Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:55:26 (1747368): wrapper (7.7.26015): starting
14:55:26 (1747368): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 14:55:26] Arguments: --nthreads 3
[2025-10-12 14:55:26] Threads: 3
[2025-10-12 14:55:26] Checking for CVMFS
[2025-10-12 14:55:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:55:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:55:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:55:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:55:26] 2.9.2.0 477430 4336 85372 151620 2 57 32550950 36864001 0 130560 0 3350104 99.991 146862 795 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 14:55:26] CVMFS is ok
[2025-10-12 14:55:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:55:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:55:26] Further information can be found at the LHC@home message board.
[2025-10-12 14:55:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:55:26] Checking for apptainer binary...
[2025-10-12 14:55:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:55:26] Running /usr/bin/apptainer --version
[2025-10-12 14:55:26] apptainer version 1.4.1-1.1
[2025-10-12 14:55:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:55:26] atlasA217a
[2025-10-12 14:55:26] apptainer works
[2025-10-12 14:55:26] Set ATHENA_PROC_NUMBER=3
[2025-10-12 14:55:26] Set ATHENA_CORE_NUMBER=3
[2025-10-12 14:55:26] Starting ATLAS job with PandaID=6838988670
[2025-10-12 14:55:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:18:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:18:07]  lfn=log.46676269._065102.job.log.tgz.1
[2025-10-12 16:18:07]  mtime=0
[2025-10-12 16:18:07]  protocol_id=None
[2025-10-12 16:18:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 16:18:07]  replicas=None
[2025-10-12 16:18:07]  scope=mc23_13p6TeV
[2025-10-12 16:18:07]  status=None
[2025-10-12 16:18:07]  status_code=0
[2025-10-12 16:18:07]  storage_token=
[2025-10-12 16:18:07]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6838988670/log.46676269._065102.job.log.tgz.1
[2025-10-12 16:18:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/2e/log.46676269._065102.job.log.tgz.1
[2025-10-12 16:18:07]  workdir=None
[2025-10-12 16:18:07] ]
[2025-10-12 16:18:07] 2025-10-12 14:17:31,112 | INFO     | transferring file log.46676269._065102.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6838988670/log.46676269._065102.job.log.tgz.1 to /local/data/boinc/
[2025-10-12 16:18:07] 2025-10-12 14:17:31,113 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6838988670/log.46676269._065102.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0651
[2025-10-12 16:18:07] 2025-10-12 14:17:31,125 | INFO     | adding to output.list: log.46676269._065102.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/54/2e/log.46676269._065102.job.log.tg
[2025-10-12 16:18:07] 2025-10-12 14:17:31,126 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 16:18:07] 2025-10-12 14:17:31,126 | INFO     | summary of transferred files:
[2025-10-12 16:18:07] 2025-10-12 14:17:31,126 | INFO     |  -- lfn=log.46676269._065102.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 16:18:07] 2025-10-12 14:17:31,126 | INFO     | stage-out finished correctly
[2025-10-12 16:18:07] 2025-10-12 14:17:31,266 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 16:18:07] 2025-10-12 14:17:31,520 | INFO     | monitor loop #379: job 0:6838988670 is in state 'finished'
[2025-10-12 16:18:07] 2025-10-12 14:17:31,520 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:18:07] 2025-10-12 14:17:32,527 | INFO     | job 6838988670 has state=finished
[2025-10-12 16:18:07] 2025-10-12 14:17:32,527 | INFO     | preparing for final server update for job 6838988670 in state='finished'
[2025-10-12 16:18:07] 2025-10-12 14:17:32,527 | INFO     | this job has now completed (state=finished)
[2025-10-12 16:18:07] 2025-10-12 14:17:32,527 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 16:18:07] 2025-10-12 14:17:32,527 | INFO     | log transfer has been attempted: DONE
[2025-10-12 16:18:07] 2025-10-12 14:17:32,528 | INFO     | job 6838988670 has finished - writing final server update
[2025-10-12 16:18:07] 2025-10-12 14:17:32,528 | INFO     | total number of processed events: 400 (read)
[2025-10-12 16:18:07] 2025-10-12 14:17:32,528 | INFO     | executing command: lscpu
[2025-10-12 16:18:07] 2025-10-12 14:17:32,539 | INFO     | time since job start (4920s) is within the limit (172800.0s)
[2025-10-12 16:18:07] 2025-10-12 14:17:32,544 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 16:18:07] 2025-10-12 14:17:34,023 | INFO     | monitor loop #380: job 0:6838988670 is in state 'finished'
[2025-10-12 16:18:07] 2025-10-12 14:17:34,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:18:07] 2025-10-12 14:17:34,544 | INFO     | time since job start (4922s) is within the limit (172800.0s)
[2025-10-12 16:18:07] 2025-10-12 14:17:36,415 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 16:18:07] 2025-10-12 14:17:36,416 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3579.268
