Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 17:30:01 (28396): vboxwrapper version 26210
2025-10-12 17:30:01 (28396): BOINC client version: 8.0.2
2025-10-12 17:30:02 (28396): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-10-12 17:30:02 (28396): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 17:30:02 (28396): Create VM. (boinc_fead9df2a2a3e000, slot#0)
2025-10-12 17:30:03 (28396): Setting Memory Size for VM. (6000MB)
2025-10-12 17:30:03 (28396): Setting CPU Count for VM. (3)
2025-10-12 17:30:03 (28396): Setting Chipset Options for VM.
2025-10-12 17:30:04 (28396): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 17:30:04 (28396): Setting Boot Options for VM.
2025-10-12 17:30:04 (28396): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 17:30:05 (28396): Enabling VM Network Access.
2025-10-12 17:30:05 (28396): Disabling USB Support for VM.
2025-10-12 17:30:05 (28396): Disabling COM Port Support for VM.
2025-10-12 17:30:05 (28396): Disabling LPT Port Support for VM.
2025-10-12 17:30:06 (28396): Disabling Audio Support for VM.
2025-10-12 17:30:06 (28396): Disabling Clipboard Support for VM.
2025-10-12 17:30:06 (28396): Disabling Drag and Drop Support for VM.
2025-10-12 17:30:07 (28396): Adding storage controller(s) to VM.
2025-10-12 17:30:07 (28396): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 17:30:07 (28396): Adding VirtualBox Guest Additions to VM.
2025-10-12 17:30:08 (28396): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 17:30:08 (28396): forwarding host port 57166 to guest port 80
2025-10-12 17:30:08 (28396): Enabling remote desktop for VM.
2025-10-12 17:30:09 (28396): Enabling shared directory for VM.
2025-10-12 17:30:09 (28396): Starting VM using VBoxManage interface. (boinc_fead9df2a2a3e000, slot#0)
2025-10-12 17:30:15 (28396): Successfully started VM. (PID = '24912')
2025-10-12 17:30:15 (28396): Reporting VM Process ID to BOINC.
2025-10-12 17:30:15 (28396): Guest Log: BIOS: VirtualBox 7.0.6
2025-10-12 17:30:15 (28396): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 17:30:15 (28396): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 17:30:15 (28396): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 17:30:15 (28396): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 17:30:15 (28396): Detected: Web Application Enabled (http://localhost:57166)
2025-10-12 17:30:15 (28396): Detected: Remote Desktop Enabled (localhost:57167)
2025-10-12 17:30:15 (28396): Preference change detected
2025-10-12 17:30:15 (28396): Setting CPU throttle for VM. (100%)
2025-10-12 17:30:15 (28396): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 17:30:17 (28396): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 17:30:17 (28396): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 17:30:20 (28396): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 17:30:20 (28396): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 17:30:20 (28396): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 17:30:27 (28396): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 17:30:27 (28396): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 17:30:32 (28396): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 17:30:32 (28396): Guest Log: 00:00:00.000107 main     Log opened 2025-10-12T17:30:30.683030000Z
2025-10-12 17:30:32 (28396): Guest Log: 00:00:00.000196 main     OS Product: Linux
2025-10-12 17:30:32 (28396): Guest Log: 00:00:00.000224 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 17:30:32 (28396): Guest Log: 00:00:00.000243 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 17:30:32 (28396): Guest Log: 00:00:00.000289 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 17:30:32 (28396): Guest Log: 00:00:00.000290 main     Process ID: 1341
2025-10-12 17:30:32 (28396): Guest Log: 00:00:00.000290 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 17:30:32 (28396): Guest Log: 00:00:00.000901 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 17:30:33 (28396): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 17:30:33 (28396): Guest Log: [INFO] Mounting shared directory
2025-10-12 17:30:33 (28396): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 17:30:35 (28396): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 17:30:35 (28396): Guest Log: [INFO] Detected branch: prod
2025-10-12 17:30:35 (28396): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 17:30:35 (28396): Guest Log: Copying input files
2025-10-12 17:30:36 (28396): Guest Log: Copied input files into RunAtlas.
