Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
14:43:51 (887512): wrapper (7.7.26015): starting
14:43:51 (887512): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 14:43:51] Arguments: --nthreads 4
[2025-10-13 14:43:51] Threads: 4
[2025-10-13 14:43:51] Checking for CVMFS
[2025-10-13 14:43:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:43:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:43:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:43:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:43:55] 2.12.7.0 772463 10067 70328 151661 3 188 2580195 4096000 917 130560 0 12056699 99.994 353742 458 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.210:3128 0
[2025-10-13 14:43:55] CVMFS is ok
[2025-10-13 14:43:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:43:55] Checking for apptainer binary...
[2025-10-13 14:43:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:43:55] Running /usr/bin/apptainer --version
[2025-10-13 14:43:55] apptainer version 1.4.2
[2025-10-13 14:43:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:43:55] TC-M800
[2025-10-13 14:43:55] apptainer works
[2025-10-13 14:43:55] Set ATHENA_PROC_NUMBER=4
[2025-10-13 14:43:55] Set ATHENA_CORE_NUMBER=4
[2025-10-13 14:43:55] Starting ATLAS job with PandaID=6838988954
[2025-10-13 14:43:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc2/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 16:55:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 16:55:22] 2025-10-13 14:54:49,329 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 16:55:22] 2025-10-13 14:54:49,331 | INFO     | fitting pss+swap vs Time
[2025-10-13 16:55:22] 2025-10-13 14:54:49,331 | INFO     | sum of square deviations: 665612480.0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,332 | INFO     | sum of deviations: -9348880374.0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,332 | INFO     | mean x: 1760363365.0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,332 | INFO     | mean y: 2371554.023255814
[2025-10-13 16:55:22] 2025-10-13 14:54:49,332 | INFO     | -- intersect: 24727608848.487892
[2025-10-13 16:55:22] 2025-10-13 14:54:49,332 | INFO     | intersect: 24727608848.487892
[2025-10-13 16:55:22] 2025-10-13 14:54:49,332 | INFO     | chi2: 1.9744604750139536
[2025-10-13 16:55:22] 2025-10-13 14:54:49,332 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,333 | INFO     | sum of deviations: -1183204251.000002
[2025-10-13 16:55:22] 2025-10-13 14:54:49,333 | INFO     | mean x: 1760363212.5
[2025-10-13 16:55:22] 2025-10-13 14:54:49,333 | INFO     | mean y: 2387758.7258064514
[2025-10-13 16:55:22] 2025-10-13 14:54:49,333 | INFO     | -- intersect: 3525664622.633264
[2025-10-13 16:55:22] 2025-10-13 14:54:49,333 | INFO     | intersect: 3525664622.633264
[2025-10-13 16:55:22] 2025-10-13 14:54:49,333 | INFO     | chi2: 1.2133081155479832
[2025-10-13 16:55:22] 2025-10-13 14:54:49,333 | INFO     | current chi2=1.2133081155479832 (change=38.549890924536804 %)
[2025-10-13 16:55:22] 2025-10-13 14:54:49,333 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,334 | INFO     | sum of deviations: -1394461281.0000007
[2025-10-13 16:55:22] 2025-10-13 14:54:49,334 | INFO     | mean x: 1760363060.0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,334 | INFO     | mean y: 2387299.3865546216
[2025-10-13 16:55:22] 2025-10-13 14:54:49,334 | INFO     | -- intersect: 4700463623.018035
[2025-10-13 16:55:22] 2025-10-13 14:54:49,334 | INFO     | intersect: 4700463623.018035
[2025-10-13 16:55:22] 2025-10-13 14:54:49,334 | INFO     | chi2: 1.2112019151208107