[2025-10-12 16:18:07] 2025-10-12 14:17:36,417 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6838988670/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 16:18:07] 2025-10-12 14:17:36,417 | INFO     | extracted standard info from prmon json
[2025-10-12 16:18:07] 2025-10-12 14:17:36,417 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 16:18:07] 2025-10-12 14:17:36,417 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 16:18:07] 2025-10-12 14:17:36,418 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:18:07] 2025-10-12 14:17:36,418 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:18:07] 2025-10-12 14:17:36,418 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:18:07] 2025-10-12 14:17:36,418 | INFO     | sum of square deviations: 125630262.5
[2025-10-12 16:18:07] 2025-10-12 14:17:36,418 | INFO     | sum of deviations: -7844438716.0
[2025-10-12 16:18:07] 2025-10-12 14:17:36,418 | INFO     | mean x: 1760276282.5
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | mean y: 2425648.027027027
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | -- intersect: 109915269468.59576
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | intersect: 109915269468.59576
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | chi2: 0.12300596544077023
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | -- intersect: 109915269468.59576
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | current memory leak: -62.44 B/s (using 74 data points, chi2=0.12)
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | could have reported an average CPU frequency of 3802 MHz (6 samples)
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | ..............................
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | . Timing measurements:
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | . get job = 0 s
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | . initial setup = 1 s
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | . payload setup = 2 s
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | . stage-in = 0 s
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | . payload execution = 4898 s
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | . stage-out = 0 s
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | . log creation = 0 s
[2025-10-12 16:18:07] 2025-10-12 14:17:36,419 | INFO     | ..............................
[2025-10-12 16:18:07] 2025-10-12 14:17:36,449 | INFO     | 
[2025-10-12 16:18:07] 2025-10-12 14:17:36,449 | INFO     | job summary report
[2025-10-12 16:18:07] 2025-10-12 14:17:36,449 | INFO     | --------------------------------------------------
[2025-10-12 16:18:07] 2025-10-12 14:17:36,449 | INFO     | PanDA job id: 6838988670
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | task id: 46676269
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | errors: (none)
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | pilot state: finished 
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | transexitcode: 0
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | exeerrorcode: 0
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | exeerrordiag: 
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | exitcode: 0
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | exitmsg: OK
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | cpuconsumptiontime: 14091 s
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | nevents: 400
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | neventsw: 0
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | pid: 1757517
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | pgrp: 1757517
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | corecount: 3
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | event service: False
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | sizes: {0: 2348860, 3: 2349122, 11: 2349150, 4904: 2375594, 4906: 2384654, 4911: 2384792}
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | --------------------------------------------------
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | 
[2025-10-12 16:18:07] 2025-10-12 14:17:36,450 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-12 16:18:07] 2025-10-12 14:17:36,461 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,461 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | job 6838988670 has completed (purged errors)
[2025-10-12 16:18:07] 2025-10-12 14:17:36,462 | INFO     | overall cleanup function is called
[2025-10-12 16:18:07] 2025-10-12 14:17:37,469 | INFO     | --- collectZombieJob: --- 10, [1757517]
[2025-10-12 16:18:07] 2025-10-12 14:17:37,469 | INFO     | zombie collector waiting for pid 1757517
[2025-10-12 16:18:07] 2025-10-12 14:17:37,469 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:18:07] 2025-10-12 14:17:37,469 | INFO     | collected zombie processes
[2025-10-12 16:18:07] 2025-10-12 14:17:37,469 | INFO     | will attempt to kill all subprocesses of pid=1757517
[2025-10-12 16:18:07] 2025-10-12 14:17:37,510 | INFO     | process IDs to be killed: [1757517] (in reverse order)
[2025-10-12 16:18:07] 2025-10-12 14:17:37,533 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:18:07] 2025-10-12 14:17:37,533 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:18:07] 2025-10-12 14:17:37,534 | INFO     | did not find any defunct processes belonging to 1757517