2025-10-12 17:30:36 (28396): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-10-12 17:30:42 (28396): Guest Log: 00:00:10.002663 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 372 903 000ns (GuestNow=1 760 283 042 311 821 000 ns GuestLast=1 760 290 230 684 724 000 ns fSetTimeLastLoop=true )
2025-10-12 17:30:44 (28396): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 17:30:44 (28396): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 17:30:44 (28396): Guest Log: 2.6.3.0 1615 0 29608 151625 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-10-12 17:30:45 (28396): Guest Log: copied the webapp to /var/www
2025-10-12 17:30:45 (28396): Guest Log: ATHENA_PROC_NUMBER=3
2025-10-12 17:30:45 (28396): Guest Log: ATHENA_CORE_NUMBER=3
2025-10-12 17:30:45 (28396): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 17:30:45 (28396): Guest Log:  *** Starting ATLAS job. (PandaID=6838366117 taskID=46676269) ***
2025-10-12 19:10:18 (28396): Status Report: Elapsed Time: '6000.000000'
2025-10-12 19:10:18 (28396): Status Report: CPU Time: '16715.890625'
2025-10-12 20:50:21 (28396): Status Report: Elapsed Time: '12000.000000'
2025-10-12 20:50:21 (28396): Status Report: CPU Time: '34290.843750'
2025-10-12 21:55:55 (28396): Guest Log:  *** Job finished ***
2025-10-12 21:55:55 (28396): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 21:55:55 (28396): Guest Log: 2025-10-12 19:54:56,384 | INFO     | [job] control thread has finished
2025-10-12 21:55:55 (28396): Guest Log: 2025-10-12 19:54:58,007 | INFO     | [data] queue_monitor thread has finished
2025-10-12 21:55:55 (28396): Guest Log: 2025-10-12 19:55:43,075 | INFO     | [monitor] cgroup control has ended
2025-10-12 21:55:55 (28396): Guest Log: 2025-10-12 19:55:43,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140136313767744)>', '<ExcThread(monitor, started 140135505057536)>']
2025-10-12 21:55:55 (28396): Guest Log: 2025-10-12 19:55:43,602 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 21:55:55 (28396): Guest Log: 2025-10-12 19:55:43,602 | INFO     | [monitor] control thread has ended
2025-10-12 21:55:55 (28396): Guest Log: 2025-10-12 19:55:48,086 | INFO     | all workflow threads have been joined
2025-10-12 21:55:56 (28396): Guest Log: 2025-10-12 19:55:48,086 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 21:55:56 (28396): Guest Log: 2025-10-12 19:55:48,086 | INFO     | traces error code: 0
2025-10-12 21:55:56 (28396): Guest Log: 2025-10-12 19:55:48,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 21:55:56 (28396): Guest Log: 2025-10-12 19:55:48,203 [wrapper] ==== pilot stdout END ====
2025-10-12 21:55:56 (28396): Guest Log: 2025-10-12 19:55:48,206 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 21:55:56 (28396): Guest Log: 2025-10-12 19:55:48,210 [wrapper] pilotpid: 5984
2025-10-12 21:55:56 (28396): Guest Log: 2025-10-12 19:55:48,213 [wrapper] Pilot exit status: 0
2025-10-12 21:55:56 (28396): Guest Log: 2025-10-12 19:55:48,255 [wrapper] pandaids: 6838366117
2025-10-12 21:55:56 (28396): Guest Log: 2025-10-12 19:55:48,284 [wrapper] cleanup supervisor_pilot 15431 5985
2025-10-12 21:55:56 (28396): Guest Log: 2025-10-12 19:55:48,288 [wrapper] Test setup, not cleaning
2025-10-12 21:55:56 (28396): Guest Log: 2025-10-12 19:55:48,293 [wrapper] apfmon messages muted
2025-10-12 21:55:56 (28396): Guest Log: 2025-10-12 19:55:48,296 [wrapper] ==== wrapper stdout END ====
2025-10-12 21:55:56 (28396): Guest Log: 2025-10-12 19:55:48,300 [wrapper] ==== wrapper stderr END ====
2025-10-12 21:55:56 (28396): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 21:55:56 (28396): Guest Log:     "exeErrorCode": 0,
2025-10-12 21:55:56 (28396): Guest Log:     "exeErrorDiag": "",
2025-10-12 21:55:56 (28396): Guest Log:     "pilotErrorCode": 0,
2025-10-12 21:55:56 (28396): Guest Log:     "pilotErrorDiag": "",
2025-10-12 21:55:56 (28396): Guest Log:  *** Listing of results directory ***
2025-10-12 21:55:56 (28396): Guest Log: total 206632
2025-10-12 21:55:56 (28396): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 11:21 pilot3.tar.gz
2025-10-12 21:55:56 (28396): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 11:41 queuedata.json