[2025-10-13 16:55:22] 2025-10-13 14:54:49,334 | INFO     | current chi2=1.2112019151208107 (change=0.17359155520206218 %)
[2025-10-13 16:55:22] 2025-10-13 14:54:49,334 | INFO     | right removable region: 118
[2025-10-13 16:55:22] 2025-10-13 14:54:49,335 | INFO     | sum of square deviations: 591173875.0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,335 | INFO     | sum of deviations: -21059679467.0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,335 | INFO     | mean x: 1760363517.5
[2025-10-13 16:55:22] 2025-10-13 14:54:49,335 | INFO     | mean y: 2394871.5161290322
[2025-10-13 16:55:22] 2025-10-13 14:54:49,335 | INFO     | -- intersect: 62712695498.29982
[2025-10-13 16:55:22] 2025-10-13 14:54:49,335 | INFO     | intersect: 62712695498.29982
[2025-10-13 16:55:22] 2025-10-13 14:54:49,335 | INFO     | chi2: 0.8897164795236321
[2025-10-13 16:55:22] 2025-10-13 14:54:49,335 | INFO     | current chi2=0.8897164795236321 (change=54.938754622710576 %)
[2025-10-13 16:55:22] 2025-10-13 14:54:49,336 | INFO     | sum of square deviations: 522502820.0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,336 | INFO     | sum of deviations: -17707018451.0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,336 | INFO     | mean x: 1760363670.0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,336 | INFO     | mean y: 2387413.806722689
[2025-10-13 16:55:22] 2025-10-13 14:54:49,336 | INFO     | -- intersect: 59659083592.32701
[2025-10-13 16:55:22] 2025-10-13 14:54:49,336 | INFO     | intersect: 59659083592.32701
[2025-10-13 16:55:22] 2025-10-13 14:54:49,337 | INFO     | chi2: 0.8847462450835579
[2025-10-13 16:55:22] 2025-10-13 14:54:49,337 | INFO     | current chi2=0.8847462450835579 (change=0.5586312667531237 %)
[2025-10-13 16:55:22] 2025-10-13 14:54:49,337 | INFO     | left removable region: 20
[2025-10-13 16:55:22] 2025-10-13 14:54:49,337 | INFO     | sum of square deviations: 291817564.5
[2025-10-13 16:55:22] 2025-10-13 14:54:49,337 | INFO     | sum of deviations: -3419682448.0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,337 | INFO     | mean x: 1760363639.5
[2025-10-13 16:55:22] 2025-10-13 14:54:49,337 | INFO     | mean y: 2386707.0408163266
[2025-10-13 16:55:22] 2025-10-13 14:54:49,337 | INFO     | -- intersect: 20631318520.68958
[2025-10-13 16:55:22] 2025-10-13 14:54:49,337 | INFO     | intersect: 20631318520.68958
[2025-10-13 16:55:22] 2025-10-13 14:54:49,338 | INFO     | chi2: 0.055850500417671645
[2025-10-13 16:55:22] 2025-10-13 14:54:49,338 | INFO     | -- intersect: 20631318520.68958
[2025-10-13 16:55:22] 2025-10-13 14:54:49,338 | INFO     | current memory leak: -11.72 B/s (using 98 data points, chi2=0.06)
[2025-10-13 16:55:22] 2025-10-13 14:54:49,338 | INFO     | could have reported an average CPU frequency of 3699 MHz (8 samples)
[2025-10-13 16:55:22] 2025-10-13 14:54:49,338 | INFO     | ..............................
[2025-10-13 16:55:22] 2025-10-13 14:54:49,338 | INFO     | . Timing measurements:
[2025-10-13 16:55:22] 2025-10-13 14:54:49,338 | INFO     | . get job = 0 s
[2025-10-13 16:55:22] 2025-10-13 14:54:49,338 | INFO     | . initial setup = 1 s
[2025-10-13 16:55:22] 2025-10-13 14:54:49,338 | INFO     | . payload setup = 3 s
[2025-10-13 16:55:22] 2025-10-13 14:54:49,338 | INFO     | . stage-in = 0 s
[2025-10-13 16:55:22] 2025-10-13 14:54:49,338 | INFO     | . payload execution = 7821 s
[2025-10-13 16:55:22] 2025-10-13 14:54:49,339 | INFO     | . stage-out = 0 s
[2025-10-13 16:55:22] 2025-10-13 14:54:49,339 | INFO     | . log creation = 0 s
[2025-10-13 16:55:22] 2025-10-13 14:54:49,339 | INFO     | ..............................
