Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:27:48 (12246): wrapper (7.7.26015): starting
22:27:48 (12246): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 22:27:48] Arguments: --nthreads 8
[2025-10-11 22:27:48] Threads: 8
[2025-10-11 22:27:48] Checking for CVMFS
[2025-10-11 22:27:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:27:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:27:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:27:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:27:48] 2.11.2.0 28294 52296 132996 151604 0 188 9413819 18432000 1833 130560 0 47286046 99.973 2339238 33437 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 22:27:48] CVMFS is ok
[2025-10-11 22:27:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:27:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:27:48] Further information can be found at the LHC@home message board.
[2025-10-11 22:27:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:27:48] Checking for apptainer binary...
[2025-10-11 22:27:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:27:48] Running /usr/bin/apptainer --version
[2025-10-11 22:27:48] apptainer version 1.3.2-1.el7
[2025-10-11 22:27:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:27:49] c-206-25.aglt2.org
[2025-10-11 22:27:49] apptainer works
[2025-10-11 22:27:49] Set ATHENA_PROC_NUMBER=8
[2025-10-11 22:27:49] Set ATHENA_CORE_NUMBER=8
[2025-10-11 22:27:49] Starting ATLAS job with PandaID=6838988575
[2025-10-11 22:27:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 01:34:24]  *** The last 200 lines of the pilot log: ***
[2025-10-12 01:34:24] 2025-10-12 05:33:19,011 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 01:34:24] 2025-10-12 05:33:19,017 | INFO     | fitting pss+swap vs Time
[2025-10-12 01:34:24] 2025-10-12 05:33:19,017 | INFO     | sum of square deviations: 1869302025.5
[2025-10-12 01:34:24] 2025-10-12 05:33:19,019 | INFO     | sum of deviations: 21702206466.500004
[2025-10-12 01:34:24] 2025-10-12 05:33:19,019 | INFO     | mean x: 1760241625.5
[2025-10-12 01:34:24] 2025-10-12 05:33:19,019 | INFO     | mean y: 2482081.510989011
[2025-10-12 01:34:24] 2025-10-12 05:33:19,019 | INFO     | -- intersect: -20433555897.59009
[2025-10-12 01:34:24] 2025-10-12 05:33:19,019 | INFO     | intersect: -20433555897.59009
[2025-10-12 01:34:24] 2025-10-12 05:33:19,020 | INFO     | chi2: 1.6726124420342758
[2025-10-12 01:34:24] 2025-10-12 05:33:19,020 | INFO     | sum of square deviations: 1719429448.0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,022 | INFO     | sum of deviations: 21214007637.0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,022 | INFO     | mean x: 1760241473.0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,022 | INFO     | mean y: 2481584.6327683614
[2025-10-12 01:34:24] 2025-10-12 05:33:19,022 | INFO     | -- intersect: -21715057390.06678
[2025-10-12 01:34:24] 2025-10-12 05:33:19,023 | INFO     | intersect: -21715057390.06678
[2025-10-12 01:34:24] 2025-10-12 05:33:19,023 | INFO     | chi2: 1.6740268874776436
[2025-10-12 01:34:24] 2025-10-12 05:33:19,023 | INFO     | current chi2=1.6740268874776436 (change=-0.08456504374961406 %)
[2025-10-12 01:34:24] 2025-10-12 05:33:19,023 | INFO     | right removable region: 176
[2025-10-12 01:34:24] 2025-10-12 05:33:19,024 | INFO     | sum of square deviations: 1719429448.0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,025 | INFO     | sum of deviations: -9691067560.0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,025 | INFO     | mean x: 1760241778.0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,026 | INFO     | mean y: 2513708.7175141242
