r--r--. 2 boincer umatlas 221629240 Oct 11 22:48 ATLAS.root_0
[2025-10-12 09:59:55] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:48 start_atlas.sh
[2025-10-12 09:59:55] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 22:48 input.tar.gz
[2025-10-12 09:59:55] -rw-------. 1 boincer umatlas 198240864 Oct 12 09:16 HITS.pool.root.1
[2025-10-12 09:59:55] -rw-------. 1 boincer umatlas   4587520 Oct 12 09:22 result.tar.gz
09:59:57 (406902): run_atlas exited; CPU time 55275.389619
09:59:57 (406902): called boinc_finish(0)

</stderr_txt>
]]>

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