[2025-10-13 16:55:22] 2025-10-13 14:54:49,404 | INFO     | 
[2025-10-13 16:55:22] 2025-10-13 14:54:49,404 | INFO     | job summary report
[2025-10-13 16:55:22] 2025-10-13 14:54:49,404 | INFO     | --------------------------------------------------
[2025-10-13 16:55:22] 2025-10-13 14:54:49,404 | INFO     | PanDA job id: 6838988954
[2025-10-13 16:55:22] 2025-10-13 14:54:49,404 | INFO     | task id: 46676269
[2025-10-13 16:55:22] 2025-10-13 14:54:49,404 | INFO     | errors: (none)
[2025-10-13 16:55:22] 2025-10-13 14:54:49,404 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 16:55:22] 2025-10-13 14:54:49,404 | INFO     | pilot state: finished 
[2025-10-13 16:55:22] 2025-10-13 14:54:49,404 | INFO     | transexitcode: 0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,404 | INFO     | exeerrorcode: 0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,404 | INFO     | exeerrordiag: 
[2025-10-13 16:55:22] 2025-10-13 14:54:49,404 | INFO     | exitcode: 0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,404 | INFO     | exitmsg: OK
[2025-10-13 16:55:22] 2025-10-13 14:54:49,405 | INFO     | cpuconsumptiontime: 30229 s
[2025-10-13 16:55:22] 2025-10-13 14:54:49,405 | INFO     | nevents: 400
[2025-10-13 16:55:22] 2025-10-13 14:54:49,405 | INFO     | neventsw: 0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,405 | INFO     | pid: 897621
[2025-10-13 16:55:22] 2025-10-13 14:54:49,405 | INFO     | pgrp: 897621
[2025-10-13 16:55:22] 2025-10-13 14:54:49,405 | INFO     | corecount: 4
[2025-10-13 16:55:22] 2025-10-13 14:54:49,405 | INFO     | event service: False
[2025-10-13 16:55:22] 2025-10-13 14:54:49,405 | INFO     | sizes: {0: 2348631, 1: 2348886, 3: 2349148, 11: 2349176, 7828: 2376826, 7829: 2385826, 7832: 2386010, 7834: 2386204}
[2025-10-13 16:55:22] 2025-10-13 14:54:49,405 | INFO     | --------------------------------------------------
[2025-10-13 16:55:22] 2025-10-13 14:54:49,405 | INFO     | 
[2025-10-13 16:55:22] 2025-10-13 14:54:49,405 | INFO     | executing command: ls -lF /var/lib/boinc2/slots/0
[2025-10-13 16:55:22] 2025-10-13 14:54:49,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,418 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,418 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,418 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,419 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,419 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 16:55:22] 2025-10-13 14:54:49,419 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,419 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 16:55:22] 2025-10-13 14:54:49,419 | INFO     | job 6838988954 has completed (purged errors)
[2025-10-13 16:55:22] 2025-10-13 14:54:49,419 | INFO     | overall cleanup function is called
[2025-10-13 16:55:22] 2025-10-13 14:54:50,426 | INFO     | --- collectZombieJob: --- 10, [897621]
[2025-10-13 16:55:22] 2025-10-13 14:54:50,426 | INFO     | zombie collector waiting for pid 897621
[2025-10-13 16:55:22] 2025-10-13 14:54:50,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 16:55:22] 2025-10-13 14:54:50,426 | INFO     | collected zombie processes
[2025-10-13 16:55:22] 2025-10-13 14:54:50,426 | INFO     | will attempt to kill all subprocesses of pid=897621
[2025-10-13 16:55:22] 2025-10-13 14:54:50,490 | INFO     | process IDs to be killed: [897621] (in reverse order)
[2025-10-13 16:55:22] 2025-10-13 14:54:50,516 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 16:55:22] 2025-10-13 14:54:50,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 16:55:22] 2025-10-13 14:54:50,519 | INFO     | did not find any defunct processes belonging to 897621
