Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:43 (4030279): wrapper (7.7.26015): starting
00:04:43 (4030279): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:04:43] Arguments: --nthreads 12
[2025-10-12 00:04:43] Threads: 12
[2025-10-12 00:04:43] Checking for CVMFS
[2025-10-12 00:04:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:04:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:04:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:04:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:04:46] 2.13.2.0 5414 5174 138920 151606 1 29 21102645 40960001 13863 16776704 0 8134918 99.704 4422191 37083 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:04:46] CVMFS is ok
[2025-10-12 00:04:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:04:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:04:46] Further information can be found at the LHC@home message board.
[2025-10-12 00:04:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:04:46] Checking for apptainer binary...
[2025-10-12 00:04:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:04:46] Running /usr/bin/apptainer --version
[2025-10-12 00:04:46] apptainer version 1.4.3-1.el9
[2025-10-12 00:04:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:04:47] c-210-33-3.aglt2.org
[2025-10-12 00:04:47] apptainer works
[2025-10-12 00:04:47] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:04:47] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:04:47] Starting ATLAS job with PandaID=6838988704
[2025-10-12 00:04:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:33:05]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:33:05] 2025-10-12 11:13:10,734 | INFO     | sum of square deviations: 22321691470.884586
[2025-10-12 07:33:05] 2025-10-12 11:13:10,784 | INFO     | sum of deviations: 84358847574.06726
[2025-10-12 07:33:05] 2025-10-12 11:13:10,784 | INFO     | mean x: 1760254859.3365386
[2025-10-12 07:33:05] 2025-10-12 11:13:10,784 | INFO     | mean y: 2645179.449519231
[2025-10-12 07:33:05] 2025-10-12 11:13:10,784 | INFO     | -- intersect: -6649766066.533787
[2025-10-12 07:33:05] 2025-10-12 11:13:10,784 | INFO     | intersect: -6649766066.533787
[2025-10-12 07:33:05] 2025-10-12 11:13:10,785 | INFO     | chi2: 5.125228014254823
[2025-10-12 07:33:05] 2025-10-12 11:13:10,786 | INFO     | sum of square deviations: 21526483024.03403
[2025-10-12 07:33:05] 2025-10-12 11:13:10,818 | INFO     | sum of deviations: 170557814504.6596
[2025-10-12 07:33:05] 2025-10-12 11:13:10,819 | INFO     | mean x: 1760254706.8442822
[2025-10-12 07:33:05] 2025-10-12 11:13:10,819 | INFO     | mean y: 2661630.5571776154
[2025-10-12 07:33:05] 2025-10-12 11:13:10,819 | INFO     | -- intersect: -13944121754.155672
[2025-10-12 07:33:05] 2025-10-12 11:13:10,819 | INFO     | intersect: -13944121754.155672
[2025-10-12 07:33:05] 2025-10-12 11:13:10,820 | INFO     | chi2: 2.864588305980587
[2025-10-12 07:33:05] 2025-10-12 11:13:10,820 | INFO     | current chi2=2.864588305980587 (change=44.10808069390683 %)
[2025-10-12 07:33:05] 2025-10-12 11:13:10,820 | INFO     | sum of square deviations: 20750366022.33497
[2025-10-12 07:33:05] 2025-10-12 11:13:10,878 | INFO     | sum of deviations: 167626887239.2758
[2025-10-12 07:33:05] 2025-10-12 11:13:10,879 | INFO     | mean x: 1760254554.3497536
[2025-10-12 07:33:05] 2025-10-12 11:13:10,879 | INFO     | mean y: 2661054.2586206896
[2025-10-12 07:33:05] 2025-10-12 11:13:10,879 | INFO     | -- intersect: -14217135906.277355
[2025-10-12 07:33:05] 2025-10-12 11:13:10,879 | INFO     | intersect: -14217135906.277355
[2025-10-12 07:33:05] 2025-10-12 11:13:10,939 | INFO     | chi2: 2.865156079637081