[2025-10-12 16:18:07] 2025-10-12 14:17:37,535 | INFO     | did not find any defunct processes belonging to 1757517
[2025-10-12 16:18:07] 2025-10-12 14:17:37,535 | INFO     | ready for new job
[2025-10-12 16:18:07] 2025-10-12 14:17:37,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:18:07] 2025-10-12 14:17:37,536 | INFO     | ***************************************
[2025-10-12 16:18:07] 2025-10-12 14:17:37,536 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:18:07] 2025-10-12 14:17:37,536 | INFO     | ***************************************
[2025-10-12 16:18:07] 2025-10-12 14:17:37,536 | INFO     | 
[2025-10-12 16:18:07] 2025-10-12 14:17:37,536 | INFO     | architecture information:
[2025-10-12 16:18:07] 2025-10-12 14:17:37,536 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:18:07] 2025-10-12 14:17:37,545 | INFO     | cat /etc/os-release:
[2025-10-12 16:18:07] NAME="CentOS Linux"
[2025-10-12 16:18:07] VERSION="7 (Core)"
[2025-10-12 16:18:07] ID="centos"
[2025-10-12 16:18:07] ID_LIKE="rhel fedora"
[2025-10-12 16:18:07] VERSION_ID="7"
[2025-10-12 16:18:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:18:07] ANSI_COLOR="0;31"
[2025-10-12 16:18:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:18:07] HOME_URL="https://www.centos.org/"
[2025-10-12 16:18:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:18:07] 
[2025-10-12 16:18:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:18:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:18:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:18:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:18:07] 
[2025-10-12 16:18:07] 2025-10-12 14:17:37,545 | INFO     | ***************************************
[2025-10-12 16:18:07] 2025-10-12 14:17:38,048 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 16:18:07] 2025-10-12 14:17:38,062 | INFO     | sufficient remaining disk space (327196606464 B)
[2025-10-12 16:18:07] 2025-10-12 14:17:38,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:18:07] 2025-10-12 14:17:38,062 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:18:07] 2025-10-12 14:17:38,062 | INFO     | update_server=False
[2025-10-12 16:18:07] 2025-10-12 14:17:38,062 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:18:07] 2025-10-12 14:17:38,062 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:18:07] 2025-10-12 14:17:38,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:18:07] 2025-10-12 14:17:38,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:18:07] 2025-10-12 14:17:38,062 | INFO     | aborting loop
[2025-10-12 16:18:07] 2025-10-12 14:17:38,123 | INFO     | all data control threads have been joined
[2025-10-12 16:18:07] 2025-10-12 14:17:38,124 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:18:07] 2025-10-12 14:17:38,834 | INFO     | all job control threads have been joined
[2025-10-12 16:18:07] 2025-10-12 14:17:39,063 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:39,067 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:39,068 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:39,129 | INFO     | [data] control thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:39,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:18:07] 2025-10-12 14:17:39,530 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:39,532 | INFO     | all payload control threads have been joined
[2025-10-12 16:18:07] 2025-10-12 14:17:39,639 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:39,834 | INFO     | [job] control thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:40,143 | INFO     | [job] validate thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:40,167 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:40,209 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:40,275 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:40,461 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:40,538 | INFO     | [payload] control thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:41,174 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:42,069 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:48,848 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:18:07] 2025-10-12 14:17:49,854 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:18:07] 2025-10-12 14:17:50,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310189307712)>', '<ExcThread(monitor, started 140309266691840)>']
[2025-10-12 16:18:07] 2025-10-12 14:17:55,852 | INFO     | all workflow threads have been joined
[2025-10-12 16:18:07] 2025-10-12 14:17:55,852 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:18:07] 2025-10-12 14:17:55,852 | INFO     | traces error code: 0
[2025-10-12 16:18:07] 2025-10-12 14:17:55,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:18:07] 2025-10-12 14:18:07,651 | INFO     | PID=1751081 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:18:07] 2025-10-12 14:18:07,651 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:18:07] 2025-10-12 14:18:07,651 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:18:07] 2025-10-12 14:18:07,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:18:07] 2025-10-12 14:18:07,651 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:18:07] 2025-10-12 14:18:07,651 | INFO     | [monitor] control thread has ended
