Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:44:15 (3003256): wrapper (7.7.26015): starting
19:44:15 (3003256): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 19:44:15] Arguments: --nthreads 12
[2025-10-11 19:44:15] Threads: 12
[2025-10-11 19:44:15] Checking for CVMFS
[2025-10-11 19:44:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:44:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:44:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:44:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:44:17] 2.11.5.0 2605 30873 215864 151604 1 693 45181122 45568000 21256 130560 0 298172503 99.868 118796854 28176 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 19:44:17] CVMFS is ok
[2025-10-11 19:44:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:44:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:44:17] Further information can be found at the LHC@home message board.
[2025-10-11 19:44:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:44:17] Checking for apptainer binary...
[2025-10-11 19:44:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:44:17] Running /usr/bin/apptainer --version
[2025-10-11 19:44:17] apptainer version 1.4.1-1.el9
[2025-10-11 19:44:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:44:17] wns0089.triumf.lcg
[2025-10-11 19:44:17] apptainer works
[2025-10-11 19:44:17] Set ATHENA_PROC_NUMBER=12
[2025-10-11 19:44:17] Set ATHENA_CORE_NUMBER=12
[2025-10-11 19:44:17] Starting ATLAS job with PandaID=6839163195
[2025-10-11 19:44:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:49:59]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | ..............................
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . Timing measurements:
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . get job = 0 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . initial setup = 4 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . payload setup = 22 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . stage-in = 0 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . payload execution = 46 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . stage-out = 0 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . log creation = 0 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | ..............................
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839163195/pilotlog.txt
[2025-10-11 19:49:59] 2025-10-12 02:49:01,614 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 19:49:59] - Log from pilotlog.txt -
[2025-10-11 19:49:59] 2025-10-12 02:49:01,458 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839163195/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 19:49:59] 2025-10-12 02:49:01,459 | INFO     | extracted standard info from prmon json
[2025-10-11 19:49:59] 2025-10-12 02:49:01,459 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:49:59] 2025-10-12 02:49:01,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:49:59] 2025-10-12 02:49:01,482 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:49:59] 2025-10-12 02:49:01,483 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:49:59] 2025-10-12 02:49:01,483 | WARNING  | wrong length of table data, x=[1760237171.0], y=[1266.0] (must be same and length>=4)
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | could have reported an average CPU frequency of 2693 MHz (4 samples)
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | ..............................
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . Timing measurements:
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . get job = 0 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . initial setup = 4 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . payload setup = 22 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . stage-in = 0 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . payload execution = 46 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . stage-out = 0 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . log creation = 0 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | ..............................
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839163195/pilotlog.txt
[2025-10-11 19:49:59] 2025-10-12 02:49:01,615 | WARNING  | 
[2025-10-11 19:49:59] [begin log extracts]
[2025-10-11 19:49:59] - Log from pilotlog.txt -
[2025-10-11 19:49:59] 2025-10-12 02:49:01,458 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839163195/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 19:49:59] 2025-10-12 02:49:01,459 | INFO     | extracted standard info from prmon json
[2025-10-11 19:49:59] 2025-10-12 02:49:01,459 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:49:59] 2025-10-12 02:49:01,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:49:59] 2025-10-12 02:49:01,482 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:49:59] 2025-10-12 02:49:01,483 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:49:59] 2025-10-12 02:49:01,483 | WARNING  | wrong length of table data, x=[1760237171.0], y=[1266.0] (must be same and length>=4)
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | could have reported an average CPU frequency of 2693 MHz (4 samples)
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | ..............................
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . Timing measurements:
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . get job = 0 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . initial setup = 4 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . payload setup = 22 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . stage-in = 0 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . payload execution = 46 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . stage-out = 0 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | . log creation = 0 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | ..............................
