Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:30:53 (2905479): wrapper (7.7.26015): starting
18:30:53 (2905479): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 18:30:53] Arguments: --nthreads 3
[2025-10-12 18:30:53] Threads: 3
[2025-10-12 18:30:53] Checking for CVMFS
[2025-10-12 18:30:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:30:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:30:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:30:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:30:54] 2.9.2.0 185998 8917 87232 151627 3 9 5050956 36864000 12 130560 0 7181706 99.991 307132 897 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 18:30:54] CVMFS is ok
[2025-10-12 18:30:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:30:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:30:54] Further information can be found at the LHC@home message board.
[2025-10-12 18:30:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:30:54] Checking for apptainer binary...
[2025-10-12 18:30:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:30:54] Running /usr/bin/apptainer --version
[2025-10-12 18:30:54] apptainer version 1.4.1-1.1
[2025-10-12 18:30:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:30:54] thA387a
[2025-10-12 18:30:54] apptainer works
[2025-10-12 18:30:54] Set ATHENA_PROC_NUMBER=3
[2025-10-12 18:30:54] Set ATHENA_CORE_NUMBER=3
[2025-10-12 18:30:54] Starting ATLAS job with PandaID=6838988566
[2025-10-12 18:30:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:51:10]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:51:10] 2025-10-12 17:50:08,125 | INFO     | aborting loop
[2025-10-12 19:51:10] 2025-10-12 17:50:08,207 | INFO     | all payload control threads have been joined
[2025-10-12 19:51:10] 2025-10-12 17:50:08,251 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:08,251 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:08,532 | INFO     | [job] control thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:08,547 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:08,667 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:08,914 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:09,049 | INFO     | [job] validate thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:09,079 | INFO     | [data] control thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:09,131 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:09,175 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:09,212 | INFO     | [payload] control thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:09,233 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:09,247 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:09,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:51:10] 2025-10-12 17:50:09,641 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:13,429 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:50:18,004 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:51:10] 2025-10-12 17:50:19,009 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:51:10] 2025-10-12 17:51:04,595 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:51:10] 2025-10-12 17:51:05,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140072507762496)>', '<ExcThread(monitor, started 140071348983552)>']
[2025-10-12 19:51:10] 2025-10-12 17:51:05,545 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:51:10] 2025-10-12 17:51:05,545 | INFO     | [monitor] control thread has ended
[2025-10-12 19:51:10] 2025-10-12 17:51:10,443 | INFO     | all workflow threads have been joined
[2025-10-12 19:51:10] 2025-10-12 17:51:10,443 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:51:10] 2025-10-12 17:51:10,444 | INFO     | traces error code: 0
[2025-10-12 19:51:10] 2025-10-12 17:51:10,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:51:10] 2025-10-12 17:51:10,496 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:51:10] 2025-10-12 17:51:10,499 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:51:10] 2025-10-12 17:51:10,501 [wrapper] pilotpid: 2909198
[2025-10-12 19:51:10] 2025-10-12 17:51:10,503 [wrapper] Pilot exit status: 0
[2025-10-12 19:51:10] 2025-10-12 17:51:10,510 [wrapper] pandaids: 6838988566
[2025-10-12 19:51:10] 2025-10-12 17:51:10,526 [wrapper] cleanup supervisor_pilot 2927622 2909199
[2025-10-12 19:51:10] 2025-10-12 17:51:10,529 [wrapper] Test setup, not cleaning
[2025-10-12 19:51:10] 2025-10-12 17:51:10,531 [wrapper] apfmon messages muted
[2025-10-12 19:51:10] 2025-10-12 17:51:10,533 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:51:10] 2025-10-12 17:51:10,535 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:51:10]  *** Error codes and diagnostics ***
[2025-10-12 19:51:10]     "exeErrorCode": 0,
[2025-10-12 19:51:10]     "exeErrorDiag": "",
[2025-10-12 19:51:10]     "pilotErrorCode": 0,
[2025-10-12 19:51:10]     "pilotErrorDiag": "",
[2025-10-12 19:51:10]  *** Listing of results directory ***
[2025-10-12 19:51:10] total 409404
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc    557409 Oct 11 22:53 pilot3.tar.gz
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc      5112 Oct 11 23:02 queuedata.json
[2025-10-12 19:51:10] -rwx------ 1 boinc boinc     36292 Oct 11 23:02 runpilot2-wrapper.sh
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc       100 Oct 12 18:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:51:10] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 18:30 run_atlas
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc       105 Oct 12 18:30 job.xml
[2025-10-12 19:51:10] -rw-r--r-- 2 boinc boinc 220087955 Oct 12 18:30 EVNT.46676267._002609.pool.root.1
[2025-10-12 19:51:10] -rw-r--r-- 2 boinc boinc    569682 Oct 12 18:30 input.tar.gz
[2025-10-12 19:51:10] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:30 start_atlas.sh
[2025-10-12 19:51:10] drwxrwx--x 2 boinc boinc      4096 Oct 12 18:30 shared
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:30 boinc_setup_complete
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc      6439 Oct 12 18:30 init_data.xml
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:30 boinc_lockfile
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc      2550 Oct 12 18:30 pandaJob.out
[2025-10-12 19:51:10] -rw------- 1 boinc boinc    975528 Oct 12 18:30 agis_schedconf.cvmfs.json
[2025-10-12 19:51:10] -rw------- 1 boinc boinc   1560580 Oct 12 18:30 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:51:10] drwx------ 5 boinc boinc      4096 Oct 12 18:30 pilot3
[2025-10-12 19:51:10] -rw------- 1 boinc boinc        95 Oct 12 19:49 pilot_heartbeat.json
[2025-10-12 19:51:10] -rw------- 1 boinc boinc 193341329 Oct 12 19:49 HITS.46676269._064998.pool.root.1
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc       529 Oct 12 19:49 boinc_task_state.xml
[2025-10-12 19:51:10] -rw------- 1 boinc boinc      1022 Oct 12 19:49 memory_monitor_summary.json
[2025-10-12 19:51:10] -rw------- 1 boinc boinc    256622 Oct 12 19:49 log.46676269._064998.job.log.tgz.1
[2025-10-12 19:51:10] -rw------- 1 boinc boinc      7764 Oct 12 19:50 heartbeat.json
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc        27 Oct 12 19:51 wrapper_checkpoint.txt
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc      8192 Oct 12 19:51 boinc_mmap_file
[2025-10-12 19:51:10] -rw------- 1 boinc boinc      4628 Oct 12 19:51 pilotlog.txt
[2025-10-12 19:51:10] -rw------- 1 boinc boinc    700152 Oct 12 19:51 log.46676269._064998.job.log.1
[2025-10-12 19:51:10] -rw------- 1 boinc boinc       357 Oct 12 19:51 output.list
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:51 runtime_log
[2025-10-12 19:51:10] -rw------- 1 boinc boinc    972800 Oct 12 19:51 result.tar.gz
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc      8782 Oct 12 19:51 runtime_log.err
[2025-10-12 19:51:10] -rw------- 1 boinc boinc       659 Oct 12 19:51 9TKODmvuvR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmPbSMDmACHSxm.diag
[2025-10-12 19:51:10] -rw-r--r-- 1 boinc boinc      6146 Oct 12 19:51 stderr.txt
[2025-10-12 19:51:10] HITS file was successfully produced:
[2025-10-12 19:51:10] -rw------- 1 boinc boinc 193341329 Oct 12 19:49 shared/HITS.pool.root.1
[2025-10-12 19:51:10]  *** Contents of shared directory: ***
[2025-10-12 19:51:10] total 405280
[2025-10-12 19:51:10] -rw-r--r-- 2 boinc boinc 220087955 Oct 12 18:30 ATLAS.root_0
[2025-10-12 19:51:10] -rw-r--r-- 2 boinc boinc    569682 Oct 12 18:30 input.tar.gz
[2025-10-12 19:51:10] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:30 start_atlas.sh
[2025-10-12 19:51:10] -rw------- 1 boinc boinc 193341329 Oct 12 19:49 HITS.pool.root.1
[2025-10-12 19:51:10] -rw------- 1 boinc boinc    972800 Oct 12 19:51 result.tar.gz
19:51:12 (2905479): run_atlas exited; CPU time 13534.515734
19:51:12 (2905479): called boinc_finish(0)

</stderr_txt>
]]>

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