[2025-10-12 16:18:07] 2025-10-12 14:18:07,700 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:18:07] 2025-10-12 14:18:07,702 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:18:07] 2025-10-12 14:18:07,704 [wrapper] pilotpid: 1751081
[2025-10-12 16:18:07] 2025-10-12 14:18:07,707 [wrapper] Pilot exit status: 0
[2025-10-12 16:18:07] 2025-10-12 14:18:07,714 [wrapper] pandaids: 6838988670
[2025-10-12 16:18:07] 2025-10-12 14:18:07,729 [wrapper] cleanup supervisor_pilot 1769322 1751082
[2025-10-12 16:18:07] 2025-10-12 14:18:07,731 [wrapper] Test setup, not cleaning
[2025-10-12 16:18:07] 2025-10-12 14:18:07,734 [wrapper] apfmon messages muted
[2025-10-12 16:18:07] 2025-10-12 14:18:07,736 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:18:07] 2025-10-12 14:18:07,738 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:18:07]  *** Error codes and diagnostics ***
[2025-10-12 16:18:07]     "exeErrorCode": 0,
[2025-10-12 16:18:07]     "exeErrorDiag": "",
[2025-10-12 16:18:07]     "pilotErrorCode": 0,
[2025-10-12 16:18:07]     "pilotErrorDiag": "",
[2025-10-12 16:18:07]  *** Listing of results directory ***
[2025-10-12 16:18:07] total 405292
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc    557409 Oct 11 22:53 pilot3.tar.gz
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc      5112 Oct 11 23:07 queuedata.json
[2025-10-12 16:18:07] -rwx------ 1 boinc boinc     36292 Oct 11 23:08 runpilot2-wrapper.sh
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc       100 Oct 12 14:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:18:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 14:55 run_atlas
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc       105 Oct 12 14:55 job.xml
[2025-10-12 16:18:07] -rw-r--r-- 2 boinc boinc 219785997 Oct 12 14:55 EVNT.46676267._002614.pool.root.1
[2025-10-12 16:18:07] -rw-r--r-- 2 boinc boinc    569680 Oct 12 14:55 input.tar.gz
[2025-10-12 16:18:07] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:55 start_atlas.sh
[2025-10-12 16:18:07] drwxrwx--x 2 boinc boinc      4096 Oct 12 14:55 shared
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:55 boinc_setup_complete
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc      6444 Oct 12 14:55 init_data.xml
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:55 boinc_lockfile
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc      2550 Oct 12 14:55 pandaJob.out
[2025-10-12 16:18:07] -rw------- 1 boinc boinc    975512 Oct 12 14:55 agis_schedconf.cvmfs.json
[2025-10-12 16:18:07] -rw------- 1 boinc boinc   1560580 Oct 12 14:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:18:07] drwx------ 5 boinc boinc      4096 Oct 12 14:55 pilot3
[2025-10-12 16:18:07] -rw------- 1 boinc boinc 189365037 Oct 12 16:17 HITS.46676269._065102.pool.root.1
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc       529 Oct 12 16:17 boinc_task_state.xml
[2025-10-12 16:18:07] -rw------- 1 boinc boinc      1018 Oct 12 16:17 memory_monitor_summary.json
[2025-10-12 16:18:07] -rw------- 1 boinc boinc    259412 Oct 12 16:17 log.46676269._065102.job.log.tgz.1
[2025-10-12 16:18:07] -rw------- 1 boinc boinc      7768 Oct 12 16:17 heartbeat.json
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc        27 Oct 12 16:17 wrapper_checkpoint.txt
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc      8192 Oct 12 16:17 boinc_mmap_file
[2025-10-12 16:18:07] -rw------- 1 boinc boinc       747 Oct 12 16:18 pilotlog.txt
[2025-10-12 16:18:07] -rw------- 1 boinc boinc        95 Oct 12 16:18 pilot_heartbeat.json
[2025-10-12 16:18:07] -rw------- 1 boinc boinc    724070 Oct 12 16:18 log.46676269._065102.job.log.1
[2025-10-12 16:18:07] -rw------- 1 boinc boinc       357 Oct 12 16:18 output.list
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc       620 Oct 12 16:18 runtime_log
[2025-10-12 16:18:07] -rw------- 1 boinc boinc   1003520 Oct 12 16:18 result.tar.gz
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc      8797 Oct 12 16:18 runtime_log.err
[2025-10-12 16:18:07] -rw------- 1 boinc boinc       662 Oct 12 16:18 XIcNDm9zvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMehNDmtttnPm.diag
[2025-10-12 16:18:07] -rw-r--r-- 1 boinc boinc     21590 Oct 12 16:18 stderr.txt
[2025-10-12 16:18:07] HITS file was successfully produced:
[2025-10-12 16:18:07] -rw------- 1 boinc boinc 189365037 Oct 12 16:17 shared/HITS.pool.root.1
[2025-10-12 16:18:07]  *** Contents of shared directory: ***
[2025-10-12 16:18:07] total 401128
[2025-10-12 16:18:07] -rw-r--r-- 2 boinc boinc 219785997 Oct 12 14:55 ATLAS.root_0
[2025-10-12 16:18:07] -rw-r--r-- 2 boinc boinc    569680 Oct 12 14:55 input.tar.gz
[2025-10-12 16:18:07] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:55 start_atlas.sh
[2025-10-12 16:18:07] -rw------- 1 boinc boinc 189365037 Oct 12 16:17 HITS.pool.root.1
[2025-10-12 16:18:07] -rw------- 1 boinc boinc   1003520 Oct 12 16:18 result.tar.gz
16:18:09 (1747368): run_atlas exited; CPU time 14107.217030
16:18:09 (1747368): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN