Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:27:55 (5724): wrapper (7.7.26015): starting
22:27:55 (5724): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 22:27:55] Arguments: --nthreads 12
[2025-10-11 22:27:55] Threads: 12
[2025-10-11 22:27:55] Checking for CVMFS
[2025-10-11 22:27:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:27:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:27:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:27:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:27:56] 2.11.2.0 2916 222235 98424 151604 1 59 18675898 20275201 1 130560 1 107625710 99.984 13390683 12491 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 22:27:56] CVMFS is ok
[2025-10-11 22:27:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:27:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:27:56] Further information can be found at the LHC@home message board.
[2025-10-11 22:27:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:27:56] Checking for apptainer binary...
[2025-10-11 22:27:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:27:56] Running /usr/bin/apptainer --version
[2025-10-11 22:27:56] apptainer version 1.3.2-1.el7
[2025-10-11 22:27:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:27:57] c-205-23.aglt2.org
[2025-10-11 22:27:57] apptainer works
[2025-10-11 22:27:57] Set ATHENA_PROC_NUMBER=12
[2025-10-11 22:27:57] Set ATHENA_CORE_NUMBER=12
[2025-10-11 22:27:57] Starting ATLAS job with PandaID=6838988611
[2025-10-11 22:27:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:43:24]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:43:24]  status=None
[2025-10-11 23:43:24]  status_code=0
[2025-10-11 23:43:24]  storage_token=
[2025-10-11 23:43:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838988611/log.46676269._065043.job.log.tgz.1
[2025-10-11 23:43:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/59/log.46676269._065043.job.log.tgz.1
[2025-10-11 23:43:24]  workdir=None
[2025-10-11 23:43:24] ]
[2025-10-11 23:43:24] 2025-10-12 03:42:33,841 | INFO     | transferring file log.46676269._065043.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838988611/log.46676269._065043.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 23:43:24] 2025-10-12 03:42:33,841 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838988611/log.46676269._065043.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._065043.job
[2025-10-11 23:43:24] 2025-10-12 03:42:33,863 | INFO     | adding to output.list: log.46676269._065043.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/85/59/log.46676269._065043.job.log.tg
[2025-10-11 23:43:24] 2025-10-12 03:42:33,864 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 23:43:24] 2025-10-12 03:42:33,864 | INFO     | summary of transferred files:
[2025-10-11 23:43:24] 2025-10-12 03:42:33,864 | INFO     |  -- lfn=log.46676269._065043.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 23:43:24] 2025-10-12 03:42:33,865 | INFO     | stage-out finished correctly
[2025-10-11 23:43:24] 2025-10-12 03:42:34,695 | INFO     | monitor loop #332: job 0:6838988611 is in state 'finished'
[2025-10-11 23:43:24] 2025-10-12 03:42:34,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:43:24] 2025-10-12 03:42:35,080 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 23:43:24] 2025-10-12 03:42:35,164 | INFO     | job 6838988611 has state=finished
[2025-10-11 23:43:24] 2025-10-12 03:42:35,164 | INFO     | preparing for final server update for job 6838988611 in state='finished'
[2025-10-11 23:43:24] 2025-10-12 03:42:35,165 | INFO     | this job has now completed (state=finished)
[2025-10-11 23:43:24] 2025-10-12 03:42:35,165 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 23:43:24] 2025-10-12 03:42:35,165 | INFO     | log transfer has been attempted: DONE