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 19:49:59] 2025-10-12 02:49:01,484 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839163195/pilotlog.txt
[2025-10-11 19:49:59] [end log extracts]
[2025-10-11 19:49:59] 2025-10-12 02:49:01,615 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 19:49:59] 2025-10-12 02:49:01,616 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 19:49:59] 2025-10-12 02:49:01,913 | INFO     | time since job start (250s) is within the limit (172800.0s)
[2025-10-11 19:49:59] 2025-10-12 02:49:01,913 | INFO     | 255s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 19:49:59] 2025-10-12 02:49:01,976 | INFO     | 
[2025-10-11 19:49:59] 2025-10-12 02:49:01,976 | INFO     | job summary report
[2025-10-11 19:49:59] 2025-10-12 02:49:01,976 | INFO     | --------------------------------------------------
[2025-10-11 19:49:59] 2025-10-12 02:49:01,976 | INFO     | PanDA job id: 6839163195
[2025-10-11 19:49:59] 2025-10-12 02:49:01,976 | INFO     | task id: 46676269
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 19:46:30,992 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | pilot state: failed 
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | transexitcode: 65
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | exeerrorcode: 65
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | exitcode: 65
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | cpuconsumptiontime: 17 s
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | nevents: 0
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | neventsw: 0
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | pid: 3020924
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | pgrp: 3020924
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | corecount: 12
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | event service: False
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | sizes: {0: 2348853, 11: 2348853, 14: 2349143, 22: 2349171, 73: 2372561, 74: 2376853, 75: 2377009, 215: 2377175}
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | --------------------------------------------------
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | 
[2025-10-11 19:49:59] 2025-10-12 02:49:01,977 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 19:49:59] 2025-10-12 02:49:02,073 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,075 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:49:59] 2025-10-12 02:49:02,075 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,075 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:49:59] 2025-10-12 02:49:02,075 | INFO     | job 6839163195 has completed (purged errors)
[2025-10-11 19:49:59] 2025-10-12 02:49:02,075 | INFO     | overall cleanup function is called
[2025-10-11 19:49:59] 2025-10-12 02:49:03,081 | INFO     | --- collectZombieJob: --- 10, [3020924]
[2025-10-11 19:49:59] 2025-10-12 02:49:03,081 | INFO     | zombie collector waiting for pid 3020924
[2025-10-11 19:49:59] 2025-10-12 02:49:03,081 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:49:59] 2025-10-12 02:49:03,081 | INFO     | collected zombie processes
[2025-10-11 19:49:59] 2025-10-12 02:49:03,081 | INFO     | will attempt to kill all subprocesses of pid=3020924
[2025-10-11 19:49:59] 2025-10-12 02:49:04,202 | INFO     | PID=3011012 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 19:49:59] 2025-10-12 02:49:04,202 | INFO     | .. there are 42 such processes running
[2025-10-11 19:49:59] 2025-10-12 02:49:04,243 | INFO     | process IDs to be killed: [3020924] (in reverse order)
[2025-10-11 19:49:59] 2025-10-12 02:49:04,328 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:49:59] 2025-10-12 02:49:04,328 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:49:59] 2025-10-12 02:49:04,353 | INFO     | did not find any defunct processes belonging to 3020924
[2025-10-11 19:49:59] 2025-10-12 02:49:04,364 | INFO     | did not find any defunct processes belonging to 3020924
[2025-10-11 19:49:59] 2025-10-12 02:49:04,365 | INFO     | ready for new job
[2025-10-11 19:49:59] 2025-10-12 02:49:04,365 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:49:59] 2025-10-12 02:49:04,366 | INFO     | ***************************************
[2025-10-11 19:49:59] 2025-10-12 02:49:04,371 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:49:59] 2025-10-12 02:49:04,371 | INFO     | ***************************************
[2025-10-11 19:49:59] 2025-10-12 02:49:04,371 | INFO     | 
[2025-10-11 19:49:59] 2025-10-12 02:49:04,373 | INFO     | architecture information:
[2025-10-11 19:49:59] 2025-10-12 02:49:04,373 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:49:59] 2025-10-12 02:49:04,402 | INFO     | cat /etc/os-release:
[2025-10-11 19:49:59] NAME="CentOS Linux"
[2025-10-11 19:49:59] VERSION="7 (Core)"
[2025-10-11 19:49:59] ID="centos"
[2025-10-11 19:49:59] ID_LIKE="rhel fedora"
[2025-10-11 19:49:59] VERSION_ID="7"
[2025-10-11 19:49:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:49:59] ANSI_COLOR="0;31"
[2025-10-11 19:49:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:49:59] HOME_URL="https://www.centos.org/"
[2025-10-11 19:49:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:49:59] 
[2025-10-11 19:49:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:49:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:49:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:49:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:49:59] 
[2025-10-11 19:49:59] 2025-10-12 02:49:04,402 | INFO     | ***************************************
[2025-10-11 19:49:59] 2025-10-12 02:49:04,905 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 19:49:59] 2025-10-12 02:49:04,922 | INFO     | sufficient remaining disk space (1718932733952 B)
[2025-10-11 19:49:59] 2025-10-12 02:49:04,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:49:59] 2025-10-12 02:49:04,922 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:49:59] 2025-10-12 02:49:04,922 | INFO     | update_server=False
[2025-10-11 19:49:59] 2025-10-12 02:49:04,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:49:59] 2025-10-12 02:49:04,922 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 19:49:59] 2025-10-12 02:49:04,933 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 19:49:59] 2025-10-12 02:49:04,933 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 19:49:59] 2025-10-12 02:49:04,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:49:59] 2025-10-12 02:49:04,934 | INFO     | will abort loop
[2025-10-11 19:49:59] 2025-10-12 02:49:04,934 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:49:59] 2025-10-12 02:49:04,934 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:49:59] 2025-10-12 02:49:04,934 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:49:59] 2025-10-12 02:49:04,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:49:59] 2025-10-12 02:49:05,298 | INFO     | all job control threads have been joined
[2025-10-11 19:49:59] 2025-10-12 02:49:05,568 | INFO     | all payload control threads have been joined
[2025-10-11 19:49:59] 2025-10-12 02:49:05,841 | INFO     | all data control threads have been joined
[2025-10-11 19:49:59] 2025-10-12 02:49:05,928 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:05,939 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:05,940 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:05,940 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:06,123 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:06,176 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:06,304 | INFO     | [job] control thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:06,574 | INFO     | [payload] control thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:06,857 | INFO     | [data] control thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:06,965 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:06,993 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:07,017 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:49:59] 2025-10-12 02:49:07,216 | INFO     | [job] validate thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:07,317 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:07,357 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:07,823 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:49:59] 2025-10-12 02:49:08,023 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:11,832 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:49:59] 2025-10-12 02:49:50,926 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:49:59] 2025-10-12 02:49:51,933 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352949712704)>', '<ExcThread(monitor, started 140352266688256)>']
[2025-10-11 19:49:59] 2025-10-12 02:49:52,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:49:59] 2025-10-12 02:49:52,266 | INFO     | [monitor] control thread has ended
[2025-10-11 19:49:59] 2025-10-12 02:49:56,959 | INFO     | all workflow threads have been joined
[2025-10-11 19:49:59] 2025-10-12 02:49:56,959 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:49:59] 2025-10-12 02:49:56,960 | INFO     | traces error code: 0
[2025-10-11 19:49:59] 2025-10-12 02:49:56,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:49:59] 2025-10-12 02:49:57,859 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:49:59] 2025-10-12 02:49:57,894 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:49:59] 2025-10-12 02:49:57,926 [wrapper] pilotpid: 3011012
[2025-10-11 19:49:59] 2025-10-12 02:49:57,972 [wrapper] Pilot exit status: 0
[2025-10-11 19:49:59] 2025-10-12 02:49:58,055 [wrapper] pandaids: 6839163195
[2025-10-11 19:49:59] 2025-10-12 02:49:58,498 [wrapper] cleanup supervisor_pilot 3011025 3011013
[2025-10-11 19:49:59] 2025-10-12 02:49:58,550 [wrapper] Test setup, not cleaning
[2025-10-11 19:49:59] 2025-10-12 02:49:58,591 [wrapper] apfmon messages muted
[2025-10-11 19:49:59] 2025-10-12 02:49:58,624 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:49:59] 2025-10-12 02:49:58,659 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:49:59]  *** Error codes and diagnostics ***
[2025-10-11 19:49:59]     "exeErrorCode": 65,
[2025-10-11 19:49:59]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 19:49:59]     "pilotErrorCode": 1305,
[2025-10-11 19:49:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 19:49:59]  *** Listing of results directory ***
[2025-10-11 19:49:59] total 220324
[2025-10-11 19:49:59] -rw-r--r--. 1 boinc boinc    557409 Oct 11 16:21 pilot3.tar.gz
[2025-10-11 19:49:59] -rw-r--r--. 1 boinc boinc      5112 Oct 11 17:04 queuedata.json
[2025-10-11 19:49:59] -rwx------. 1 boinc boinc     36292 Oct 11 17:05 runpilot2-wrapper.sh
[2025-10-11 19:49:59] -rw-r--r--. 1 boinc boinc       100 Oct 11 19:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:49:59] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 19:44 run_atlas
[2025-10-11 19:49:59] -rw-r--r--. 1 boinc boinc       105 Oct 11 19:44 job.xml
[2025-10-11 19:49:59] -rw-r--r--. 2 boinc boinc 221474968 Oct 11 19:44 EVNT.46676267._002745.pool.root.1
[2025-10-11 19:49:59] -rw-r--r--. 1 boinc boinc      6594 Oct 11 19:44 init_data.xml
[2025-10-11 19:49:59] -rw-r--r--. 2 boinc boinc     15120 Oct 11 19:44 start_atlas.sh
[2025-10-11 19:49:59] drwxrwx--x. 2 boinc boinc      4096 Oct 11 19:44 shared
[2025-10-11 19:49:59] -rw-r--r--. 2 boinc boinc    569677 Oct 11 19:44 input.tar.gz
[2025-10-11 19:49:59] -rw-r--r--. 1 boinc boinc         0 Oct 11 19:44 boinc_lockfile
[2025-10-11 19:49:59] -rw-r--r--. 1 boinc boinc      2549 Oct 11 19:44 pandaJob.out
[2025-10-11 19:49:59] -rw-------. 1 boinc boinc    975496 Oct 11 19:44 agis_schedconf.cvmfs.json
[2025-10-11 19:49:59] -rw-------. 1 boinc boinc   1560580 Oct 11 19:44 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:49:59] drwx------. 5 boinc boinc      4096 Oct 11 19:44 pilot3
[2025-10-11 19:49:59] -rw-r--r--. 1 boinc boinc       523 Oct 11 19:46 boinc_task_state.xml
[2025-10-11 19:49:59] -rw-------. 1 boinc boinc       989 Oct 11 19:46 memory_monitor_summary.json
[2025-10-11 19:49:59] -rw-------. 1 boinc boinc     22244 Oct 11 19:46 log.46676269._067359.job.log.tgz.1
[2025-10-11 19:49:59] -rw-------. 1 boinc boinc        95 Oct 11 19:48 pilot_heartbeat.json
[2025-10-11 19:49:59] -rw-------. 1 boinc boinc      8431 Oct 11 19:49 heartbeat.json
[2025-10-11 19:49:59] -rw-r--r--. 1 boinc boinc      8192 Oct 11 19:49 boinc_mmap_file
[2025-10-11 19:49:59] -rw-r--r--. 1 boinc boinc        22 Oct 11 19:49 wrapper_checkpoint.txt
[2025-10-11 19:49:59] -rw-------. 1 boinc boinc      4737 Oct 11 19:49 pilotlog.txt
[2025-10-11 19:49:59] -rw-------. 1 boinc boinc     92993 Oct 11 19:49 log.46676269._067359.job.log.1
[2025-10-11 19:49:59] -rw-------. 1 boinc boinc       188 Oct 11 19:49 output.list
[2025-10-11 19:49:59] -rw-r--r--. 1 boinc boinc       620 Oct 11 19:49 runtime_log
[2025-10-11 19:49:59] -rw-------. 1 boinc boinc    133120 Oct 11 19:49 result.tar.gz
[2025-10-11 19:49:59] -rw-------. 1 boinc boinc       644 Oct 11 19:49 UA6MDmIlyR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmq1hNDmlZX9wn.diag
[2025-10-11 19:49:59] -rw-r--r--. 1 boinc boinc      8528 Oct 11 19:49 runtime_log.err
[2025-10-11 19:49:59] -rw-r--r--. 1 boinc boinc     21391 Oct 11 19:49 stderr.txt
[2025-10-11 19:49:59] No HITS result produced
[2025-10-11 19:49:59]  *** Contents of shared directory: ***
[2025-10-11 19:49:59] total 217000
[2025-10-11 19:49:59] -rw-r--r--. 2 boinc boinc 221474968 Oct 11 19:44 ATLAS.root_0
[2025-10-11 19:49:59] -rw-r--r--. 2 boinc boinc     15120 Oct 11 19:44 start_atlas.sh
[2025-10-11 19:49:59] -rw-r--r--. 2 boinc boinc    569677 Oct 11 19:44 input.tar.gz
[2025-10-11 19:49:59] -rw-------. 1 boinc boinc    133120 Oct 11 19:49 result.tar.gz
19:50:00 (3003256): run_atlas exited; CPU time 27.827694
19:50:00 (3003256): called boinc_finish(0)

</stderr_txt>
]]>

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