Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:58:55 (2277831): wrapper (7.7.26015): starting
19:58:55 (2277831): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 19:58:55] Arguments: --nthreads 12
[2025-10-11 19:58:55] Threads: 12
[2025-10-11 19:58:55] Checking for CVMFS
[2025-10-11 19:58:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:58:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:58:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:58:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:58:56] 2.11.5.0 2096 29350 249704 151604 0 648 42245369 45568001 17433 130560 0 304677092 99.875 122760586 25224 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-10-11 19:58:56] CVMFS is ok
[2025-10-11 19:58:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:58:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:58:56] Further information can be found at the LHC@home message board.
[2025-10-11 19:58:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:58:56] Checking for apptainer binary...
[2025-10-11 19:58:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:58:56] Running /usr/bin/apptainer --version
[2025-10-11 19:58:56] apptainer version 1.4.1-1.el9
[2025-10-11 19:58:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:58:56] wns0053.triumf.lcg
[2025-10-11 19:58:56] apptainer works
[2025-10-11 19:58:57] Set ATHENA_PROC_NUMBER=12
[2025-10-11 19:58:57] Set ATHENA_CORE_NUMBER=12
[2025-10-11 19:58:57] Starting ATLAS job with PandaID=6839163281
[2025-10-11 19:58:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:03:48]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:03:48] 2025-10-12 03:03:15,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:03:48] 2025-10-12 03:03:15,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:03:48] 2025-10-12 03:03:15,622 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | WARNING  | wrong length of table data, x=[1760238032.0], y=[937.0] (must be same and length>=4)
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | could have reported an average CPU frequency of 2627 MHz (4 samples)
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | ..............................
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . Timing measurements:
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . get job = 0 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . initial setup = 4 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . payload setup = 16 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . stage-in = 0 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . payload execution = 44 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . stage-out = 0 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,624 | INFO     | . log creation = 0 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,624 | INFO     | ..............................
[2025-10-11 20:03:48] 2025-10-12 03:03:15,624 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 20:03:48] 2025-10-12 03:03:15,624 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839163281/pilotlog.txt
[2025-10-11 20:03:48] 2025-10-12 03:03:15,643 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 20:03:48] - Log from pilotlog.txt -
[2025-10-11 20:03:48] 2025-10-12 03:03:15,619 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839163281/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:03:48] 2025-10-12 03:03:15,619 | INFO     | extracted standard info from prmon json
[2025-10-11 20:03:48] 2025-10-12 03:03:15,619 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 20:03:48] 2025-10-12 03:03:15,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:03:48] 2025-10-12 03:03:15,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:03:48] 2025-10-12 03:03:15,622 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | WARNING  | wrong length of table data, x=[1760238032.0], y=[937.0] (must be same and length>=4)
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | could have reported an average CPU frequency of 2627 MHz (4 samples)
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | ..............................
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . Timing measurements:
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . get job = 0 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . initial setup = 4 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . payload setup = 16 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . stage-in = 0 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . payload execution = 44 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . stage-out = 0 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,624 | INFO     | . log creation = 0 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,624 | INFO     | ..............................
[2025-10-11 20:03:48] 2025-10-12 03:03:15,624 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 20:03:48] 2025-10-12 03:03:15,624 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839163281/pilotlog.txt
[2025-10-11 20:03:48] 2025-10-12 03:03:15,643 | WARNING  | 
[2025-10-11 20:03:48] [begin log extracts]
[2025-10-11 20:03:48] - Log from pilotlog.txt -
[2025-10-11 20:03:48] 2025-10-12 03:03:15,619 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839163281/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:03:48] 2025-10-12 03:03:15,619 | INFO     | extracted standard info from prmon json
[2025-10-11 20:03:48] 2025-10-12 03:03:15,619 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 20:03:48] 2025-10-12 03:03:15,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:03:48] 2025-10-12 03:03:15,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:03:48] 2025-10-12 03:03:15,622 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | WARNING  | wrong length of table data, x=[1760238032.0], y=[937.0] (must be same and length>=4)
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | could have reported an average CPU frequency of 2627 MHz (4 samples)
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | ..............................
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . Timing measurements:
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . get job = 0 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . initial setup = 4 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . payload setup = 16 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . stage-in = 0 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . payload execution = 44 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,623 | INFO     | . stage-out = 0 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,624 | INFO     | . log creation = 0 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,624 | INFO     | ..............................
