Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:33:14 (10671): wrapper (7.7.26015): starting
22:33:14 (10671): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 22:33:14] Arguments: --nthreads 8
[2025-10-11 22:33:14] Threads: 8
[2025-10-11 22:33:14] Checking for CVMFS
[2025-10-11 22:33:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:33:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:33:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:33:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:33:14] 2.11.2.0 3213 627223 246900 151604 2 59 20133851 20275201 917 130560 1 357132099 99.992 26040575 20162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 22:33:14] CVMFS is ok
[2025-10-11 22:33:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:33:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:33:14] Further information can be found at the LHC@home message board.
[2025-10-11 22:33:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:33:14] Checking for apptainer binary...
[2025-10-11 22:33:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:33:14] Running /usr/bin/apptainer --version
[2025-10-11 22:33:14] apptainer version 1.3.2-1.el7
[2025-10-11 22:33:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:33:15] c-205-38.aglt2.org
[2025-10-11 22:33:15] apptainer works
[2025-10-11 22:33:15] Set ATHENA_PROC_NUMBER=8
[2025-10-11 22:33:15] Set ATHENA_CORE_NUMBER=8
[2025-10-11 22:33:15] Starting ATLAS job with PandaID=6838775000
[2025-10-11 22:33:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:28:33]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:28:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838775000/log.46676269._062688.job.log.tgz.1
[2025-10-11 23:28:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/43/log.46676269._062688.job.log.tgz.1
[2025-10-11 23:28:33]  workdir=None
[2025-10-11 23:28:33] ]
[2025-10-11 23:28:33] 2025-10-12 03:27:23,998 | INFO     | transferring file log.46676269._062688.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838775000/log.46676269._062688.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 23:28:33] 2025-10-12 03:27:23,998 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838775000/log.46676269._062688.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._062688.job
[2025-10-11 23:28:33] 2025-10-12 03:27:24,016 | INFO     | adding to output.list: log.46676269._062688.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1e/43/log.46676269._062688.job.log.tg
[2025-10-11 23:28:33] 2025-10-12 03:27:24,017 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 23:28:33] 2025-10-12 03:27:24,017 | INFO     | summary of transferred files:
[2025-10-11 23:28:33] 2025-10-12 03:27:24,017 | INFO     |  -- lfn=log.46676269._062688.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 23:28:33] 2025-10-12 03:27:24,017 | INFO     | stage-out finished correctly
[2025-10-11 23:28:33] 2025-10-12 03:27:24,202 | INFO     | monitor loop #248: job 0:6838775000 is in state 'finished'
[2025-10-11 23:28:33] 2025-10-12 03:27:24,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:28:33] 2025-10-12 03:27:24,551 | INFO     | time since job start (3241s) is within the limit (172800.0s)
[2025-10-11 23:28:33] 2025-10-12 03:27:25,949 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 23:28:33] 2025-10-12 03:27:26,556 | INFO     | time since job start (3243s) is within the limit (172800.0s)
[2025-10-11 23:28:33] 2025-10-12 03:27:26,706 | INFO     | monitor loop #249: job 0:6838775000 is in state 'finished'
[2025-10-11 23:28:33] 2025-10-12 03:27:26,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:28:33] 2025-10-12 03:27:28,562 | INFO     | time since job start (3245s) is within the limit (172800.0s)
[2025-10-11 23:28:33] 2025-10-12 03:27:28,992 | INFO     | job 6838775000 has state=finished
[2025-10-11 23:28:33] 2025-10-12 03:27:28,992 | INFO     | preparing for final server update for job 6838775000 in state='finished'