[2025-10-11 23:43:24] 2025-10-12 03:42:35,165 | INFO     | job 6838988611 has finished - writing final server update
[2025-10-11 23:43:24] 2025-10-12 03:42:35,166 | INFO     | total number of processed events: 400 (read)
[2025-10-11 23:43:24] 2025-10-12 03:42:35,167 | INFO     | executing command: lscpu
[2025-10-11 23:43:24] 2025-10-12 03:42:35,193 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 23:43:24] 2025-10-12 03:42:35,309 | INFO     | time since job start (4463s) is within the limit (172800.0s)
[2025-10-11 23:43:24] 2025-10-12 03:42:37,198 | INFO     | monitor loop #333: job 0:6838988611 is in state 'finished'
[2025-10-11 23:43:24] 2025-10-12 03:42:37,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:43:24] 2025-10-12 03:42:37,315 | INFO     | time since job start (4465s) is within the limit (172800.0s)
[2025-10-11 23:43:24] 2025-10-12 03:42:39,321 | INFO     | time since job start (4467s) is within the limit (172800.0s)
[2025-10-11 23:43:24] 2025-10-12 03:42:39,702 | INFO     | monitor loop #334: job 0:6838988611 is in state 'finished'
[2025-10-11 23:43:24] 2025-10-12 03:42:39,702 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:43:24] 2025-10-12 03:42:39,848 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 23:43:24] 2025-10-12 03:42:39,851 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2025-10-11 23:43:24] 2025-10-12 03:42:39,854 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838988611/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:43:24] 2025-10-12 03:42:39,855 | INFO     | extracted standard info from prmon json
[2025-10-11 23:43:24] 2025-10-12 03:42:39,855 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:43:24] 2025-10-12 03:42:39,855 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:43:24] 2025-10-12 03:42:39,855 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:43:24] 2025-10-12 03:42:39,855 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:43:24] 2025-10-12 03:42:39,858 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:43:24] 2025-10-12 03:42:39,858 | INFO     | sum of square deviations: 89127252.5
[2025-10-11 23:43:24] 2025-10-12 03:42:39,858 | INFO     | sum of deviations: -6709069750.000001
[2025-10-11 23:43:24] 2025-10-12 03:42:39,859 | INFO     | mean x: 1760238408.5
[2025-10-11 23:43:24] 2025-10-12 03:42:39,859 | INFO     | mean y: 2878240.696969697
[2025-10-11 23:43:24] 2025-10-12 03:42:39,859 | INFO     | -- intersect: 132505136842.86238
[2025-10-11 23:43:24] 2025-10-12 03:42:39,859 | INFO     | intersect: 132505136842.86238
[2025-10-11 23:43:24] 2025-10-12 03:42:39,859 | INFO     | chi2: 0.070473818155359
[2025-10-11 23:43:24] 2025-10-12 03:42:39,859 | INFO     | -- intersect: 132505136842.86238
[2025-10-11 23:43:24] 2025-10-12 03:42:39,860 | INFO     | current memory leak: -75.28 B/s (using 66 data points, chi2=0.07)
[2025-10-11 23:43:24] 2025-10-12 03:42:39,860 | INFO     | could have reported an average CPU frequency of 2052 MHz (6 samples)
[2025-10-11 23:43:24] 2025-10-12 03:42:39,860 | INFO     | ..............................
[2025-10-11 23:43:24] 2025-10-12 03:42:39,860 | INFO     | . Timing measurements:
[2025-10-11 23:43:24] 2025-10-12 03:42:39,860 | INFO     | . get job = 0 s
[2025-10-11 23:43:24] 2025-10-12 03:42:39,860 | INFO     | . initial setup = 2 s
[2025-10-11 23:43:24] 2025-10-12 03:42:39,860 | INFO     | . payload setup = 7 s
[2025-10-11 23:43:24] 2025-10-12 03:42:39,861 | INFO     | . stage-in = 0 s
[2025-10-11 23:43:24] 2025-10-12 03:42:39,861 | INFO     | . payload execution = 4432 s
[2025-10-11 23:43:24] 2025-10-12 03:42:39,861 | INFO     | . stage-out = 0 s
[2025-10-11 23:43:24] 2025-10-12 03:42:39,861 | INFO     | . log creation = 0 s
[2025-10-11 23:43:24] 2025-10-12 03:42:39,861 | INFO     | ..............................