[2025-10-13 16:55:22] 2025-10-13 14:54:50,520 | INFO     | did not find any defunct processes belonging to 897621
[2025-10-13 16:55:22] 2025-10-13 14:54:50,521 | INFO     | ready for new job
[2025-10-13 16:55:22] 2025-10-13 14:54:50,521 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 16:55:22] 2025-10-13 14:54:50,522 | INFO     | ***************************************
[2025-10-13 16:55:22] 2025-10-13 14:54:50,522 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 16:55:22] 2025-10-13 14:54:50,522 | INFO     | ***************************************
[2025-10-13 16:55:22] 2025-10-13 14:54:50,522 | INFO     | 
[2025-10-13 16:55:22] 2025-10-13 14:54:50,523 | INFO     | architecture information:
[2025-10-13 16:55:22] 2025-10-13 14:54:50,523 | INFO     | executing command: cat /etc/os-release
[2025-10-13 16:55:22] 2025-10-13 14:54:50,532 | INFO     | cat /etc/os-release:
[2025-10-13 16:55:22] NAME="CentOS Linux"
[2025-10-13 16:55:22] VERSION="7 (Core)"
[2025-10-13 16:55:22] ID="centos"
[2025-10-13 16:55:22] ID_LIKE="rhel fedora"
[2025-10-13 16:55:22] VERSION_ID="7"
[2025-10-13 16:55:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 16:55:22] ANSI_COLOR="0;31"
[2025-10-13 16:55:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 16:55:22] HOME_URL="https://www.centos.org/"
[2025-10-13 16:55:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 16:55:22] 
[2025-10-13 16:55:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 16:55:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 16:55:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 16:55:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 16:55:22] 
[2025-10-13 16:55:22] 2025-10-13 14:54:50,532 | INFO     | ***************************************
[2025-10-13 16:55:22] 2025-10-13 14:54:51,035 | INFO     | executing command: df -mP /var/lib/boinc2/slots/0
[2025-10-13 16:55:22] 2025-10-13 14:54:51,044 | INFO     | sufficient remaining disk space (90457505792 B)
[2025-10-13 16:55:22] 2025-10-13 14:54:51,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 16:55:22] 2025-10-13 14:54:51,045 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 16:55:22] 2025-10-13 14:54:51,045 | INFO     | update_server=False
[2025-10-13 16:55:22] 2025-10-13 14:54:51,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 16:55:22] 2025-10-13 14:54:51,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:55:22] 2025-10-13 14:54:51,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 16:55:22] 2025-10-13 14:54:51,045 | INFO     | aborting loop
[2025-10-13 16:55:22] 2025-10-13 14:54:51,199 | INFO     | all job control threads have been joined
[2025-10-13 16:55:22] 2025-10-13 14:54:51,915 | INFO     | all data control threads have been joined
[2025-10-13 16:55:22] 2025-10-13 14:54:51,924 | INFO     | all payload control threads have been joined
[2025-10-13 16:55:22] 2025-10-13 14:54:52,049 | INFO     | [job] queue monitor thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:52,049 | INFO     | [job] retrieve thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:52,051 | INFO     | [job] job monitor thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:52,092 | INFO     | [payload] failed_post thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:52,188 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 16:55:22] 2025-10-13 14:54:52,204 | INFO     | [job] control thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:52,443 | INFO     | [data] copytool_in thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:52,571 | INFO     | [job] validate thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:52,618 | INFO     | [payload] validate_post thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:52,811 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 16:55:22] 2025-10-13 14:54:52,836 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:52,882 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:52,920 | INFO     | [data] control thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:52,929 | INFO     | [payload] control thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:53,009 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:54,192 | INFO     | [data] copytool_out thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:54:56,817 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:55:01,839 | INFO     | job.realtimelogging is not enabled
[2025-10-13 16:55:22] 2025-10-13 14:55:02,844 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 16:55:22] 2025-10-13 14:55:13,932 | INFO     | [monitor] cgroup control has ended
[2025-10-13 16:55:22] 2025-10-13 14:55:15,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140155923302208)>', '<ExcThread(monitor, started 140155444782848)>']
[2025-10-13 16:55:22] 2025-10-13 14:55:20,129 | INFO     | all workflow threads have been joined
[2025-10-13 16:55:22] 2025-10-13 14:55:20,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 16:55:22] 2025-10-13 14:55:20,129 | INFO     | traces error code: 0
[2025-10-13 16:55:22] 2025-10-13 14:55:20,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 16:55:22] 2025-10-13 14:55:21,806 | INFO     | PID=891209 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 16:55:22] 2025-10-13 14:55:21,806 | INFO     | .. there are 2 such processes running
[2025-10-13 16:55:22] 2025-10-13 14:55:21,807 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 16:55:22] 2025-10-13 14:55:21,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 16:55:22] 2025-10-13 14:55:21,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 16:55:22] 2025-10-13 14:55:21,807 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 16:55:22] 2025-10-13 14:55:21,807 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 16:55:22] 2025-10-13 14:55:21,807 | INFO     | [monitor] control thread has ended
[2025-10-13 16:55:22] 2025-10-13 14:55:21,880 [wrapper] ==== pilot stdout END ====
[2025-10-13 16:55:22] 2025-10-13 14:55:21,882 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 16:55:22] 2025-10-13 14:55:21,884 [wrapper] pilotpid: 891209
[2025-10-13 16:55:22] 2025-10-13 14:55:21,886 [wrapper] Pilot exit status: 0
[2025-10-13 16:55:22] 2025-10-13 14:55:21,892 [wrapper] pandaids: 6838988954
[2025-10-13 16:55:22] 2025-10-13 14:55:21,909 [wrapper] cleanup supervisor_pilot  921460 891210
[2025-10-13 16:55:22] 2025-10-13 14:55:21,911 [wrapper] Test setup, not cleaning
[2025-10-13 16:55:22] 2025-10-13 14:55:21,913 [wrapper] apfmon messages muted
[2025-10-13 16:55:22] 2025-10-13 14:55:21,915 [wrapper] ==== wrapper stdout END ====
[2025-10-13 16:55:22] 2025-10-13 14:55:21,917 [wrapper] ==== wrapper stderr END ====
[2025-10-13 16:55:22]  *** Error codes and diagnostics ***
[2025-10-13 16:55:22]     "exeErrorCode": 0,
[2025-10-13 16:55:22]     "exeErrorDiag": "",
[2025-10-13 16:55:22]     "pilotErrorCode": 0,
[2025-10-13 16:55:22]     "pilotErrorDiag": "",
[2025-10-13 16:55:22]  *** Listing of results directory ***
[2025-10-13 16:55:22] insgesamt 410212
[2025-10-13 16:55:22] -rw-r--r-- 1 boinc boinc    557409 11. Okt 23:13 pilot3.tar.gz
[2025-10-13 16:55:22] -rw-r--r-- 1 boinc boinc      5112 11. Okt 23:22 queuedata.json
