Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:54 (3529813): wrapper (7.7.26015): starting
00:01:54 (3529813): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:01:54] Arguments: --nthreads 12
[2025-10-12 00:01:54] Threads: 12
[2025-10-12 00:01:54] Checking for CVMFS
[2025-10-12 00:01:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:01:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:01:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:02:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:02:01] 2.13.2.0 3526814 59923 380060 151606 1 354 32688536 32935936 36372 16776704 0 100889907 99.550 107151259 8103 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:02:01] CVMFS is ok
[2025-10-12 00:02:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:02:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:02:01] Further information can be found at the LHC@home message board.
[2025-10-12 00:02:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:02:01] Checking for apptainer binary...
[2025-10-12 00:02:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:02:01] Running /usr/bin/apptainer --version
[2025-10-12 00:02:01] apptainer version 1.4.3-1.el9
[2025-10-12 00:02:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:02:03] c6-12-25-2.aglt2.org
[2025-10-12 00:02:03] apptainer works
[2025-10-12 00:02:04] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:02:04] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:02:04] Starting ATLAS job with PandaID=6838988971
[2025-10-12 00:02:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:34:36]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:34:36] 2025-10-12 23:33:36,012 | INFO     | time since job start (70179s) is within the limit (172800.0s)
[2025-10-12 19:34:36] 2025-10-12 23:33:36,979 | INFO     | monitor loop #1894: job 0:6838988971 is in state 'finished'
[2025-10-12 19:34:36] 2025-10-12 23:33:36,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:34:36] 2025-10-12 23:33:38,023 | INFO     | time since job start (70181s) is within the limit (172800.0s)
[2025-10-12 19:34:36] 2025-10-12 23:33:39,507 | INFO     | monitor loop #1895: job 0:6838988971 is in state 'finished'
[2025-10-12 19:34:36] 2025-10-12 23:33:39,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:34:36] 2025-10-12 23:33:40,052 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 19:34:36] 2025-10-12 23:33:40,317 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 999.9994375000001
[2025-10-12 19:34:36] 2025-10-12 23:33:40,740 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838988971/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:34:36] 2025-10-12 23:33:40,741 | INFO     | extracted standard info from prmon json
[2025-10-12 19:34:36] 2025-10-12 23:33:40,742 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:34:36] 2025-10-12 23:33:40,742 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:34:36] 2025-10-12 23:33:40,747 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:34:36] 2025-10-12 23:33:40,747 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:34:36] 2025-10-12 23:33:41,037 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:34:36] 2025-10-12 23:33:41,061 | INFO     | sum of square deviations: 466680820340.9837
[2025-10-12 19:34:36] 2025-10-12 23:33:41,823 | INFO     | sum of deviations: 3305731138868.657