[2025-10-12 07:33:05] 2025-10-12 11:13:10,939 | INFO     | current chi2=2.865156079637081 (change=-0.019820427783943963 %)
[2025-10-12 07:33:05] 2025-10-12 11:13:10,939 | INFO     | right removable region: 405
[2025-10-12 07:33:05] 2025-10-12 11:13:10,940 | INFO     | sum of square deviations: 21526321130.03403
[2025-10-12 07:33:05] 2025-10-12 11:13:10,983 | INFO     | sum of deviations: -27258456324.54012
[2025-10-12 07:33:05] 2025-10-12 11:13:10,984 | INFO     | mean x: 1760255011.8442822
[2025-10-12 07:33:05] 2025-10-12 11:13:10,984 | INFO     | mean y: 2666530.897810219
[2025-10-12 07:33:05] 2025-10-12 11:13:10,984 | INFO     | -- intersect: 2231650948.187062
[2025-10-12 07:33:05] 2025-10-12 11:13:10,984 | INFO     | intersect: 2231650948.187062
[2025-10-12 07:33:05] 2025-10-12 11:13:10,985 | INFO     | chi2: 2.6220258129250817
[2025-10-12 07:33:05] 2025-10-12 11:13:10,985 | INFO     | current chi2=2.6220258129250817 (change=48.84079682635723 %)
[2025-10-12 07:33:05] 2025-10-12 11:13:10,986 | INFO     | sum of square deviations: 20750067914.63283
[2025-10-12 07:33:05] 2025-10-12 11:13:11,118 | INFO     | sum of deviations: -65381357214.20688
[2025-10-12 07:33:05] 2025-10-12 11:13:11,119 | INFO     | mean x: 1760255164.3522167
[2025-10-12 07:33:05] 2025-10-12 11:13:11,119 | INFO     | mean y: 2673998.896551724
[2025-10-12 07:33:05] 2025-10-12 11:13:11,119 | INFO     | -- intersect: 5549059300.484187
[2025-10-12 07:33:05] 2025-10-12 11:13:11,119 | INFO     | intersect: 5549059300.484187
[2025-10-12 07:33:05] 2025-10-12 11:13:11,120 | INFO     | chi2: 2.3169497244710104
[2025-10-12 07:33:05] 2025-10-12 11:13:11,120 | INFO     | current chi2=2.3169497244710104 (change=11.635129103238471 %)
[2025-10-12 07:33:05] 2025-10-12 11:13:11,120 | INFO     | left removable region: 20
[2025-10-12 07:33:05] 2025-10-12 11:13:11,120 | INFO     | sum of square deviations: 17693645854.503986
[2025-10-12 07:33:05] 2025-10-12 11:13:11,143 | INFO     | sum of deviations: 17048747033.062338
[2025-10-12 07:33:05] 2025-10-12 11:13:11,143 | INFO     | mean x: 1760255133.8805194
[2025-10-12 07:33:05] 2025-10-12 11:13:11,144 | INFO     | mean y: 2691417.0883116885
[2025-10-12 07:33:05] 2025-10-12 11:13:11,144 | INFO     | -- intersect: -1693405856.359662
[2025-10-12 07:33:05] 2025-10-12 11:13:11,144 | INFO     | intersect: -1693405856.359662
[2025-10-12 07:33:05] 2025-10-12 11:13:11,144 | INFO     | chi2: 0.004588764009548536
[2025-10-12 07:33:05] 2025-10-12 11:13:11,144 | INFO     | -- intersect: -1693405856.359662
[2025-10-12 07:33:05] 2025-10-12 11:13:11,144 | INFO     | current memory leak: 0.96 B/s (using 385 data points, chi2=0.00)
[2025-10-12 07:33:05] 2025-10-12 11:13:11,145 | INFO     | could have reported an average CPU frequency of 2504 MHz (17 samples)
[2025-10-12 07:33:05] 2025-10-12 11:13:11,145 | INFO     | ..............................
[2025-10-12 07:33:05] 2025-10-12 11:13:11,146 | INFO     | . Timing measurements:
[2025-10-12 07:33:05] 2025-10-12 11:13:11,146 | INFO     | . get job = 1 s
[2025-10-12 07:33:05] 2025-10-12 11:13:11,146 | INFO     | . initial setup = 15 s
[2025-10-12 07:33:05] 2025-10-12 11:13:11,146 | INFO     | . payload setup = 59 s
[2025-10-12 07:33:05] 2025-10-12 11:13:11,146 | INFO     | . stage-in = 0 s
[2025-10-12 07:33:05] 2025-10-12 11:13:11,146 | INFO     | . payload execution = 25359 s
[2025-10-12 07:33:05] 2025-10-12 11:13:11,146 | INFO     | . stage-out = 11 s
[2025-10-12 07:33:05] 2025-10-12 11:13:11,146 | INFO     | . log creation = 2 s
[2025-10-12 07:33:05] 2025-10-12 11:13:11,146 | INFO     | ..............................
[2025-10-12 07:33:05] 2025-10-12 11:13:11,740 | INFO     | PID=4035646 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 07:33:05] 2025-10-12 11:13:11,740 | INFO     | .. there are 11 such processes running
[2025-10-12 07:33:05] 2025-10-12 11:13:11,988 | INFO     | 
[2025-10-12 07:33:05] 2025-10-12 11:13:11,990 | INFO     | job summary report
[2025-10-12 07:33:05] 2025-10-12 11:13:11,990 | INFO     | --------------------------------------------------
[2025-10-12 07:33:05] 2025-10-12 11:13:11,990 | INFO     | PanDA job id: 6838988704
[2025-10-12 07:33:05] 2025-10-12 11:13:11,990 | INFO     | task id: 46676269
[2025-10-12 07:33:05] 2025-10-12 11:13:11,990 | INFO     | errors: (none)
[2025-10-12 07:33:05] 2025-10-12 11:13:11,990 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:33:05] 2025-10-12 11:13:11,990 | INFO     | pilot state: finished 
[2025-10-12 07:33:05] 2025-10-12 11:13:11,990 | INFO     | transexitcode: 0
[2025-10-12 07:33:05] 2025-10-12 11:13:11,991 | INFO     | exeerrorcode: 0
[2025-10-12 07:33:05] 2025-10-12 11:13:11,991 | INFO     | exeerrordiag: 
[2025-10-12 07:33:05] 2025-10-12 11:13:11,991 | INFO     | exitcode: 0
[2025-10-12 07:33:05] 2025-10-12 11:13:11,991 | INFO     | exitmsg: OK
[2025-10-12 07:33:05] 2025-10-12 11:13:11,991 | INFO     | cpuconsumptiontime: 45881 s
[2025-10-12 07:33:05] 2025-10-12 11:13:11,991 | INFO     | nevents: 400
[2025-10-12 07:33:05] 2025-10-12 11:13:11,991 | INFO     | neventsw: 0
[2025-10-12 07:33:05] 2025-10-12 11:13:11,991 | INFO     | pid: 4042713
[2025-10-12 07:33:05] 2025-10-12 11:13:11,991 | INFO     | pgrp: 4042713
[2025-10-12 07:33:05] 2025-10-12 11:13:11,991 | INFO     | corecount: 12
[2025-10-12 07:33:05] 2025-10-12 11:13:11,992 | INFO     | event service: False
[2025-10-12 07:33:05] 2025-10-12 11:13:11,992 | INFO     | sizes: {0: 2347976, 2: 2348577, 3: 2348661, 4: 2348689, 5: 2348944, 6: 2348944, 17: 2349100, 28: 2349128, 40: 2349156, 50: 2349446, 51: 2349474, 25424: 2385576, 25
[2025-10-12 07:33:05] 2025-10-12 11:13:11,992 | INFO     | --------------------------------------------------
[2025-10-12 07:33:05] 2025-10-12 11:13:11,992 | INFO     | 
[2025-10-12 07:33:05] 2025-10-12 11:13:11,992 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 07:33:05] 2025-10-12 11:13:12,364 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,364 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,364 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,364 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,364 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,364 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,364 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,364 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,365 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,365 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,365 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,365 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,365 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,365 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,365 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,365 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,365 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,365 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:33:05] 2025-10-12 11:13:12,365 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,383 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:33:05] 2025-10-12 11:13:12,384 | INFO     | job 6838988704 has completed (purged errors)
[2025-10-12 07:33:05] 2025-10-12 11:13:12,384 | INFO     | overall cleanup function is called
[2025-10-12 07:33:05] 2025-10-12 11:13:13,392 | INFO     | --- collectZombieJob: --- 10, [4042713]
[2025-10-12 07:33:05] 2025-10-12 11:13:13,393 | INFO     | zombie collector waiting for pid 4042713
[2025-10-12 07:33:05] 2025-10-12 11:13:13,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:33:05] 2025-10-12 11:13:13,393 | INFO     | collected zombie processes
[2025-10-12 07:33:05] 2025-10-12 11:13:13,393 | INFO     | will attempt to kill all subprocesses of pid=4042713
[2025-10-12 07:33:05] 2025-10-12 11:13:15,450 | INFO     | process IDs to be killed: [4042713] (in reverse order)
[2025-10-12 07:33:05] 2025-10-12 11:13:16,204 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:33:05] 2025-10-12 11:13:16,204 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:33:05] 2025-10-12 11:13:16,289 | INFO     | did not find any defunct processes belonging to 4042713
[2025-10-12 07:33:05] 2025-10-12 11:13:16,428 | INFO     | did not find any defunct processes belonging to 4042713
[2025-10-12 07:33:05] 2025-10-12 11:13:16,428 | INFO     | ready for new job
[2025-10-12 07:33:05] 2025-10-12 11:13:16,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:33:05] 2025-10-12 11:13:16,465 | INFO     | ***************************************
[2025-10-12 07:33:05] 2025-10-12 11:13:16,465 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:33:05] 2025-10-12 11:13:16,465 | INFO     | ***************************************