[2025-10-12 01:34:24] 2025-10-12 05:33:19,026 | INFO     | -- intersect: 9923608181.29079
[2025-10-12 01:34:24] 2025-10-12 05:33:19,026 | INFO     | intersect: 9923608181.29079
[2025-10-12 01:34:24] 2025-10-12 05:33:19,026 | INFO     | chi2: 0.06277098386555571
[2025-10-12 01:34:24] 2025-10-12 05:33:19,027 | INFO     | current chi2=0.06277098386555571 (change=96.24712920410829 %)
[2025-10-12 01:34:24] 2025-10-12 05:33:19,027 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,028 | INFO     | sum of deviations: -13835553624.499996
[2025-10-12 01:34:24] 2025-10-12 05:33:19,029 | INFO     | mean x: 1760241930.5
[2025-10-12 01:34:24] 2025-10-12 05:33:19,029 | INFO     | mean y: 2518120.9825581396
[2025-10-12 01:34:24] 2025-10-12 05:33:19,029 | INFO     | -- intersect: 15437986756.299404
[2025-10-12 01:34:24] 2025-10-12 05:33:19,029 | INFO     | intersect: 15437986756.299404
[2025-10-12 01:34:24] 2025-10-12 05:33:19,029 | INFO     | chi2: 0.022314629225997477
[2025-10-12 01:34:24] 2025-10-12 05:33:19,030 | INFO     | current chi2=0.022314629225997477 (change=64.45072571462089 %)
[2025-10-12 01:34:24] 2025-10-12 05:33:19,030 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,031 | INFO     | sum of deviations: -12385201246.0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,032 | INFO     | mean x: 1760242083.0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,032 | INFO     | mean y: 2516458.0778443115
[2025-10-12 01:34:24] 2025-10-12 05:33:19,032 | INFO     | -- intersect: 15098562182.075539
[2025-10-12 01:34:24] 2025-10-12 05:33:19,032 | INFO     | intersect: 15098562182.075539
[2025-10-12 01:34:24] 2025-10-12 05:33:19,033 | INFO     | chi2: 0.02201896625122644
[2025-10-12 01:34:24] 2025-10-12 05:33:19,033 | INFO     | current chi2=0.02201896625122644 (change=1.3249737281163385 %)
[2025-10-12 01:34:24] 2025-10-12 05:33:19,033 | INFO     | left removable region: 30
[2025-10-12 01:34:24] 2025-10-12 05:33:19,033 | INFO     | sum of square deviations: 964976232.5
[2025-10-12 01:34:24] 2025-10-12 05:33:19,035 | INFO     | sum of deviations: -6248548938.5
[2025-10-12 01:34:24] 2025-10-12 05:33:19,035 | INFO     | mean x: 1760242357.5
[2025-10-12 01:34:24] 2025-10-12 05:33:19,035 | INFO     | mean y: 2509306.678082192
[2025-10-12 01:34:24] 2025-10-12 05:33:19,035 | INFO     | -- intersect: 11400676581.704063
[2025-10-12 01:34:24] 2025-10-12 05:33:19,035 | INFO     | intersect: 11400676581.704063
[2025-10-12 01:34:24] 2025-10-12 05:33:19,036 | INFO     | chi2: 0.01653970112208981
[2025-10-12 01:34:24] 2025-10-12 05:33:19,036 | INFO     | -- intersect: 11400676581.704063
[2025-10-12 01:34:24] 2025-10-12 05:33:19,036 | INFO     | current memory leak: -6.48 B/s (using 146 data points, chi2=0.02)
[2025-10-12 01:34:24] 2025-10-12 05:33:19,037 | INFO     | could have reported an average CPU frequency of 2570 MHz (10 samples)
[2025-10-12 01:34:24] 2025-10-12 05:33:19,037 | INFO     | ..............................
[2025-10-12 01:34:24] 2025-10-12 05:33:19,037 | INFO     | . Timing measurements:
[2025-10-12 01:34:24] 2025-10-12 05:33:19,037 | INFO     | . get job = 0 s
[2025-10-12 01:34:24] 2025-10-12 05:33:19,037 | INFO     | . initial setup = 2 s
[2025-10-12 01:34:24] 2025-10-12 05:33:19,037 | INFO     | . payload setup = 5 s
[2025-10-12 01:34:24] 2025-10-12 05:33:19,038 | INFO     | . stage-in = 0 s
[2025-10-12 01:34:24] 2025-10-12 05:33:19,038 | INFO     | . payload execution = 11084 s
[2025-10-12 01:34:24] 2025-10-12 05:33:19,038 | INFO     | . stage-out = 2 s
[2025-10-12 01:34:24] 2025-10-12 05:33:19,038 | INFO     | . log creation = 0 s
[2025-10-12 01:34:24] 2025-10-12 05:33:19,038 | INFO     | ..............................
[2025-10-12 01:34:24] 2025-10-12 05:33:19,647 | INFO     | 
[2025-10-12 01:34:24] 2025-10-12 05:33:19,647 | INFO     | job summary report
[2025-10-12 01:34:24] 2025-10-12 05:33:19,647 | INFO     | --------------------------------------------------
[2025-10-12 01:34:24] 2025-10-12 05:33:19,648 | INFO     | PanDA job id: 6838988575
[2025-10-12 01:34:24] 2025-10-12 05:33:19,648 | INFO     | task id: 46676269
[2025-10-12 01:34:24] 2025-10-12 05:33:19,648 | INFO     | errors: (none)
[2025-10-12 01:34:24] 2025-10-12 05:33:19,648 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 01:34:24] 2025-10-12 05:33:19,648 | INFO     | pilot state: finished 
[2025-10-12 01:34:24] 2025-10-12 05:33:19,648 | INFO     | transexitcode: 0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,649 | INFO     | exeerrorcode: 0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,649 | INFO     | exeerrordiag: 
[2025-10-12 01:34:24] 2025-10-12 05:33:19,649 | INFO     | exitcode: 0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,649 | INFO     | exitmsg: OK
[2025-10-12 01:34:24] 2025-10-12 05:33:19,649 | INFO     | cpuconsumptiontime: 83492 s
[2025-10-12 01:34:24] 2025-10-12 05:33:19,649 | INFO     | nevents: 400
[2025-10-12 01:34:24] 2025-10-12 05:33:19,650 | INFO     | neventsw: 0
[2025-10-12 01:34:24] 2025-10-12 05:33:19,650 | INFO     | pid: 22398
[2025-10-12 01:34:24] 2025-10-12 05:33:19,650 | INFO     | pgrp: 22398
[2025-10-12 01:34:24] 2025-10-12 05:33:19,650 | INFO     | corecount: 8
[2025-10-12 01:34:24] 2025-10-12 05:33:19,650 | INFO     | event service: False
[2025-10-12 01:34:24] 2025-10-12 05:33:19,650 | INFO     | sizes: {0: 2348857, 1: 2348857, 4: 2349147, 12: 2349175, 11093: 2378449, 11096: 2387447, 11098: 2387631, 11103: 2387853}
[2025-10-12 01:34:24] 2025-10-12 05:33:19,651 | INFO     | --------------------------------------------------
[2025-10-12 01:34:24] 2025-10-12 05:33:19,651 | INFO     | 
[2025-10-12 01:34:24] 2025-10-12 05:33:19,651 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 01:34:24] 2025-10-12 05:33:19,672 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,672 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,673 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,673 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,673 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,673 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,673 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,673 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,674 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,674 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,674 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,674 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,675 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,675 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,675 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,675 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 01:34:24] 2025-10-12 05:33:19,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 01:34:24] 2025-10-12 05:33:19,676 | INFO     | job 6838988575 has completed (purged errors)
[2025-10-12 01:34:24] 2025-10-12 05:33:19,676 | INFO     | overall cleanup function is called
[2025-10-12 01:34:24] 2025-10-12 05:33:20,684 | INFO     | --- collectZombieJob: --- 10, [22398]
[2025-10-12 01:34:24] 2025-10-12 05:33:20,684 | INFO     | zombie collector waiting for pid 22398
[2025-10-12 01:34:24] 2025-10-12 05:33:20,684 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 01:34:24] 2025-10-12 05:33:20,684 | INFO     | collected zombie processes
[2025-10-12 01:34:24] 2025-10-12 05:33:20,685 | INFO     | will attempt to kill all subprocesses of pid=22398
[2025-10-12 01:34:24] 2025-10-12 05:33:20,816 | INFO     | process IDs to be killed: [22398] (in reverse order)
[2025-10-12 01:34:24] 2025-10-12 05:33:20,875 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 01:34:24] 2025-10-12 05:33:20,876 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 01:34:24] 2025-10-12 05:33:20,882 | INFO     | did not find any defunct processes belonging to 22398
[2025-10-12 01:34:24] 2025-10-12 05:33:20,887 | INFO     | did not find any defunct processes belonging to 22398
[2025-10-12 01:34:24] 2025-10-12 05:33:20,887 | INFO     | ready for new job
[2025-10-12 01:34:24] 2025-10-12 05:33:20,887 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 01:34:24] 2025-10-12 05:33:20,929 | INFO     | ***************************************
[2025-10-12 01:34:24] 2025-10-12 05:33:20,930 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 01:34:24] 2025-10-12 05:33:20,930 | INFO     | ***************************************
[2025-10-12 01:34:24] 2025-10-12 05:33:20,930 | INFO     | 
[2025-10-12 01:34:24] 2025-10-12 05:33:20,931 | INFO     | architecture information:
[2025-10-12 01:34:24] 2025-10-12 05:33:20,932 | INFO     | executing command: cat /etc/os-release
[2025-10-12 01:34:24] 2025-10-12 05:33:20,948 | INFO     | cat /etc/os-release:
[2025-10-12 01:34:24] NAME="CentOS Linux"
[2025-10-12 01:34:24] VERSION="7 (Core)"
[2025-10-12 01:34:24] ID="centos"
[2025-10-12 01:34:24] ID_LIKE="rhel fedora"
[2025-10-12 01:34:24] VERSION_ID="7"
[2025-10-12 01:34:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 01:34:24] ANSI_COLOR="0;31"
[2025-10-12 01:34:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 01:34:24] HOME_URL="https://www.centos.org/"
[2025-10-12 01:34:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 01:34:24] 
[2025-10-12 01:34:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 01:34:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 01:34:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 01:34:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 01:34:24] 
[2025-10-12 01:34:24] 2025-10-12 05:33:20,948 | INFO     | ***************************************
[2025-10-12 01:34:24] 2025-10-12 05:33:21,451 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 01:34:24] 2025-10-12 05:33:21,491 | INFO     | sufficient remaining disk space (28368175104 B)
[2025-10-12 01:34:24] 2025-10-12 05:33:21,492 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 01:34:24] 2025-10-12 05:33:21,492 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 01:34:24] 2025-10-12 05:33:21,492 | INFO     | update_server=False
[2025-10-12 01:34:24] 2025-10-12 05:33:21,493 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 01:34:24] 2025-10-12 05:33:21,919 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 01:34:24] 2025-10-12 05:33:21,919 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 01:34:24] 2025-10-12 05:33:21,919 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:34:24] 2025-10-12 05:33:21,920 | INFO     | will abort loop
[2025-10-12 01:34:24] 2025-10-12 05:33:22,222 | INFO     | all job control threads have been joined
[2025-10-12 01:34:24] 2025-10-12 05:33:22,473 | INFO     | all payload control threads have been joined
[2025-10-12 01:34:24] 2025-10-12 05:33:22,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 01:34:24] 2025-10-12 05:33:22,499 | INFO     | [job] retrieve thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:22,523 | INFO     | all data control threads have been joined
[2025-10-12 01:34:24] 2025-10-12 05:33:22,706 | INFO     | [payload] validate_post thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:22,909 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:22,925 | INFO     | [job] job monitor thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:23,064 | INFO     | [payload] failed_post thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:23,156 | INFO     | [data] copytool_in thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:23,227 | INFO     | [job] control thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:23,317 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:23,478 | INFO     | [payload] control thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:23,528 | INFO     | [data] control thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:23,606 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:23,669 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:23,920 | INFO     | [job] validate thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:23,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 01:34:24] 2025-10-12 05:33:24,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 01:34:24] 2025-10-12 05:33:24,501 | INFO     | [data] copytool_out thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:25,213 | INFO     | [job] queue monitor thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:28,000 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 01:34:24] 2025-10-12 05:33:51,298 | INFO     | PID=15932 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 01:34:24] 2025-10-12 05:33:51,298 | INFO     | .. there are 3 such processes running
[2025-10-12 01:34:24] 2025-10-12 05:33:51,299 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 01:34:24] 2025-10-12 05:33:51,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 01:34:24] 2025-10-12 05:33:51,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 01:34:24] 2025-10-12 05:34:17,818 | INFO     | [monitor] cgroup control has ended
[2025-10-12 01:34:24] 2025-10-12 05:34:18,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140046334109504)>', '<ExcThread(monitor, started 140045906331392)>']
[2025-10-12 01:34:24] 2025-10-12 05:34:19,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 01:34:24] 2025-10-12 05:34:19,449 | INFO     | [monitor] control thread has ended
[2025-10-12 01:34:24] 2025-10-12 05:34:23,690 | INFO     | all workflow threads have been joined
[2025-10-12 01:34:24] 2025-10-12 05:34:23,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 01:34:24] 2025-10-12 05:34:23,691 | INFO     | traces error code: 0
[2025-10-12 01:34:24] 2025-10-12 05:34:23,692 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 01:34:24] 2025-10-12 05:34:23,839 [wrapper] ==== pilot stdout END ====
[2025-10-12 01:34:24] 2025-10-12 05:34:23,841 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 01:34:24] 2025-10-12 05:34:23,844 [wrapper] pilotpid: 15932
[2025-10-12 01:34:24] 2025-10-12 05:34:23,846 [wrapper] Pilot exit status: 0
[2025-10-12 01:34:24] 2025-10-12 05:34:23,855 [wrapper] pandaids: 6838988575
[2025-10-12 01:34:24] 2025-10-12 05:34:23,898 [wrapper] cleanup supervisor_pilot  1952 15933
[2025-10-12 01:34:24] 2025-10-12 05:34:23,900 [wrapper] Test setup, not cleaning
[2025-10-12 01:34:24] 2025-10-12 05:34:23,903 [wrapper] apfmon messages muted
[2025-10-12 01:34:24] 2025-10-12 05:34:23,905 [wrapper] ==== wrapper stdout END ====
[2025-10-12 01:34:24] 2025-10-12 05:34:23,908 [wrapper] ==== wrapper stderr END ====
[2025-10-12 01:34:24]  *** Error codes and diagnostics ***
[2025-10-12 01:34:24]     "exeErrorCode": 0,
[2025-10-12 01:34:24]     "exeErrorDiag": "",
[2025-10-12 01:34:24]     "pilotErrorCode": 0,
[2025-10-12 01:34:24]     "pilotErrorDiag": "",
[2025-10-12 01:34:24]  *** Listing of results directory ***
[2025-10-12 01:34:24] total 417176
[2025-10-12 01:34:24] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 16:53 pilot3.tar.gz
[2025-10-12 01:34:24] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 17:02 queuedata.json
[2025-10-12 01:34:24] -rwx------ 1 boincer umatlas     36292 Oct 11 17:02 runpilot2-wrapper.sh
[2025-10-12 01:34:24] -rw-r--r-- 1 boincer umatlas       100 Oct 11 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 01:34:24] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 22:27 run_atlas
[2025-10-12 01:34:24] -rw-r--r-- 1 boincer umatlas       105 Oct 11 22:27 job.xml
[2025-10-12 01:34:24] -rw-r--r-- 2 boincer umatlas 220087955 Oct 11 22:27 EVNT.46676267._002609.pool.root.1
[2025-10-12 01:34:24] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 22:27 start_atlas.sh
[2025-10-12 01:34:24] drwxrwx--x 2 boincer umatlas      4096 Oct 11 22:27 shared
[2025-10-12 01:34:24] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 22:27 input.tar.gz
[2025-10-12 01:34:24] -rw-r--r-- 1 boincer umatlas         0 Oct 11 22:27 boinc_lockfile
[2025-10-12 01:34:24] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 22:27 pandaJob.out
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas    975496 Oct 11 22:27 agis_schedconf.cvmfs.json
[2025-10-12 01:34:24] drwx------ 5 boincer umatlas      4096 Oct 11 22:28 pilot3
[2025-10-12 01:34:24] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 01:30 init_data.xml
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas 199188943 Oct 12 01:32 HITS.46676269._065007.pool.root.1
[2025-10-12 01:34:24] -rw-r--r-- 1 boincer umatlas       531 Oct 12 01:32 boinc_task_state.xml
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas      1054 Oct 12 01:33 memory_monitor_summary.json
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas   1560580 Oct 12 01:33 agis_ddmendpoints.agis.ALL.json
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas    436335 Oct 12 01:33 log.46676269._065007.job.log.tgz.1
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas      7857 Oct 12 01:33 heartbeat.json
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas        95 Oct 12 01:33 pilot_heartbeat.json
[2025-10-12 01:34:24] -rw-r--r-- 1 boincer umatlas        28 Oct 12 01:34 wrapper_checkpoint.txt
[2025-10-12 01:34:24] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 01:34 boinc_mmap_file
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas      5007 Oct 12 01:34 pilotlog.txt
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas   1564961 Oct 12 01:34 log.46676269._065007.job.log.1
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas       357 Oct 12 01:34 output.list
[2025-10-12 01:34:24] -rw-r--r-- 1 boincer umatlas       620 Oct 12 01:34 runtime_log
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas   2017280 Oct 12 01:34 result.tar.gz
[2025-10-12 01:34:24] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 01:34 runtime_log.err
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas       661 Oct 12 01:34 QKRKDmwuvR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYbSMDm8A1wfm.diag
[2025-10-12 01:34:24] -rw-r--r-- 1 boincer umatlas     20907 Oct 12 01:34 stderr.txt
[2025-10-12 01:34:24] HITS file was successfully produced:
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas 199188943 Oct 12 01:32 shared/HITS.pool.root.1
[2025-10-12 01:34:24]  *** Contents of shared directory: ***
[2025-10-12 01:34:24] total 412012
[2025-10-12 01:34:24] -rw-r--r-- 2 boincer umatlas 220087955 Oct 11 22:27 ATLAS.root_0
[2025-10-12 01:34:24] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 22:27 start_atlas.sh
[2025-10-12 01:34:24] -rw-r--r-- 2 boincer umatlas    569683 Oct 11 22:27 input.tar.gz
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas 199188943 Oct 12 01:32 HITS.pool.root.1
[2025-10-12 01:34:24] -rw------- 1 boincer umatlas   2017280 Oct 12 01:34 result.tar.gz
01:34:25 (12246): run_atlas exited; CPU time 83619.426447
01:34:25 (12246): called boinc_finish(0)

</stderr_txt>
]]>

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