[2025-10-11 20:03:48] 2025-10-12 03:03:15,624 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 20:03:48] 2025-10-12 03:03:15,624 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839163281/pilotlog.txt
[2025-10-11 20:03:48] [end log extracts]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,643 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 20:03:48] 2025-10-12 03:03:15,644 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 20:03:48] 2025-10-12 03:03:15,718 | INFO     | 
[2025-10-11 20:03:48] 2025-10-12 03:03:15,718 | INFO     | job summary report
[2025-10-11 20:03:48] 2025-10-12 03:03:15,718 | INFO     | --------------------------------------------------
[2025-10-11 20:03:48] 2025-10-12 03:03:15,718 | INFO     | PanDA job id: 6839163281
[2025-10-11 20:03:48] 2025-10-12 03:03:15,718 | INFO     | task id: 46676269
[2025-10-11 20:03:48] 2025-10-12 03:03:15,718 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 20:00:55,993 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 20:03:48] 2025-10-12 03:03:15,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:03:48] 2025-10-12 03:03:15,718 | INFO     | pilot state: failed 
[2025-10-11 20:03:48] 2025-10-12 03:03:15,718 | INFO     | transexitcode: 65
[2025-10-11 20:03:48] 2025-10-12 03:03:15,718 | INFO     | exeerrorcode: 65
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | exitcode: 65
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | cpuconsumptiontime: 18 s
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | nevents: 0
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | neventsw: 0
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | pid: 2297302
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | pgrp: 2297302
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | corecount: 12
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | event service: False
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | sizes: {0: 2348029, 1: 2348882, 12: 2348882, 13: 2349172, 23: 2349228, 64: 2372458, 65: 2376910, 66: 2376910, 196: 2377076}
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | --------------------------------------------------
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | 
[2025-10-11 20:03:48] 2025-10-12 03:03:15,719 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 20:03:48] 2025-10-12 03:03:15,751 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,751 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,751 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,751 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,751 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,751 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | job 6839163281 has completed (purged errors)
[2025-10-11 20:03:48] 2025-10-12 03:03:15,752 | INFO     | overall cleanup function is called
[2025-10-11 20:03:48] 2025-10-12 03:03:16,759 | INFO     | --- collectZombieJob: --- 10, [2297302]
[2025-10-11 20:03:48] 2025-10-12 03:03:16,759 | INFO     | zombie collector waiting for pid 2297302
[2025-10-11 20:03:48] 2025-10-12 03:03:16,759 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:03:48] 2025-10-12 03:03:16,759 | INFO     | collected zombie processes
[2025-10-11 20:03:48] 2025-10-12 03:03:16,759 | INFO     | will attempt to kill all subprocesses of pid=2297302
[2025-10-11 20:03:48] 2025-10-12 03:03:17,029 | INFO     | process IDs to be killed: [2297302] (in reverse order)
[2025-10-11 20:03:48] 2025-10-12 03:03:17,137 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:03:48] 2025-10-12 03:03:17,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:03:48] 2025-10-12 03:03:17,149 | INFO     | did not find any defunct processes belonging to 2297302
[2025-10-11 20:03:48] 2025-10-12 03:03:17,161 | INFO     | did not find any defunct processes belonging to 2297302
[2025-10-11 20:03:48] 2025-10-12 03:03:17,161 | INFO     | ready for new job
[2025-10-11 20:03:48] 2025-10-12 03:03:17,161 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:03:48] 2025-10-12 03:03:17,163 | INFO     | ***************************************
[2025-10-11 20:03:48] 2025-10-12 03:03:17,163 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:03:48] 2025-10-12 03:03:17,163 | INFO     | ***************************************
[2025-10-11 20:03:48] 2025-10-12 03:03:17,163 | INFO     | 
[2025-10-11 20:03:48] 2025-10-12 03:03:17,165 | INFO     | architecture information:
[2025-10-11 20:03:48] 2025-10-12 03:03:17,165 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:03:48] 2025-10-12 03:03:17,178 | INFO     | cat /etc/os-release:
[2025-10-11 20:03:48] NAME="CentOS Linux"
[2025-10-11 20:03:48] VERSION="7 (Core)"
[2025-10-11 20:03:48] ID="centos"
[2025-10-11 20:03:48] ID_LIKE="rhel fedora"
[2025-10-11 20:03:48] VERSION_ID="7"
[2025-10-11 20:03:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:03:48] ANSI_COLOR="0;31"
[2025-10-11 20:03:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:03:48] HOME_URL="https://www.centos.org/"
[2025-10-11 20:03:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:03:48] 
[2025-10-11 20:03:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:03:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:03:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:03:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:03:48] 
[2025-10-11 20:03:48] 2025-10-12 03:03:17,179 | INFO     | ***************************************
[2025-10-11 20:03:48] 2025-10-12 03:03:17,682 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 20:03:48] 2025-10-12 03:03:17,726 | INFO     | sufficient remaining disk space (1952382451712 B)
[2025-10-11 20:03:48] 2025-10-12 03:03:17,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:03:48] 2025-10-12 03:03:17,727 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:03:48] 2025-10-12 03:03:17,727 | INFO     | update_server=False
[2025-10-11 20:03:48] 2025-10-12 03:03:17,727 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:03:48] 2025-10-12 03:03:17,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:03:48] 2025-10-12 03:03:17,739 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:03:48] 2025-10-12 03:03:17,739 | INFO     | aborting loop
[2025-10-11 20:03:48] 2025-10-12 03:03:17,751 | INFO     | all data control threads have been joined
[2025-10-11 20:03:48] 2025-10-12 03:03:17,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:03:48] 2025-10-12 03:03:17,994 | INFO     | all payload control threads have been joined
[2025-10-11 20:03:48] 2025-10-12 03:03:18,456 | INFO     | all job control threads have been joined
[2025-10-11 20:03:48] 2025-10-12 03:03:18,733 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:18,743 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:18,745 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:18,757 | INFO     | [data] control thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:18,758 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:18,839 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:03:48] 2025-10-12 03:03:19,001 | INFO     | [payload] control thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:19,459 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:19,462 | INFO     | [job] control thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:19,515 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:19,534 | INFO     | [job] validate thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:19,718 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:19,747 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:20,157 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:20,201 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:20,845 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:21,859 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:03:48] 2025-10-12 03:03:23,310 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:03:48] 2025-10-12 03:03:23,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157416298304)>', '<ExcThread(monitor, started 140156057155328)>']
[2025-10-11 20:03:48] 2025-10-12 03:03:28,567 | INFO     | all workflow threads have been joined
[2025-10-11 20:03:48] 2025-10-12 03:03:28,567 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:03:48] 2025-10-12 03:03:28,567 | INFO     | traces error code: 0
[2025-10-11 20:03:48] 2025-10-12 03:03:28,567 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:03:48] 2025-10-12 03:03:47,769 | INFO     | PID=2281894 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 20:03:48] 2025-10-12 03:03:47,769 | INFO     | .. there are 35 such processes running
[2025-10-11 20:03:48] 2025-10-12 03:03:47,770 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:03:48] 2025-10-12 03:03:47,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:03:48] 2025-10-12 03:03:47,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:03:48] 2025-10-12 03:03:47,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:03:48] 2025-10-12 03:03:47,770 | INFO     | [monitor] control thread has ended
[2025-10-11 20:03:48] 2025-10-12 03:03:47,961 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:03:48] 2025-10-12 03:03:47,971 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:03:48] 2025-10-12 03:03:47,980 [wrapper] pilotpid: 2281894