[2025-10-11 23:43:24] 2025-10-12 03:42:40,064 | INFO     | 
[2025-10-11 23:43:24] 2025-10-12 03:42:40,065 | INFO     | job summary report
[2025-10-11 23:43:24] 2025-10-12 03:42:40,065 | INFO     | --------------------------------------------------
[2025-10-11 23:43:24] 2025-10-12 03:42:40,065 | INFO     | PanDA job id: 6838988611
[2025-10-11 23:43:24] 2025-10-12 03:42:40,065 | INFO     | task id: 46676269
[2025-10-11 23:43:24] 2025-10-12 03:42:40,065 | INFO     | errors: (none)
[2025-10-11 23:43:24] 2025-10-12 03:42:40,066 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:43:24] 2025-10-12 03:42:40,066 | INFO     | pilot state: finished 
[2025-10-11 23:43:24] 2025-10-12 03:42:40,066 | INFO     | transexitcode: 0
[2025-10-11 23:43:24] 2025-10-12 03:42:40,066 | INFO     | exeerrorcode: 0
[2025-10-11 23:43:24] 2025-10-12 03:42:40,066 | INFO     | exeerrordiag: 
[2025-10-11 23:43:24] 2025-10-12 03:42:40,066 | INFO     | exitcode: 0
[2025-10-11 23:43:24] 2025-10-12 03:42:40,066 | INFO     | exitmsg: OK
[2025-10-11 23:43:24] 2025-10-12 03:42:40,067 | INFO     | cpuconsumptiontime: 47523 s
[2025-10-11 23:43:24] 2025-10-12 03:42:40,067 | INFO     | nevents: 400
[2025-10-11 23:43:24] 2025-10-12 03:42:40,067 | INFO     | neventsw: 0
[2025-10-11 23:43:24] 2025-10-12 03:42:40,067 | INFO     | pid: 15856
[2025-10-11 23:43:24] 2025-10-12 03:42:40,067 | INFO     | pgrp: 15856
[2025-10-11 23:43:24] 2025-10-12 03:42:40,067 | INFO     | corecount: 12
[2025-10-11 23:43:24] 2025-10-12 03:42:40,068 | INFO     | event service: False
[2025-10-11 23:43:24] 2025-10-12 03:42:40,068 | INFO     | sizes: {0: 2348857, 1: 2348857, 5: 2349147, 11: 2349203, 4443: 2375280, 4445: 2384278, 4446: 2384462, 4451: 2384656}
[2025-10-11 23:43:24] 2025-10-12 03:42:40,068 | INFO     | --------------------------------------------------
[2025-10-11 23:43:24] 2025-10-12 03:42:40,068 | INFO     | 
[2025-10-11 23:43:24] 2025-10-12 03:42:40,068 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 23:43:24] 2025-10-12 03:42:40,091 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,092 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,092 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,092 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,092 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,092 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,094 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:43:24] 2025-10-12 03:42:40,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,095 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:43:24] 2025-10-12 03:42:40,095 | INFO     | job 6838988611 has completed (purged errors)
[2025-10-11 23:43:24] 2025-10-12 03:42:40,095 | INFO     | overall cleanup function is called
[2025-10-11 23:43:24] 2025-10-12 03:42:41,103 | INFO     | --- collectZombieJob: --- 10, [15856]
[2025-10-11 23:43:24] 2025-10-12 03:42:41,104 | INFO     | zombie collector waiting for pid 15856
[2025-10-11 23:43:24] 2025-10-12 03:42:41,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:43:24] 2025-10-12 03:42:41,104 | INFO     | collected zombie processes
[2025-10-11 23:43:24] 2025-10-12 03:42:41,104 | INFO     | will attempt to kill all subprocesses of pid=15856
[2025-10-11 23:43:24] 2025-10-12 03:42:41,195 | INFO     | process IDs to be killed: [15856] (in reverse order)
[2025-10-11 23:43:24] 2025-10-12 03:42:41,247 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:43:24] 2025-10-12 03:42:41,247 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:43:24] 2025-10-12 03:42:41,251 | INFO     | did not find any defunct processes belonging to 15856
[2025-10-11 23:43:24] 2025-10-12 03:42:41,253 | INFO     | did not find any defunct processes belonging to 15856
[2025-10-11 23:43:24] 2025-10-12 03:42:41,253 | INFO     | ready for new job
[2025-10-11 23:43:24] 2025-10-12 03:42:41,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:43:24] 2025-10-12 03:42:41,254 | INFO     | ***************************************
[2025-10-11 23:43:24] 2025-10-12 03:42:41,254 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:43:24] 2025-10-12 03:42:41,254 | INFO     | ***************************************
[2025-10-11 23:43:24] 2025-10-12 03:42:41,254 | INFO     | 
[2025-10-11 23:43:24] 2025-10-12 03:42:41,255 | INFO     | architecture information:
[2025-10-11 23:43:24] 2025-10-12 03:42:41,255 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:43:24] 2025-10-12 03:42:41,270 | INFO     | cat /etc/os-release:
[2025-10-11 23:43:24] NAME="CentOS Linux"
[2025-10-11 23:43:24] VERSION="7 (Core)"
[2025-10-11 23:43:24] ID="centos"
[2025-10-11 23:43:24] ID_LIKE="rhel fedora"
[2025-10-11 23:43:24] VERSION_ID="7"
[2025-10-11 23:43:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:43:24] ANSI_COLOR="0;31"
[2025-10-11 23:43:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:43:24] HOME_URL="https://www.centos.org/"
[2025-10-11 23:43:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:43:24] 
[2025-10-11 23:43:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:43:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:43:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:43:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:43:24] 
[2025-10-11 23:43:24] 2025-10-12 03:42:41,271 | INFO     | ***************************************
[2025-10-11 23:43:24] 2025-10-12 03:42:41,774 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 23:43:24] 2025-10-12 03:42:41,790 | INFO     | sufficient remaining disk space (29364322304 B)
[2025-10-11 23:43:24] 2025-10-12 03:42:41,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:43:24] 2025-10-12 03:42:41,791 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:43:24] 2025-10-12 03:42:41,791 | INFO     | update_server=False
[2025-10-11 23:43:24] 2025-10-12 03:42:41,791 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:43:24] 2025-10-12 03:42:41,792 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:43:24] 2025-10-12 03:42:41,792 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:43:24] 2025-10-12 03:42:41,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:43:24] 2025-10-12 03:42:42,080 | INFO     | all payload control threads have been joined
[2025-10-11 23:43:24] 2025-10-12 03:42:42,203 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 23:43:24] 2025-10-12 03:42:42,204 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 23:43:24] 2025-10-12 03:42:42,204 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:43:24] 2025-10-12 03:42:42,204 | INFO     | will abort loop
[2025-10-11 23:43:24] 2025-10-12 03:42:42,797 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:42,797 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:42,825 | INFO     | all data control threads have been joined
[2025-10-11 23:43:24] 2025-10-12 03:42:43,002 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:43,086 | INFO     | [payload] control thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:43,145 | INFO     | all job control threads have been joined
[2025-10-11 23:43:24] 2025-10-12 03:42:43,209 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:43,251 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:43,351 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:43,501 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:43,830 | INFO     | [data] control thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:43,966 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:44,140 | INFO     | [job] validate thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:44,151 | INFO     | [job] control thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:44,243 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:44,286 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:45,798 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:42:52,650 | INFO     | job.realtimelogging is not enabled
[2025-10-11 23:43:24] 2025-10-12 03:42:53,651 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:43:24] 2025-10-12 03:43:10,037 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-11 23:43:24] 2025-10-12 03:43:12,512 | INFO     | PID=9453 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 23:43:24] 2025-10-12 03:43:12,513 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:43:24] 2025-10-12 03:43:12,513 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:43:24] 2025-10-12 03:43:12,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:43:24] 2025-10-12 03:43:19,203 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:43:24] 2025-10-12 03:43:19,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037810902848)>', '<ExcThread(monitor, started 140037358327552)>']
[2025-10-11 23:43:24] 2025-10-12 03:43:19,537 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:43:24] 2025-10-12 03:43:19,538 | INFO     | [monitor] control thread has ended
[2025-10-11 23:43:24] 2025-10-12 03:43:24,355 | INFO     | all workflow threads have been joined
[2025-10-11 23:43:24] 2025-10-12 03:43:24,355 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:43:24] 2025-10-12 03:43:24,359 | INFO     | traces error code: 0
[2025-10-11 23:43:24] 2025-10-12 03:43:24,360 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:43:24] 2025-10-12 03:43:24,445 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:43:24] 2025-10-12 03:43:24,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:43:24] 2025-10-12 03:43:24,453 [wrapper] pilotpid: 9453
[2025-10-11 23:43:24] 2025-10-12 03:43:24,456 [wrapper] Pilot exit status: 0
[2025-10-11 23:43:24] 2025-10-12 03:43:24,473 [wrapper] pandaids: 6838988611
[2025-10-11 23:43:24] 2025-10-12 03:43:24,512 [wrapper] cleanup supervisor_pilot  6946 9454
[2025-10-11 23:43:24] 2025-10-12 03:43:24,516 [wrapper] Test setup, not cleaning
[2025-10-11 23:43:24] 2025-10-12 03:43:24,520 [wrapper] apfmon messages muted
[2025-10-11 23:43:24] 2025-10-12 03:43:24,524 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:43:24] 2025-10-12 03:43:24,528 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:43:24]  *** Error codes and diagnostics ***
[2025-10-11 23:43:24]     "exeErrorCode": 0,
[2025-10-11 23:43:24]     "exeErrorDiag": "",
[2025-10-11 23:43:24]     "pilotErrorCode": 0,
[2025-10-11 23:43:24]     "pilotErrorDiag": "",
[2025-10-11 23:43:24]  *** Listing of results directory ***
[2025-10-11 23:43:24] total 413636
[2025-10-11 23:43:24] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 16:53 pilot3.tar.gz
[2025-10-11 23:43:24] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 17:05 queuedata.json
[2025-10-11 23:43:24] -rwx------ 1 boincer umatlas     36292 Oct 11 17:06 runpilot2-wrapper.sh
[2025-10-11 23:43:24] -rw-r--r-- 1 boincer umatlas       100 Oct 11 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:43:24] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 22:27 run_atlas
[2025-10-11 23:43:24] -rw-r--r-- 1 boincer umatlas       105 Oct 11 22:27 job.xml
[2025-10-11 23:43:24] -rw-r--r-- 2 boincer umatlas 219870704 Oct 11 22:27 EVNT.46676267._002611.pool.root.1
[2025-10-11 23:43:24] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 22:27 start_atlas.sh
[2025-10-11 23:43:24] drwxrwx--x 2 boincer umatlas      4096 Oct 11 22:27 shared
[2025-10-11 23:43:24] -rw-r--r-- 2 boincer umatlas    569685 Oct 11 22:27 input.tar.gz
[2025-10-11 23:43:24] -rw-r--r-- 1 boincer umatlas         0 Oct 11 22:27 boinc_lockfile
[2025-10-11 23:43:24] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 22:27 pandaJob.out
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas    975496 Oct 11 22:28 agis_schedconf.cvmfs.json
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas   1560580 Oct 11 22:28 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:43:24] drwx------ 5 boincer umatlas      4096 Oct 11 22:28 pilot3
[2025-10-11 23:43:24] -rw-r--r-- 1 boincer umatlas      5952 Oct 11 23:36 init_data.xml
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas 197737463 Oct 11 23:42 HITS.46676269._065043.pool.root.1
[2025-10-11 23:43:24] -rw-r--r-- 1 boincer umatlas       529 Oct 11 23:42 boinc_task_state.xml
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas      1049 Oct 11 23:42 memory_monitor_summary.json
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas    380547 Oct 11 23:42 log.46676269._065043.job.log.tgz.1
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas      7859 Oct 11 23:42 heartbeat.json
[2025-10-11 23:43:24] -rw-r--r-- 1 boincer umatlas        27 Oct 11 23:43 wrapper_checkpoint.txt
[2025-10-11 23:43:24] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 23:43 boinc_mmap_file
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas        95 Oct 11 23:43 pilot_heartbeat.json
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas      5003 Oct 11 23:43 pilotlog.txt
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas    648776 Oct 11 23:43 log.46676269._065043.job.log.1
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas       357 Oct 11 23:43 output.list
[2025-10-11 23:43:24] -rw-r--r-- 1 boincer umatlas       620 Oct 11 23:43 runtime_log
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas   1044480 Oct 11 23:43 result.tar.gz
[2025-10-11 23:43:24] -rw-r--r-- 1 boincer umatlas      8705 Oct 11 23:43 runtime_log.err
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas       659 Oct 11 23:43 07OKDmCyvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgdhNDmoj2JZm.diag
[2025-10-11 23:43:24] -rw-r--r-- 1 boincer umatlas     21947 Oct 11 23:43 stderr.txt
[2025-10-11 23:43:24] HITS file was successfully produced:
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas 197737463 Oct 11 23:42 shared/HITS.pool.root.1
[2025-10-11 23:43:24]  *** Contents of shared directory: ***
[2025-10-11 23:43:24] total 409424
[2025-10-11 23:43:24] -rw-r--r-- 2 boincer umatlas 219870704 Oct 11 22:27 ATLAS.root_0
[2025-10-11 23:43:24] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 22:27 start_atlas.sh
[2025-10-11 23:43:24] -rw-r--r-- 2 boincer umatlas    569685 Oct 11 22:27 input.tar.gz
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas 197737463 Oct 11 23:42 HITS.pool.root.1
[2025-10-11 23:43:24] -rw------- 1 boincer umatlas   1044480 Oct 11 23:43 result.tar.gz
23:43:26 (5724): run_atlas exited; CPU time 47490.320200
23:43:26 (5724): called boinc_finish(0)

</stderr_txt>
]]>

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