[2025-10-12 19:34:36] 2025-10-12 23:33:41,835 | INFO     | mean x: 1760277005.6492147
[2025-10-12 19:34:36] 2025-10-12 23:33:41,835 | INFO     | mean y: 2221908.84991274
[2025-10-12 19:34:36] 2025-10-12 23:33:41,836 | INFO     | -- intersect: -12466691011.88549
[2025-10-12 19:34:36] 2025-10-12 23:33:41,836 | INFO     | intersect: -12466691011.88549
[2025-10-12 19:34:36] 2025-10-12 23:33:41,850 | INFO     | chi2: 20.15784353432904
[2025-10-12 19:34:36] 2025-10-12 23:33:41,868 | INFO     | sum of square deviations: 460599205278.1596
[2025-10-12 19:34:36] 2025-10-12 23:33:42,166 | INFO     | monitor loop #1896: job 0:6838988971 is in state 'finished'
[2025-10-12 19:34:36] 2025-10-12 23:33:42,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:34:36] 2025-10-12 23:33:42,686 | INFO     | sum of deviations: 3575527472745.0864
[2025-10-12 19:34:36] 2025-10-12 23:33:42,687 | INFO     | mean x: 1760276853.1533742
[2025-10-12 19:34:36] 2025-10-12 23:33:42,687 | INFO     | mean y: 2228668.0052585453
[2025-10-12 19:34:36] 2025-10-12 23:33:42,687 | INFO     | -- intersect: -13662402481.94692
[2025-10-12 19:34:36] 2025-10-12 23:33:42,688 | INFO     | intersect: -13662402481.94692
[2025-10-12 19:34:36] 2025-10-12 23:33:42,726 | INFO     | chi2: 17.035647557837645
[2025-10-12 19:34:36] 2025-10-12 23:33:42,727 | INFO     | current chi2=17.035647557837645 (change=15.48874000918927 %)
[2025-10-12 19:34:36] 2025-10-12 23:33:42,727 | INFO     | right removable region: 1140
[2025-10-12 19:34:36] 2025-10-12 23:33:42,748 | INFO     | sum of square deviations: 460598611627.46576
[2025-10-12 19:34:36] 2025-10-12 23:33:43,038 | INFO     | sum of deviations: 2960811083830.729
[2025-10-12 19:34:36] 2025-10-12 23:33:43,039 | INFO     | mean x: 1760277158.1524978
[2025-10-12 19:34:36] 2025-10-12 23:33:43,039 | INFO     | mean y: 2230555.5302366344
[2025-10-12 19:34:36] 2025-10-12 23:33:43,040 | INFO     | -- intersect: -11313149015.538334
[2025-10-12 19:34:36] 2025-10-12 23:33:43,040 | INFO     | intersect: -11313149015.538334
[2025-10-12 19:34:36] 2025-10-12 23:33:43,044 | INFO     | chi2: 16.05872666143365
[2025-10-12 19:34:36] 2025-10-12 23:33:43,044 | INFO     | current chi2=16.05872666143365 (change=20.335096191785333 %)
[2025-10-12 19:34:36] 2025-10-12 23:33:43,045 | INFO     | left removable region: 10
[2025-10-12 19:34:36] 2025-10-12 23:33:43,048 | INFO     | sum of square deviations: 447404890477.5078
[2025-10-12 19:34:36] 2025-10-12 23:33:43,280 | INFO     | sum of deviations: 2953043314866.0005
[2025-10-12 19:34:36] 2025-10-12 23:33:43,280 | INFO     | mean x: 1760277127.660177
[2025-10-12 19:34:36] 2025-10-12 23:33:43,281 | INFO     | mean y: 2244319.0911504426
[2025-10-12 19:34:36] 2025-10-12 23:33:43,281 | INFO     | -- intersect: -11616257657.050608
[2025-10-12 19:34:36] 2025-10-12 23:33:43,281 | INFO     | intersect: -11616257657.050608
[2025-10-12 19:34:36] 2025-10-12 23:33:43,285 | INFO     | chi2: 10.467044246813506
[2025-10-12 19:34:36] 2025-10-12 23:33:43,286 | INFO     | -- intersect: -11616257657.050608
[2025-10-12 19:34:36] 2025-10-12 23:33:43,286 | INFO     | current memory leak: 6.60 B/s (using 1130 data points, chi2=10.47)
[2025-10-12 19:34:36] 2025-10-12 23:33:43,290 | INFO     | could have reported an average CPU frequency of 999 MHz (41 samples)
[2025-10-12 19:34:36] 2025-10-12 23:33:43,291 | INFO     | ..............................
[2025-10-12 19:34:36] 2025-10-12 23:33:43,291 | INFO     | . Timing measurements:
[2025-10-12 19:34:36] 2025-10-12 23:33:43,291 | INFO     | . get job = 0 s
[2025-10-12 19:34:36] 2025-10-12 23:33:43,291 | INFO     | . initial setup = 12 s
[2025-10-12 19:34:36] 2025-10-12 23:33:43,291 | INFO     | . payload setup = 68 s
[2025-10-12 19:34:36] 2025-10-12 23:33:43,292 | INFO     | . stage-in = 0 s
[2025-10-12 19:34:36] 2025-10-12 23:33:43,292 | INFO     | . payload execution = 69912 s
[2025-10-12 19:34:36] 2025-10-12 23:33:43,292 | INFO     | . stage-out = 15 s
[2025-10-12 19:34:36] 2025-10-12 23:33:43,292 | INFO     | . log creation = 1 s
[2025-10-12 19:34:36] 2025-10-12 23:33:43,293 | INFO     | ..............................
[2025-10-12 19:34:36] 2025-10-12 23:33:44,590 | INFO     | 
[2025-10-12 19:34:36] 2025-10-12 23:33:44,591 | INFO     | job summary report
[2025-10-12 19:34:36] 2025-10-12 23:33:44,591 | INFO     | --------------------------------------------------
[2025-10-12 19:34:36] 2025-10-12 23:33:44,591 | INFO     | PanDA job id: 6838988971
[2025-10-12 19:34:36] 2025-10-12 23:33:44,592 | INFO     | task id: 46676269
[2025-10-12 19:34:36] 2025-10-12 23:33:44,592 | INFO     | errors: (none)
[2025-10-12 19:34:36] 2025-10-12 23:33:44,592 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:34:36] 2025-10-12 23:33:44,592 | INFO     | pilot state: finished 
[2025-10-12 19:34:36] 2025-10-12 23:33:44,593 | INFO     | transexitcode: 0
[2025-10-12 19:34:36] 2025-10-12 23:33:44,593 | INFO     | exeerrorcode: 0
[2025-10-12 19:34:36] 2025-10-12 23:33:44,593 | INFO     | exeerrordiag: 
[2025-10-12 19:34:36] 2025-10-12 23:33:44,593 | INFO     | exitcode: 0
[2025-10-12 19:34:36] 2025-10-12 23:33:44,594 | INFO     | exitmsg: OK
[2025-10-12 19:34:36] 2025-10-12 23:33:44,594 | INFO     | cpuconsumptiontime: 117752 s
[2025-10-12 19:34:36] 2025-10-12 23:33:44,594 | INFO     | nevents: 400
[2025-10-12 19:34:36] 2025-10-12 23:33:44,594 | INFO     | neventsw: 0
[2025-10-12 19:34:36] 2025-10-12 23:33:44,595 | INFO     | pid: 3567325
[2025-10-12 19:34:36] 2025-10-12 23:33:44,595 | INFO     | pgrp: 3567325
[2025-10-12 19:34:36] 2025-10-12 23:33:44,595 | INFO     | corecount: 12
[2025-10-12 19:34:36] 2025-10-12 23:33:44,595 | INFO     | event service: False
[2025-10-12 19:34:36] 2025-10-12 23:33:44,595 | INFO     | sizes: {0: 2348027, 2: 2348628, 4: 2348712, 5: 2348740, 6: 2348967, 7: 2349151, 19: 2349151, 31: 2349179, 43: 2349207, 54: 2349497, 55: 2349525, 66: 2349833, 69988
[2025-10-12 19:34:36] 2025-10-12 23:33:44,596 | INFO     | --------------------------------------------------
[2025-10-12 19:34:36] 2025-10-12 23:33:44,596 | INFO     | 
[2025-10-12 19:34:36] 2025-10-12 23:33:44,596 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 19:34:36] 2025-10-12 23:33:44,944 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,945 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,946 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,946 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,946 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,947 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,973 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,973 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,974 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:34:36] 2025-10-12 23:33:44,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,974 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:34:36] 2025-10-12 23:33:44,974 | INFO     | job 6838988971 has completed (purged errors)
[2025-10-12 19:34:36] 2025-10-12 23:33:44,975 | INFO     | overall cleanup function is called
[2025-10-12 19:34:36] 2025-10-12 23:33:46,183 | INFO     | --- collectZombieJob: --- 10, [3567325]
[2025-10-12 19:34:36] 2025-10-12 23:33:46,184 | INFO     | zombie collector waiting for pid 3567325
[2025-10-12 19:34:36] 2025-10-12 23:33:46,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:34:36] 2025-10-12 23:33:46,184 | INFO     | collected zombie processes
[2025-10-12 19:34:36] 2025-10-12 23:33:46,185 | INFO     | will attempt to kill all subprocesses of pid=3567325
[2025-10-12 19:34:36] 2025-10-12 23:33:46,224 | INFO     | PID=3539778 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:34:36] 2025-10-12 23:33:46,229 | INFO     | .. there are 37 such processes running
[2025-10-12 19:34:36] 2025-10-12 23:33:51,009 [wrapper] supervise_pilot (15 min periods counter: 79)
[2025-10-12 19:34:36] 2025-10-12 23:33:51,985 | INFO     | process IDs to be killed: [3567325] (in reverse order)
[2025-10-12 19:34:36] 2025-10-12 23:33:52,704 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:34:36] 2025-10-12 23:33:52,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:34:36] 2025-10-12 23:33:52,790 | INFO     | did not find any defunct processes belonging to 3567325
[2025-10-12 19:34:36] 2025-10-12 23:33:52,864 | INFO     | did not find any defunct processes belonging to 3567325
[2025-10-12 19:34:36] 2025-10-12 23:33:52,865 | INFO     | ready for new job
[2025-10-12 19:34:36] 2025-10-12 23:33:52,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:34:36] 2025-10-12 23:33:52,873 | INFO     | ***************************************
[2025-10-12 19:34:36] 2025-10-12 23:33:52,873 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:34:36] 2025-10-12 23:33:52,873 | INFO     | ***************************************
[2025-10-12 19:34:36] 2025-10-12 23:33:52,873 | INFO     | 
[2025-10-12 19:34:36] 2025-10-12 23:33:52,888 | INFO     | architecture information:
[2025-10-12 19:34:36] 2025-10-12 23:33:52,889 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:34:36] 2025-10-12 23:33:53,084 | INFO     | cat /etc/os-release:
[2025-10-12 19:34:36] NAME="CentOS Linux"
[2025-10-12 19:34:36] VERSION="7 (Core)"
[2025-10-12 19:34:36] ID="centos"
[2025-10-12 19:34:36] ID_LIKE="rhel fedora"
[2025-10-12 19:34:36] VERSION_ID="7"
[2025-10-12 19:34:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:34:36] ANSI_COLOR="0;31"
[2025-10-12 19:34:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:34:36] HOME_URL="https://www.centos.org/"
[2025-10-12 19:34:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:34:36] 
[2025-10-12 19:34:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:34:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:34:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:34:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:34:36] 
[2025-10-12 19:34:36] 2025-10-12 23:33:53,085 | INFO     | ***************************************
[2025-10-12 19:34:36] 2025-10-12 23:33:53,591 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 19:34:36] 2025-10-12 23:33:53,696 | INFO     | sufficient remaining disk space (94126473216 B)
[2025-10-12 19:34:36] 2025-10-12 23:33:53,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:34:36] 2025-10-12 23:33:53,697 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:34:36] 2025-10-12 23:33:53,698 | INFO     | update_server=False
[2025-10-12 19:34:36] 2025-10-12 23:33:53,698 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:34:36] 2025-10-12 23:33:53,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:34:36] 2025-10-12 23:33:53,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:34:36] 2025-10-12 23:33:53,703 | INFO     | aborting loop
[2025-10-12 19:34:36] 2025-10-12 23:33:53,742 | INFO     | all job control threads have been joined
[2025-10-12 19:34:36] 2025-10-12 23:33:54,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:34:36] 2025-10-12 23:33:54,324 | INFO     | all data control threads have been joined
[2025-10-12 19:34:36] 2025-10-12 23:33:54,705 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:54,708 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:54,714 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:54,748 | INFO     | [job] control thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:54,836 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:55,050 | INFO     | all payload control threads have been joined
[2025-10-12 19:34:36] 2025-10-12 23:33:55,330 | INFO     | [data] control thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:55,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:34:36] 2025-10-12 23:33:55,737 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:55,745 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:55,759 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:55,760 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:55,931 | INFO     | [job] validate thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:55,943 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:56,057 | INFO     | [payload] control thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:56,214 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:56,343 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:33:59,618 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:34:36] 2025-10-12 23:34:26,013 | INFO     | PID=3539778 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:34:36] 2025-10-12 23:34:26,014 | INFO     | .. there are 37 such processes running
[2025-10-12 19:34:36] 2025-10-12 23:34:26,035 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:34:36] 2025-10-12 23:34:26,035 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:34:36] 2025-10-12 23:34:26,035 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:34:36] 2025-10-12 23:34:26,841 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:34:36] 2025-10-12 23:34:27,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140605729584960)>', '<ExcThread(monitor, started 140604906383104)>']
[2025-10-12 19:34:36] 2025-10-12 23:34:28,047 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:34:36] 2025-10-12 23:34:28,048 | INFO     | [monitor] control thread has ended
[2025-10-12 19:34:36] 2025-10-12 23:34:32,570 | INFO     | all workflow threads have been joined
[2025-10-12 19:34:36] 2025-10-12 23:34:32,571 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:34:36] 2025-10-12 23:34:32,572 | INFO     | traces error code: 0
[2025-10-12 19:34:36] 2025-10-12 23:34:32,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:34:36] 2025-10-12 23:34:34,598 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:34:36] 2025-10-12 23:34:34,637 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:34:36] 2025-10-12 23:34:34,669 [wrapper] pilotpid: 3539778
[2025-10-12 19:34:36] 2025-10-12 23:34:34,703 [wrapper] Pilot exit status: 0
[2025-10-12 19:34:36] 2025-10-12 23:34:34,914 [wrapper] pandaids: 6838988971
[2025-10-12 19:34:36] 2025-10-12 23:34:36,127 [wrapper] cleanup supervisor_pilot 2341764 3539779
[2025-10-12 19:34:36] 2025-10-12 23:34:36,187 [wrapper] Test setup, not cleaning
[2025-10-12 19:34:36] 2025-10-12 23:34:36,200 [wrapper] apfmon messages muted
[2025-10-12 19:34:36] 2025-10-12 23:34:36,207 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:34:36] 2025-10-12 23:34:36,237 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:34:36]  *** Error codes and diagnostics ***
[2025-10-12 19:34:36]     "exeErrorCode": 0,
[2025-10-12 19:34:36]     "exeErrorDiag": "",
[2025-10-12 19:34:36]     "pilotErrorCode": 0,
[2025-10-12 19:34:36]     "pilotErrorDiag": "",
[2025-10-12 19:34:36]  *** Listing of results directory ***
[2025-10-12 19:34:36] total 419068
[2025-10-12 19:34:36] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 17:13 pilot3.tar.gz
[2025-10-12 19:34:36] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 17:22 queuedata.json
[2025-10-12 19:34:36] -rwx------. 1 boincer umatlas     36292 Oct 11 17:23 runpilot2-wrapper.sh
[2025-10-12 19:34:36] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:34:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:01 run_atlas
[2025-10-12 19:34:36] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:01 job.xml
[2025-10-12 19:34:36] -rw-r--r--. 2 boincer umatlas 222766560 Oct 12 00:01 EVNT.46676267._002622.pool.root.1
[2025-10-12 19:34:36] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 00:01 input.tar.gz
[2025-10-12 19:34:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 19:34:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:01 shared
[2025-10-12 19:34:36] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:01 boinc_lockfile
[2025-10-12 19:34:36] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 00:02 pandaJob.out
[2025-10-12 19:34:36] -rw-------. 1 boincer umatlas    975512 Oct 12 00:03 agis_schedconf.cvmfs.json
[2025-10-12 19:34:36] drwx------. 5 boincer umatlas      4096 Oct 12 00:03 pilot3
[2025-10-12 19:34:36] -rw-------. 1 boincer umatlas 190286170 Oct 12 19:28 HITS.46676269._065286.pool.root.1
[2025-10-12 19:34:36] -rw-r--r--. 1 boincer umatlas       532 Oct 12 19:29 boinc_task_state.xml
[2025-10-12 19:34:36] -rw-r--r--. 1 boincer umatlas      6860 Oct 12 19:30 init_data.xml
[2025-10-12 19:34:36] -rw-------. 1 boincer umatlas      1046 Oct 12 19:32 memory_monitor_summary.json
[2025-10-12 19:34:36] -rw-------. 1 boincer umatlas   1560580 Oct 12 19:32 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:34:36] -rw-------. 1 boincer umatlas    954093 Oct 12 19:32 log.46676269._065286.job.log.tgz.1
[2025-10-12 19:34:36] -rw-------. 1 boincer umatlas      7847 Oct 12 19:33 heartbeat.json
[2025-10-12 19:34:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 19:34 boinc_mmap_file
[2025-10-12 19:34:36] -rw-r--r--. 1 boincer umatlas        29 Oct 12 19:34 wrapper_checkpoint.txt
[2025-10-12 19:34:36] -rw-------. 1 boincer umatlas        96 Oct 12 19:34 pilot_heartbeat.json
[2025-10-12 19:34:36] -rw-------. 1 boincer umatlas      4824 Oct 12 19:34 pilotlog.txt
[2025-10-12 19:34:36] -rw-------. 1 boincer umatlas   5128279 Oct 12 19:34 log.46676269._065286.job.log.1
[2025-10-12 19:34:36] -rw-------. 1 boincer umatlas       357 Oct 12 19:34 output.list
[2025-10-12 19:34:36] -rw-r--r--. 1 boincer umatlas       620 Oct 12 19:34 runtime_log
[2025-10-12 19:34:36] -rw-------. 1 boincer umatlas   6103040 Oct 12 19:34 result.tar.gz
[2025-10-12 19:34:36] -rw-r--r--. 1 boincer umatlas      8716 Oct 12 19:34 runtime_log.err
[2025-10-12 19:34:36] -rw-------. 1 boincer umatlas       662 Oct 12 19:34 PLjKDmhEwR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmEdSMDmEXGiwm.diag
[2025-10-12 19:34:36] -rw-r--r--. 1 boincer umatlas     21571 Oct 12 19:34 stderr.txt
[2025-10-12 19:34:37] HITS file was successfully produced:
[2025-10-12 19:34:37] -rw-------. 1 boincer umatlas 190286170 Oct 12 19:28 shared/HITS.pool.root.1
[2025-10-12 19:34:37]  *** Contents of shared directory: ***
[2025-10-12 19:34:37] total 409920
[2025-10-12 19:34:37] -rw-r--r--. 2 boincer umatlas 222766560 Oct 12 00:01 ATLAS.root_0
[2025-10-12 19:34:37] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 00:01 input.tar.gz
[2025-10-12 19:34:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:01 start_atlas.sh
[2025-10-12 19:34:37] -rw-------. 1 boincer umatlas 190286170 Oct 12 19:28 HITS.pool.root.1
[2025-10-12 19:34:37] -rw-------. 1 boincer umatlas   6103040 Oct 12 19:34 result.tar.gz
19:34:38 (3529813): run_atlas exited; CPU time 123259.584692
19:34:38 (3529813): called boinc_finish(0)

</stderr_txt>
]]>

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