[2025-10-11 23:28:33] 2025-10-12 03:27:28,993 | INFO     | this job has now completed (state=finished)
[2025-10-11 23:28:33] 2025-10-12 03:27:28,993 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 23:28:33] 2025-10-12 03:27:28,993 | INFO     | log transfer has been attempted: DONE
[2025-10-11 23:28:33] 2025-10-12 03:27:28,993 | INFO     | job 6838775000 has finished - writing final server update
[2025-10-11 23:28:33] 2025-10-12 03:27:28,994 | INFO     | total number of processed events: 400 (read)
[2025-10-11 23:28:33] 2025-10-12 03:27:28,994 | INFO     | executing command: lscpu
[2025-10-11 23:28:33] 2025-10-12 03:27:29,021 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 23:28:33] 2025-10-12 03:27:29,209 | INFO     | monitor loop #250: job 0:6838775000 is in state 'finished'
[2025-10-11 23:28:33] 2025-10-12 03:27:29,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:28:33] 2025-10-12 03:27:30,567 | INFO     | time since job start (3247s) is within the limit (172800.0s)
[2025-10-11 23:28:33] 2025-10-12 03:27:31,712 | INFO     | monitor loop #251: job 0:6838775000 is in state 'finished'
[2025-10-11 23:28:33] 2025-10-12 03:27:31,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:28:33] 2025-10-12 03:27:32,216 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 23:28:33] 2025-10-12 03:27:32,220 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2955.6270000000004
[2025-10-11 23:28:33] 2025-10-12 03:27:32,224 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838775000/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:28:33] 2025-10-12 03:27:32,225 | INFO     | extracted standard info from prmon json
[2025-10-11 23:28:33] 2025-10-12 03:27:32,225 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:28:33] 2025-10-12 03:27:32,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:28:33] 2025-10-12 03:27:32,226 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:28:33] 2025-10-12 03:27:32,226 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:28:33] 2025-10-12 03:27:32,227 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:28:33] 2025-10-12 03:27:32,228 | INFO     | sum of square deviations: 30168007.5
[2025-10-11 23:28:33] 2025-10-12 03:27:32,228 | INFO     | sum of deviations: -3069206948.0
[2025-10-11 23:28:33] 2025-10-12 03:27:32,228 | INFO     | mean x: 1760238100.5
[2025-10-11 23:28:33] 2025-10-12 03:27:32,228 | INFO     | mean y: 2706007.652173913
[2025-10-11 23:28:33] 2025-10-12 03:27:32,229 | INFO     | -- intersect: 179084304558.33276
[2025-10-11 23:28:33] 2025-10-12 03:27:32,229 | INFO     | intersect: 179084304558.33276
[2025-10-11 23:28:33] 2025-10-12 03:27:32,229 | INFO     | chi2: 0.012913538908968548
[2025-10-11 23:28:33] 2025-10-12 03:27:32,229 | INFO     | -- intersect: 179084304558.33276
[2025-10-11 23:28:33] 2025-10-12 03:27:32,229 | INFO     | current memory leak: -101.74 B/s (using 46 data points, chi2=0.01)
[2025-10-11 23:28:33] 2025-10-12 03:27:32,230 | INFO     | could have reported an average CPU frequency of 2890 MHz (5 samples)
[2025-10-11 23:28:33] 2025-10-12 03:27:32,230 | INFO     | ..............................
[2025-10-11 23:28:33] 2025-10-12 03:27:32,230 | INFO     | . Timing measurements:
[2025-10-11 23:28:33] 2025-10-12 03:27:32,230 | INFO     | . get job = 0 s
[2025-10-11 23:28:33] 2025-10-12 03:27:32,230 | INFO     | . initial setup = 2 s
[2025-10-11 23:28:33] 2025-10-12 03:27:32,230 | INFO     | . payload setup = 3 s
[2025-10-11 23:28:33] 2025-10-12 03:27:32,230 | INFO     | . stage-in = 0 s
[2025-10-11 23:28:33] 2025-10-12 03:27:32,230 | INFO     | . payload execution = 3219 s
[2025-10-11 23:28:33] 2025-10-12 03:27:32,231 | INFO     | . stage-out = 0 s
[2025-10-11 23:28:33] 2025-10-12 03:27:32,231 | INFO     | . log creation = 0 s
[2025-10-11 23:28:33] 2025-10-12 03:27:32,231 | INFO     | ..............................