[2025-10-12 07:33:05] 2025-10-12 11:13:16,465 | INFO     | 
[2025-10-12 07:33:05] 2025-10-12 11:13:16,504 | INFO     | architecture information:
[2025-10-12 07:33:05] 2025-10-12 11:13:16,519 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:33:05] 2025-10-12 11:13:16,748 | INFO     | cat /etc/os-release:
[2025-10-12 07:33:05] NAME="CentOS Linux"
[2025-10-12 07:33:05] VERSION="7 (Core)"
[2025-10-12 07:33:05] ID="centos"
[2025-10-12 07:33:05] ID_LIKE="rhel fedora"
[2025-10-12 07:33:05] VERSION_ID="7"
[2025-10-12 07:33:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:33:05] ANSI_COLOR="0;31"
[2025-10-12 07:33:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:33:05] HOME_URL="https://www.centos.org/"
[2025-10-12 07:33:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:33:05] 
[2025-10-12 07:33:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:33:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:33:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:33:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:33:05] 
[2025-10-12 07:33:05] 2025-10-12 11:13:16,748 | INFO     | ***************************************
[2025-10-12 07:33:05] 2025-10-12 11:13:17,252 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 07:33:05] 2025-10-12 11:13:17,533 | INFO     | sufficient remaining disk space (73457991680 B)
[2025-10-12 07:33:05] 2025-10-12 11:13:17,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:33:05] 2025-10-12 11:13:17,543 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:33:05] 2025-10-12 11:13:17,543 | INFO     | update_server=False
[2025-10-12 07:33:05] 2025-10-12 11:13:17,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:33:05] 2025-10-12 11:13:17,544 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:33:05] 2025-10-12 11:13:17,741 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:33:05] 2025-10-12 11:13:17,751 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 07:33:05] 2025-10-12 11:13:17,752 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 07:33:05] 2025-10-12 11:13:17,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:33:05] 2025-10-12 11:13:17,752 | INFO     | will abort loop
[2025-10-12 07:33:05] 2025-10-12 11:13:17,799 | INFO     | all job control threads have been joined
[2025-10-12 07:33:05] 2025-10-12 11:13:18,139 | INFO     | all data control threads have been joined
[2025-10-12 07:33:05] 2025-10-12 11:13:18,548 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:18,550 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:18,587 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:18,614 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:18,758 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:18,767 | INFO     | all payload control threads have been joined
[2025-10-12 07:33:05] 2025-10-12 11:13:18,805 | INFO     | [job] control thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:18,854 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:18,862 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:19,145 | INFO     | [data] control thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:19,334 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:19,339 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:19,345 | INFO     | [job] validate thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:19,366 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:19,748 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:19,773 | INFO     | [payload] control thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:20,846 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:33:05] 2025-10-12 11:13:24,855 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:33:05] 2025-10-12 11:13:34,870 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:33:05] 2025-10-12 11:13:35,076 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139892466755392)>', '<ExcThread(monitor, started 139891824379648)>']
[2025-10-12 07:33:05] 2025-10-12 11:13:40,102 | INFO     | all workflow threads have been joined
[2025-10-12 07:33:05] 2025-10-12 11:13:40,103 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:33:05] 2025-10-12 11:13:40,103 | INFO     | traces error code: 0
[2025-10-12 07:33:05] 2025-10-12 11:13:40,103 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:33:05] 2025-10-12 11:13:45,914 | INFO     | PID=4035646 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 07:33:05] 2025-10-12 11:13:45,915 | INFO     | .. there are 11 such processes running
[2025-10-12 07:33:05] 2025-10-12 11:13:45,915 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:33:05] 2025-10-12 11:13:45,915 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:33:05] 2025-10-12 11:13:45,915 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:33:05] 2025-10-12 11:13:45,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:33:05] 2025-10-12 11:13:45,915 | INFO     | [monitor] control thread has ended