[2025-10-13 16:55:22] -rwx------ 1 boinc boinc     36292 11. Okt 23:22 runpilot2-wrapper.sh
[2025-10-13 16:55:22] -rw-r--r-- 1 boinc boinc       100 13. Okt 14:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 16:55:22] -rwxr-xr-x 1 boinc boinc      7986 13. Okt 14:43 run_atlas
[2025-10-13 16:55:22] -rw-r--r-- 1 boinc boinc       105 13. Okt 14:43 job.xml
[2025-10-13 16:55:22] -rw-r--r-- 2 boinc boinc 221486981 13. Okt 14:43 EVNT.46676267._002621.pool.root.1
[2025-10-13 16:55:22] -rw-r--r-- 2 boinc boinc     15120 13. Okt 14:43 start_atlas.sh
[2025-10-13 16:55:22] drwxrwx--x 2 boinc boinc      4096 13. Okt 14:43 shared
[2025-10-13 16:55:22] -rw-r--r-- 2 boinc boinc    569680 13. Okt 14:43 input.tar.gz
[2025-10-13 16:55:22] -rw-r--r-- 1 boinc boinc      6702 13. Okt 14:43 init_data.xml
[2025-10-13 16:55:22] -rw-r--r-- 1 boinc boinc         0 13. Okt 14:43 boinc_lockfile
[2025-10-13 16:55:22] -rw-r--r-- 1 boinc boinc      2550 13. Okt 14:43 pandaJob.out
[2025-10-13 16:55:22] -rw------- 1 boinc boinc    972497 13. Okt 14:44 agis_schedconf.cvmfs.json
[2025-10-13 16:55:22] -rw------- 1 boinc boinc   1560580 13. Okt 14:44 agis_ddmendpoints.agis.ALL.json
[2025-10-13 16:55:22] drwx------ 5 boinc boinc      4096 13. Okt 14:44 pilot3
[2025-10-13 16:55:22] -rw------- 1 boinc boinc 191807433 13. Okt 16:54 HITS.46676269._065269.pool.root.1
[2025-10-13 16:55:22] -rw-r--r-- 1 boinc boinc       529 13. Okt 16:54 boinc_task_state.xml
[2025-10-13 16:55:22] -rw------- 1 boinc boinc      1017 13. Okt 16:54 memory_monitor_summary.json
[2025-10-13 16:55:22] -rw------- 1 boinc boinc    308028 13. Okt 16:54 log.46676269._065269.job.log.tgz.1
[2025-10-13 16:55:22] -rw------- 1 boinc boinc      7757 13. Okt 16:54 heartbeat.json
[2025-10-13 16:55:22] -rw-r--r-- 1 boinc boinc      8192 13. Okt 16:55 boinc_mmap_file
[2025-10-13 16:55:22] -rw-r--r-- 1 boinc boinc        27 13. Okt 16:55 wrapper_checkpoint.txt
[2025-10-13 16:55:22] -rw------- 1 boinc boinc       891 13. Okt 16:55 pilotlog.txt
[2025-10-13 16:55:22] -rw------- 1 boinc boinc        95 13. Okt 16:55 pilot_heartbeat.json
[2025-10-13 16:55:22] -rw------- 1 boinc boinc   1125702 13. Okt 16:55 log.46676269._065269.job.log.1
[2025-10-13 16:55:22] -rw------- 1 boinc boinc       357 13. Okt 16:55 output.list
[2025-10-13 16:55:22] -rw-r--r-- 1 boinc boinc       620 13. Okt 16:55 runtime_log
[2025-10-13 16:55:22] -rw------- 1 boinc boinc   1454080 13. Okt 16:55 result.tar.gz
[2025-10-13 16:55:22] -rw------- 1 boinc boinc       644 13. Okt 16:55 vlvLDmCEwR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0fhNDmgSstnm.diag
[2025-10-13 16:55:22] -rw-r--r-- 1 boinc boinc      8677 13. Okt 16:55 runtime_log.err
[2025-10-13 16:55:22] -rw-r--r-- 1 boinc boinc     20533 13. Okt 16:55 stderr.txt
[2025-10-13 16:55:22] HITS file was successfully produced:
[2025-10-13 16:55:22] -rw------- 1 boinc boinc 191807433 13. Okt 16:54 shared/HITS.pool.root.1
[2025-10-13 16:55:22]  *** Contents of shared directory: ***
[2025-10-13 16:55:22] insgesamt 405612
[2025-10-13 16:55:22] -rw-r--r-- 2 boinc boinc 221486981 13. Okt 14:43 ATLAS.root_0
[2025-10-13 16:55:22] -rw-r--r-- 2 boinc boinc     15120 13. Okt 14:43 start_atlas.sh
[2025-10-13 16:55:22] -rw-r--r-- 2 boinc boinc    569680 13. Okt 14:43 input.tar.gz
[2025-10-13 16:55:22] -rw------- 1 boinc boinc 191807433 13. Okt 16:54 HITS.pool.root.1
[2025-10-13 16:55:22] -rw------- 1 boinc boinc   1454080 13. Okt 16:55 result.tar.gz
16:55:23 (887512): run_atlas exited; CPU time 30300.440748
16:55:23 (887512): called boinc_finish(0)

</stderr_txt>
]]>

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