2025-10-12 21:55:56 (28396): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 11:43 runpilot2-wrapper.sh
2025-10-12 21:55:56 (28396): Guest Log: -rwxr-xr-x. 1 atlas atlas      9081 Oct 12 15:30 init_data.xml
2025-10-12 21:55:56 (28396): Guest Log: -rwxr-xr-x. 1 atlas atlas    569680 Oct 12 15:30 input.tar.gz
2025-10-12 21:55:56 (28396): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 15:30 start_atlas.sh
2025-10-12 21:55:56 (28396): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 15:30 EVNT.46676267._002290.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 21:55:56 (28396): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Oct 12 15:30 pandaJob.out
2025-10-12 21:55:56 (28396): Guest Log: -rw-------. 1 atlas atlas    975528 Oct 12 15:31 agis_schedconf.cvmfs.json
2025-10-12 21:55:56 (28396): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 15:31 pilot3
2025-10-12 21:55:56 (28396): Guest Log: -rw-------. 1 atlas atlas 202843266 Oct 12 19:54 HITS.46676269._057035.pool.root.1
2025-10-12 21:55:56 (28396): Guest Log: -rw-------. 1 atlas atlas      1029 Oct 12 19:54 memory_monitor_summary.json
2025-10-12 21:55:56 (28396): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 19:54 pilot_heartbeat.json
2025-10-12 21:55:56 (28396): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 19:54 agis_ddmendpoints.agis.ALL.json
2025-10-12 21:55:56 (28396): Guest Log: -rw-------. 1 atlas atlas    384613 Oct 12 19:54 log.46676269._057035.job.log.tgz.1
2025-10-12 21:55:56 (28396): Guest Log: -rw-------. 1 atlas atlas      7829 Oct 12 19:54 heartbeat.json
2025-10-12 21:55:56 (28396): Guest Log: -rw-------. 1 atlas atlas      4798 Oct 12 19:55 pilotlog.txt
2025-10-12 21:55:56 (28396): Guest Log: -rw-------. 1 atlas atlas   2070251 Oct 12 19:55 log.46676269._057035.job.log.1
2025-10-12 21:55:56 (28396): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 19:55 output.list
2025-10-12 21:55:56 (28396): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 19:55 runtime_log
2025-10-12 21:55:56 (28396): Guest Log: -rw-------. 1 atlas atlas   2478080 Oct 12 19:55 result.tar.gz
2025-10-12 21:55:56 (28396): Guest Log: -rw-r--r--. 1 atlas atlas      8640 Oct 12 19:55 runtime_log.err
2025-10-12 21:55:56 (28396): Guest Log: -rw-------. 1 atlas atlas       657 Oct 12 19:55 47CLDmFBnR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvLgNDmO2OjDn.diag
2025-10-12 21:55:56 (28396): Guest Log: Looking for outputfile HITS.46676269._057035.pool.root.1
2025-10-12 21:55:56 (28396): Guest Log: HITS file was successfully produced
2025-10-12 21:55:56 (28396): Guest Log: -rw-------. 1 atlas atlas 202843266 Oct 12 19:54 /home/atlas/RunAtlas/HITS.46676269._057035.pool.root.1
2025-10-12 21:55:56 (28396): Guest Log: Successfully finished the ATLAS job!
2025-10-12 21:55:56 (28396): Guest Log: Copying the results back to the shared directory!
2025-10-12 21:55:56 (28396): Guest Log:  *** Contents of shared directory: ***
2025-10-12 21:55:56 (28396): Guest Log: total 417424
2025-10-12 21:55:56 (28396): Guest Log: -rwxrwxrwx. 1 root root 221513980 Oct 12 15:30 ATLAS.root_0
2025-10-12 21:55:56 (28396): Guest Log: -rwxrwxrwx. 1 root root 202843266 Oct 12  2025 HITS.pool.root.1
2025-10-12 21:55:56 (28396): Guest Log: -rwxrwxrwx. 1 root root      9081 Oct 12 15:30 init_data.xml
2025-10-12 21:55:56 (28396): Guest Log: -rwxrwxrwx. 1 root root    569680 Oct 12 02:45 input.tar.gz
2025-10-12 21:55:56 (28396): Guest Log: -rwxrwxrwx. 1 root root   2478080 Oct 12  2025 result.tar.gz
2025-10-12 21:55:56 (28396): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 02:45 start_atlas.sh
2025-10-12 21:55:56 (28396): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 21:55:56 (28396): VM Completion File Detected.
2025-10-12 21:55:56 (28396): Powering off VM.
2025-10-12 21:55:57 (28396): Successfully stopped VM.
2025-10-12 21:55:57 (28396): Deregistering VM. (boinc_fead9df2a2a3e000, slot#0)
2025-10-12 21:55:57 (28396): Removing network bandwidth throttle group from VM.
2025-10-12 21:55:57 (28396): Removing VM from VirtualBox.
2025-10-12 21:56:03 (28396): called boinc_finish(0)

</stderr_txt>
]]>

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