[2025-10-11 23:28:33] 2025-10-12 03:27:32,312 | INFO     | 
[2025-10-11 23:28:33] 2025-10-12 03:27:32,312 | INFO     | job summary report
[2025-10-11 23:28:33] 2025-10-12 03:27:32,312 | INFO     | --------------------------------------------------
[2025-10-11 23:28:33] 2025-10-12 03:27:32,312 | INFO     | PanDA job id: 6838775000
[2025-10-11 23:28:33] 2025-10-12 03:27:32,312 | INFO     | task id: 46676269
[2025-10-11 23:28:33] 2025-10-12 03:27:32,312 | INFO     | errors: (none)
[2025-10-11 23:28:33] 2025-10-12 03:27:32,312 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | pilot state: finished 
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | transexitcode: 0
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | exeerrorcode: 0
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | exeerrordiag: 
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | exitcode: 0
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | exitmsg: OK
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | cpuconsumptiontime: 24155 s
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | nevents: 400
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | neventsw: 0
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | pid: 20729
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | pgrp: 20729
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | corecount: 8
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | event service: False
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 3226: 2374693, 3228: 2383691, 3230: 2383747, 3236: 2384101}
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | --------------------------------------------------
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | 
[2025-10-11 23:28:33] 2025-10-12 03:27:32,313 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 23:28:33] 2025-10-12 03:27:32,332 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,332 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,332 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,332 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,332 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,332 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,332 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,333 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,333 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,333 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,333 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,333 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,333 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,333 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,333 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,333 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:28:33] 2025-10-12 03:27:32,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,333 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:28:33] 2025-10-12 03:27:32,334 | INFO     | job 6838775000 has completed (purged errors)
[2025-10-11 23:28:33] 2025-10-12 03:27:32,334 | INFO     | overall cleanup function is called
[2025-10-11 23:28:33] 2025-10-12 03:27:33,341 | INFO     | --- collectZombieJob: --- 10, [20729]
[2025-10-11 23:28:33] 2025-10-12 03:27:33,341 | INFO     | zombie collector waiting for pid 20729
[2025-10-11 23:28:33] 2025-10-12 03:27:33,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:28:33] 2025-10-12 03:27:33,342 | INFO     | collected zombie processes
[2025-10-11 23:28:33] 2025-10-12 03:27:33,342 | INFO     | will attempt to kill all subprocesses of pid=20729
[2025-10-11 23:28:33] 2025-10-12 03:27:33,456 | INFO     | process IDs to be killed: [20729] (in reverse order)
[2025-10-11 23:28:33] 2025-10-12 03:27:33,508 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:28:33] 2025-10-12 03:27:33,509 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:28:33] 2025-10-12 03:27:33,511 | INFO     | did not find any defunct processes belonging to 20729
[2025-10-11 23:28:33] 2025-10-12 03:27:33,513 | INFO     | did not find any defunct processes belonging to 20729
[2025-10-11 23:28:33] 2025-10-12 03:27:33,513 | INFO     | ready for new job
[2025-10-11 23:28:33] 2025-10-12 03:27:33,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:28:33] 2025-10-12 03:27:33,515 | INFO     | ***************************************
[2025-10-11 23:28:33] 2025-10-12 03:27:33,515 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:28:33] 2025-10-12 03:27:33,515 | INFO     | ***************************************
[2025-10-11 23:28:33] 2025-10-12 03:27:33,515 | INFO     | 
[2025-10-11 23:28:33] 2025-10-12 03:27:33,516 | INFO     | architecture information:
[2025-10-11 23:28:33] 2025-10-12 03:27:33,516 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:28:33] 2025-10-12 03:27:33,530 | INFO     | cat /etc/os-release:
[2025-10-11 23:28:33] NAME="CentOS Linux"
[2025-10-11 23:28:33] VERSION="7 (Core)"
[2025-10-11 23:28:33] ID="centos"
[2025-10-11 23:28:33] ID_LIKE="rhel fedora"
[2025-10-11 23:28:33] VERSION_ID="7"
[2025-10-11 23:28:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:28:33] ANSI_COLOR="0;31"
[2025-10-11 23:28:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:28:33] HOME_URL="https://www.centos.org/"
[2025-10-11 23:28:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:28:33] 
[2025-10-11 23:28:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:28:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:28:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:28:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:28:33] 
[2025-10-11 23:28:33] 2025-10-12 03:27:33,530 | INFO     | ***************************************
[2025-10-11 23:28:33] 2025-10-12 03:27:34,033 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 23:28:33] 2025-10-12 03:27:34,051 | INFO     | sufficient remaining disk space (32722911232 B)
[2025-10-11 23:28:33] 2025-10-12 03:27:34,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:28:33] 2025-10-12 03:27:34,051 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:28:33] 2025-10-12 03:27:34,051 | INFO     | update_server=False
[2025-10-11 23:28:33] 2025-10-12 03:27:34,052 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:28:33] 2025-10-12 03:27:34,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:28:33] 2025-10-12 03:27:34,066 | INFO     | all job control threads have been joined
[2025-10-11 23:28:33] 2025-10-12 03:27:34,215 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 23:28:33] 2025-10-12 03:27:34,215 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 23:28:33] 2025-10-12 03:27:34,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:28:33] 2025-10-12 03:27:34,216 | INFO     | will abort loop
[2025-10-11 23:28:33] 2025-10-12 03:27:34,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:28:33] 2025-10-12 03:27:34,601 | INFO     | all data control threads have been joined
[2025-10-11 23:28:33] 2025-10-12 03:27:35,056 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:35,057 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:35,072 | INFO     | [job] control thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:35,079 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:35,221 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:35,223 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:35,254 | INFO     | all payload control threads have been joined
[2025-10-11 23:28:33] 2025-10-12 03:27:35,607 | INFO     | [data] control thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:35,624 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:36,024 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:36,218 | INFO     | [job] validate thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:36,259 | INFO     | [payload] control thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:36,428 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:36,510 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:36,542 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:28:33] 2025-10-12 03:27:36,586 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:40,548 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:27:44,837 | INFO     | job.realtimelogging is not enabled
[2025-10-11 23:28:33] 2025-10-12 03:27:45,842 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:28:33] 2025-10-12 03:28:03,736 | INFO     | PID=14346 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 23:28:33] 2025-10-12 03:28:03,736 | INFO     | .. there are 2 such processes running
[2025-10-11 23:28:33] 2025-10-12 03:28:03,738 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:28:33] 2025-10-12 03:28:03,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:28:33] 2025-10-12 03:28:03,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:28:33] 2025-10-12 03:28:27,969 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:28:33] 2025-10-12 03:28:28,279 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139848452048704)>', '<ExcThread(monitor, started 139847868073728)>']
[2025-10-11 23:28:33] 2025-10-12 03:28:28,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:28:33] 2025-10-12 03:28:28,864 | INFO     | [monitor] control thread has ended
[2025-10-11 23:28:33] 2025-10-12 03:28:33,304 | INFO     | all workflow threads have been joined
[2025-10-11 23:28:33] 2025-10-12 03:28:33,304 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:28:33] 2025-10-12 03:28:33,305 | INFO     | traces error code: 0
[2025-10-11 23:28:33] 2025-10-12 03:28:33,305 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:28:33] 2025-10-12 03:28:33,404 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:28:33] 2025-10-12 03:28:33,406 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:28:33] 2025-10-12 03:28:33,409 [wrapper] pilotpid: 14346
[2025-10-11 23:28:33] 2025-10-12 03:28:33,412 [wrapper] Pilot exit status: 0
[2025-10-11 23:28:33] 2025-10-12 03:28:33,421 [wrapper] pandaids: 6838775000
[2025-10-11 23:28:33] 2025-10-12 03:28:33,442 [wrapper] cleanup supervisor_pilot 27436 14347
[2025-10-11 23:28:33] 2025-10-12 03:28:33,445 [wrapper] Test setup, not cleaning
[2025-10-11 23:28:33] 2025-10-12 03:28:33,448 [wrapper] apfmon messages muted
[2025-10-11 23:28:33] 2025-10-12 03:28:33,450 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:28:33] 2025-10-12 03:28:33,453 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:28:33]  *** Error codes and diagnostics ***
[2025-10-11 23:28:33]     "exeErrorCode": 0,
[2025-10-11 23:28:33]     "exeErrorDiag": "",
[2025-10-11 23:28:33]     "pilotErrorCode": 0,
[2025-10-11 23:28:33]     "pilotErrorDiag": "",
[2025-10-11 23:28:33]  *** Listing of results directory ***
[2025-10-11 23:28:33] total 409908
[2025-10-11 23:28:33] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-11 23:28:33] -rwx------ 1 boincer umatlas     36292 Oct 11 14:27 runpilot2-wrapper.sh
[2025-10-11 23:28:33] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 14:27 queuedata.json
[2025-10-11 23:28:33] -rw-r--r-- 1 boincer umatlas       100 Oct 11 22:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:28:33] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 22:33 run_atlas
[2025-10-11 23:28:33] -rw-r--r-- 1 boincer umatlas       105 Oct 11 22:33 job.xml
[2025-10-11 23:28:33] -rw-r--r-- 2 boincer umatlas 220776735 Oct 11 22:33 EVNT.46676267._002518.pool.root.1
[2025-10-11 23:28:33] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 22:33 start_atlas.sh
[2025-10-11 23:28:33] drwxrwx--x 2 boincer umatlas      4096 Oct 11 22:33 shared
[2025-10-11 23:28:33] -rw-r--r-- 2 boincer umatlas    569677 Oct 11 22:33 input.tar.gz
[2025-10-11 23:28:33] -rw-r--r-- 1 boincer umatlas         0 Oct 11 22:33 boinc_lockfile
[2025-10-11 23:28:33] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 22:33 pandaJob.out
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas    975496 Oct 11 22:33 agis_schedconf.cvmfs.json
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas   1560580 Oct 11 22:33 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:28:33] drwx------ 5 boincer umatlas      4096 Oct 11 22:33 pilot3
[2025-10-11 23:28:33] -rw-r--r-- 1 boincer umatlas      6134 Oct 11 23:20 init_data.xml
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas 193443786 Oct 11 23:26 HITS.46676269._062688.pool.root.1
[2025-10-11 23:28:33] -rw-r--r-- 1 boincer umatlas       529 Oct 11 23:27 boinc_task_state.xml
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas      1046 Oct 11 23:27 memory_monitor_summary.json
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas    309040 Oct 11 23:27 log.46676269._062688.job.log.tgz.1
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas      7840 Oct 11 23:27 heartbeat.json
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas        95 Oct 11 23:28 pilot_heartbeat.json
[2025-10-11 23:28:33] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 23:28 boinc_mmap_file
[2025-10-11 23:28:33] -rw-r--r-- 1 boincer umatlas        27 Oct 11 23:28 wrapper_checkpoint.txt
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas      5079 Oct 11 23:28 pilotlog.txt
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas    502425 Oct 11 23:28 log.46676269._062688.job.log.1
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas       357 Oct 11 23:28 output.list
[2025-10-11 23:28:33] -rw-r--r-- 1 boincer umatlas       620 Oct 11 23:28 runtime_log
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas    829440 Oct 11 23:28 result.tar.gz
[2025-10-11 23:28:33] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 23:28 runtime_log.err
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas       656 Oct 11 23:28 qdOLDmDUtR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkMSMDmRum9Lm.diag
[2025-10-11 23:28:33] -rw-r--r-- 1 boincer umatlas     22210 Oct 11 23:28 stderr.txt
[2025-10-11 23:28:33] HITS file was successfully produced:
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas 193443786 Oct 11 23:26 shared/HITS.pool.root.1
[2025-10-11 23:28:33]  *** Contents of shared directory: ***
[2025-10-11 23:28:33] total 405908
[2025-10-11 23:28:33] -rw-r--r-- 2 boincer umatlas 220776735 Oct 11 22:33 ATLAS.root_0
[2025-10-11 23:28:33] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 22:33 start_atlas.sh
[2025-10-11 23:28:33] -rw-r--r-- 2 boincer umatlas    569677 Oct 11 22:33 input.tar.gz
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas 193443786 Oct 11 23:26 HITS.pool.root.1
[2025-10-11 23:28:33] -rw------- 1 boincer umatlas    829440 Oct 11 23:28 result.tar.gz
23:28:34 (10671): run_atlas exited; CPU time 24125.541271
23:28:34 (10671): called boinc_finish(0)

</stderr_txt>
]]>

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