[2025-10-12 07:33:05] 2025-10-12 11:13:47,327 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:33:05] 2025-10-12 11:13:47,365 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:33:05] 2025-10-12 11:13:47,421 [wrapper] pilotpid: 4035646
[2025-10-12 07:33:05] 2025-10-12 11:13:47,463 [wrapper] Pilot exit status: 0
[2025-10-12 07:33:05] 2025-10-12 11:13:47,585 [wrapper] pandaids: 6838988704
[2025-10-12 07:33:05] 2025-10-12 11:13:47,643 [wrapper] cleanup supervisor_pilot  486298 4035647
[2025-10-12 07:33:05] 2025-10-12 11:13:47,647 [wrapper] Test setup, not cleaning
[2025-10-12 07:33:05] 2025-10-12 11:13:47,650 [wrapper] apfmon messages muted
[2025-10-12 07:33:05] 2025-10-12 11:13:47,653 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:33:05] 2025-10-12 11:13:47,656 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:33:05]  *** Error codes and diagnostics ***
[2025-10-12 07:33:05]     "exeErrorCode": 0,
[2025-10-12 07:33:05]     "exeErrorDiag": "",
[2025-10-12 07:33:05]     "pilotErrorCode": 0,
[2025-10-12 07:33:05]     "pilotErrorDiag": "",
[2025-10-12 07:33:05]  *** Listing of results directory ***
[2025-10-12 07:33:05] total 412764
[2025-10-12 07:33:05] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 16:53 pilot3.tar.gz
[2025-10-12 07:33:05] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 17:07 queuedata.json
[2025-10-12 07:33:05] -rwx------. 1 boincer umatlas     36292 Oct 11 17:08 runpilot2-wrapper.sh
[2025-10-12 07:33:05] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:33:05] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:04 run_atlas
[2025-10-12 07:33:05] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:04 job.xml
[2025-10-12 07:33:05] -rw-r--r--. 2 boincer umatlas 219605037 Oct 12 00:04 EVNT.46676267._002616.pool.root.1
[2025-10-12 07:33:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:04 start_atlas.sh
[2025-10-12 07:33:05] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:04 shared
[2025-10-12 07:33:05] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 00:04 input.tar.gz
[2025-10-12 07:33:05] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:04 boinc_lockfile
[2025-10-12 07:33:05] -rw-r--r--. 1 boincer umatlas      2548 Oct 12 00:04 pandaJob.out
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas    975512 Oct 12 00:06 agis_schedconf.cvmfs.json
[2025-10-12 07:33:05] drwx------. 5 boincer umatlas      4096 Oct 12 00:06 pilot3
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas 191559545 Oct 12 07:09 HITS.46676269._065136.pool.root.1
[2025-10-12 07:33:05] -rw-r--r--. 1 boincer umatlas       531 Oct 12 07:09 boinc_task_state.xml
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas      1043 Oct 12 07:12 memory_monitor_summary.json
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas   1560580 Oct 12 07:12 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas    644191 Oct 12 07:12 log.46676269._065136.job.log.tgz.1
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas        95 Oct 12 07:12 pilot_heartbeat.json
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas      7830 Oct 12 07:13 heartbeat.json
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas       823 Oct 12 07:13 pilotlog.txt
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas   3158553 Oct 12 07:13 log.46676269._065136.job.log.1
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas       357 Oct 12 07:13 output.list
[2025-10-12 07:33:05] -rw-r--r--. 1 boincer umatlas       620 Oct 12 07:13 runtime_log
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas   3819520 Oct 12 07:13 result.tar.gz
[2025-10-12 07:33:05] -rw-r--r--. 1 boincer umatlas      8716 Oct 12 07:13 runtime_log.err
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas       658 Oct 12 07:13 mvyNDm9zvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTehNDmmCMxYn.diag
[2025-10-12 07:33:05] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 07:29 init_data.xml
[2025-10-12 07:33:05] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 07:33 boinc_mmap_file
[2025-10-12 07:33:05] -rw-r--r--. 1 boincer umatlas        28 Oct 12 07:33 wrapper_checkpoint.txt
[2025-10-12 07:33:05] -rw-r--r--. 1 boincer umatlas     21199 Oct 12 07:33 stderr.txt
[2025-10-12 07:33:05] HITS file was successfully produced:
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas 191559545 Oct 12 07:09 shared/HITS.pool.root.1
[2025-10-12 07:33:05]  *** Contents of shared directory: ***
[2025-10-12 07:33:05] total 405844
[2025-10-12 07:33:05] -rw-r--r--. 2 boincer umatlas 219605037 Oct 12 00:04 ATLAS.root_0
[2025-10-12 07:33:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:04 start_atlas.sh
[2025-10-12 07:33:05] -rw-r--r--. 2 boincer umatlas    569679 Oct 12 00:04 input.tar.gz
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas 191559545 Oct 12 07:09 HITS.pool.root.1
[2025-10-12 07:33:05] -rw-------. 1 boincer umatlas   3819520 Oct 12 07:13 result.tar.gz
07:33:07 (4030279): run_atlas exited; CPU time 46557.257619
07:33:07 (4030279): called boinc_finish(0)

</stderr_txt>
]]>

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