[2025-10-11 20:03:48] 2025-10-12 03:03:47,988 [wrapper] Pilot exit status: 0
[2025-10-11 20:03:48] 2025-10-12 03:03:48,120 [wrapper] pandaids: 6839163281
[2025-10-11 20:03:48] 2025-10-12 03:03:48,250 [wrapper] cleanup supervisor_pilot 2281900 2281895
[2025-10-11 20:03:48] 2025-10-12 03:03:48,266 [wrapper] Test setup, not cleaning
[2025-10-11 20:03:48] 2025-10-12 03:03:48,276 [wrapper] apfmon messages muted
[2025-10-11 20:03:48] 2025-10-12 03:03:48,287 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:03:48] 2025-10-12 03:03:48,299 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:03:48]  *** Error codes and diagnostics ***
[2025-10-11 20:03:48]     "exeErrorCode": 65,
[2025-10-11 20:03:48]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 20:03:48]     "pilotErrorCode": 1305,
[2025-10-11 20:03:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 20:03:48]  *** Listing of results directory ***
[2025-10-11 20:03:48] total 218684
[2025-10-11 20:03:48] -rw-r--r--. 1 boinc boinc    557409 Oct 11 17:05 pilot3.tar.gz
[2025-10-11 20:03:48] -rw-r--r--. 1 boinc boinc      5112 Oct 11 17:13 queuedata.json
[2025-10-11 20:03:48] -rwx------. 1 boinc boinc     36292 Oct 11 17:14 runpilot2-wrapper.sh
[2025-10-11 20:03:48] -rw-r--r--. 1 boinc boinc       100 Oct 11 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:03:48] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 19:58 run_atlas
[2025-10-11 20:03:48] -rw-r--r--. 1 boinc boinc       105 Oct 11 19:58 job.xml
[2025-10-11 20:03:48] -rw-r--r--. 1 boinc boinc      6593 Oct 11 19:58 init_data.xml
[2025-10-11 20:03:48] -rw-r--r--. 2 boinc boinc 219801294 Oct 11 19:58 EVNT.46676267._002750.pool.root.1
[2025-10-11 20:03:48] -rw-r--r--. 2 boinc boinc     15120 Oct 11 19:58 start_atlas.sh
[2025-10-11 20:03:48] drwxrwx--x. 2 boinc boinc      4096 Oct 11 19:58 shared
[2025-10-11 20:03:48] -rw-r--r--. 2 boinc boinc    569680 Oct 11 19:58 input.tar.gz
[2025-10-11 20:03:48] -rw-r--r--. 1 boinc boinc         0 Oct 11 19:58 boinc_lockfile
[2025-10-11 20:03:48] -rw-r--r--. 1 boinc boinc      2550 Oct 11 19:58 pandaJob.out
[2025-10-11 20:03:48] -rw-------. 1 boinc boinc    975496 Oct 11 19:59 agis_schedconf.cvmfs.json
[2025-10-11 20:03:48] -rw-------. 1 boinc boinc   1560580 Oct 11 19:59 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:03:48] drwx------. 5 boinc boinc      4096 Oct 11 19:59 pilot3
[2025-10-11 20:03:48] -rw-------. 1 boinc boinc       960 Oct 11 20:01 memory_monitor_summary.json
[2025-10-11 20:03:48] -rw-------. 1 boinc boinc     21789 Oct 11 20:01 log.46676269._067445.job.log.tgz.1
[2025-10-11 20:03:48] -rw-------. 1 boinc boinc      8382 Oct 11 20:03 heartbeat.json
[2025-10-11 20:03:48] -rw-r--r--. 1 boinc boinc       523 Oct 11 20:03 boinc_task_state.xml
[2025-10-11 20:03:48] -rw-------. 1 boinc boinc        95 Oct 11 20:03 pilot_heartbeat.json
[2025-10-11 20:03:48] -rw-------. 1 boinc boinc       823 Oct 11 20:03 pilotlog.txt
[2025-10-11 20:03:48] -rw-------. 1 boinc boinc     90511 Oct 11 20:03 log.46676269._067445.job.log.1
[2025-10-11 20:03:48] -rw-------. 1 boinc boinc       188 Oct 11 20:03 output.list
[2025-10-11 20:03:48] -rw-r--r--. 1 boinc boinc       620 Oct 11 20:03 runtime_log
[2025-10-11 20:03:48] -rw-------. 1 boinc boinc    133120 Oct 11 20:03 result.tar.gz
[2025-10-11 20:03:48] -rw-------. 1 boinc boinc       644 Oct 11 20:03 uSfKDmauyR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm31hNDmsPJkPn.diag
[2025-10-11 20:03:48] -rw-r--r--. 1 boinc boinc      8528 Oct 11 20:03 runtime_log.err
[2025-10-11 20:03:48] -rw-r--r--. 1 boinc boinc      8192 Oct 11 20:03 boinc_mmap_file
[2025-10-11 20:03:48] -rw-r--r--. 1 boinc boinc        22 Oct 11 20:03 wrapper_checkpoint.txt
[2025-10-11 20:03:48] -rw-r--r--. 1 boinc boinc     21800 Oct 11 20:03 stderr.txt
[2025-10-11 20:03:48] No HITS result produced
[2025-10-11 20:03:48]  *** Contents of shared directory: ***
[2025-10-11 20:03:48] total 215364
[2025-10-11 20:03:48] -rw-r--r--. 2 boinc boinc 219801294 Oct 11 19:58 ATLAS.root_0
[2025-10-11 20:03:48] -rw-r--r--. 2 boinc boinc     15120 Oct 11 19:58 start_atlas.sh
[2025-10-11 20:03:48] -rw-r--r--. 2 boinc boinc    569680 Oct 11 19:58 input.tar.gz
[2025-10-11 20:03:48] -rw-------. 1 boinc boinc    133120 Oct 11 20:03 result.tar.gz
20:03:50 (2277831): run_atlas exited; CPU time 26.417907
20:03:50 (2277831): called boinc_finish(0)

</stderr_txt>
]]>

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