Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:23:37 (3356710): wrapper (7.7.26015): starting
13:23:37 (3356710): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 13:23:37] Arguments: --nthreads 4
[2025-10-12 13:23:37] Threads: 4
[2025-10-12 13:23:37] Checking for CVMFS
[2025-10-12 13:23:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:23:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:23:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:23:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:23:37] 2.9.2.0 1879706 4180 95716 151619 2 57 22104609 36864000 0 130560 0 3669116 99.992 144254 813 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 13:23:37] CVMFS is ok
[2025-10-12 13:23:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:23:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:23:37] Further information can be found at the LHC@home message board.
[2025-10-12 13:23:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:23:37] Checking for apptainer binary...
[2025-10-12 13:23:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:23:37] Running /usr/bin/apptainer --version
[2025-10-12 13:23:37] apptainer version 1.4.1-1.1
[2025-10-12 13:23:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:23:37] thA317
[2025-10-12 13:23:37] apptainer works
[2025-10-12 13:23:37] Set ATHENA_PROC_NUMBER=4
[2025-10-12 13:23:37] Set ATHENA_CORE_NUMBER=4
[2025-10-12 13:23:37] Starting ATLAS job with PandaID=6838988652
[2025-10-12 13:23:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:35:57]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:35:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:35:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:35:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:35:57] 
[2025-10-12 14:35:57] 2025-10-12 12:34:50,372 | INFO     | ***************************************
[2025-10-12 14:35:57] 2025-10-12 12:34:50,875 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 14:35:57] 2025-10-12 12:34:50,894 | INFO     | sufficient remaining disk space (237598932992 B)
[2025-10-12 14:35:57] 2025-10-12 12:34:50,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:35:57] 2025-10-12 12:34:50,895 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:35:57] 2025-10-12 12:34:50,895 | INFO     | update_server=False
[2025-10-12 14:35:57] 2025-10-12 12:34:50,895 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:35:57] 2025-10-12 12:34:50,895 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:35:57] 2025-10-12 12:34:51,278 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 14:35:57] 2025-10-12 12:34:51,278 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 14:35:57] 2025-10-12 12:34:51,278 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:35:57] 2025-10-12 12:34:51,278 | INFO     | will abort loop
[2025-10-12 14:35:57] 2025-10-12 12:34:51,377 | INFO     | all data control threads have been joined
[2025-10-12 14:35:57] 2025-10-12 12:34:51,721 | INFO     | all job control threads have been joined
[2025-10-12 14:35:57] 2025-10-12 12:34:51,900 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:51,901 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:52,011 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:52,068 | INFO     | all payload control threads have been joined
[2025-10-12 14:35:57] 2025-10-12 12:34:52,093 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:52,284 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:52,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:35:57] 2025-10-12 12:34:52,333 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:52,383 | INFO     | [data] control thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:52,727 | INFO     | [job] control thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:52,835 | INFO     | [job] validate thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:52,853 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:52,948 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:53,074 | INFO     | [payload] control thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:53,075 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:53,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:35:57] 2025-10-12 12:34:54,314 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:34:57,567 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:35:01,868 | INFO     | job.realtimelogging is not enabled
[2025-10-12 14:35:57] 2025-10-12 12:35:02,874 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:35:57] 2025-10-12 12:35:21,536 | INFO     | PID=3360515 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:35:57] 2025-10-12 12:35:21,536 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:35:57] 2025-10-12 12:35:21,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:35:57] 2025-10-12 12:35:21,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:35:57] 2025-10-12 12:35:50,181 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:35:57] 2025-10-12 12:35:52,105 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140157320329024)>', '<ExcThread(monitor, started 140156283627264)>']
[2025-10-12 14:35:57] 2025-10-12 12:35:52,693 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:35:57] 2025-10-12 12:35:52,693 | INFO     | [monitor] control thread has ended
[2025-10-12 14:35:57] 2025-10-12 12:35:57,131 | INFO     | all workflow threads have been joined
[2025-10-12 14:35:57] 2025-10-12 12:35:57,131 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:35:57] 2025-10-12 12:35:57,131 | INFO     | traces error code: 0
[2025-10-12 14:35:57] 2025-10-12 12:35:57,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:35:57] 2025-10-12 12:35:57,214 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:35:57] 2025-10-12 12:35:57,218 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:35:57] 2025-10-12 12:35:57,222 [wrapper] pilotpid: 3360515
[2025-10-12 14:35:57] 2025-10-12 12:35:57,226 [wrapper] Pilot exit status: 0
[2025-10-12 14:35:57] 2025-10-12 12:35:57,238 [wrapper] pandaids: 6838988652
[2025-10-12 14:35:57] 2025-10-12 12:35:57,263 [wrapper] cleanup supervisor_pilot 3376985 3360516
[2025-10-12 14:35:57] 2025-10-12 12:35:57,266 [wrapper] Test setup, not cleaning
[2025-10-12 14:35:57] 2025-10-12 12:35:57,270 [wrapper] apfmon messages muted
[2025-10-12 14:35:57] 2025-10-12 12:35:57,274 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:35:57] 2025-10-12 12:35:57,278 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:35:57]  *** Error codes and diagnostics ***
[2025-10-12 14:35:57]     "exeErrorCode": 0,
[2025-10-12 14:35:57]     "exeErrorDiag": "",
[2025-10-12 14:35:57]     "pilotErrorCode": 0,
[2025-10-12 14:35:57]     "pilotErrorDiag": "",
[2025-10-12 14:35:57]  *** Listing of results directory ***
[2025-10-12 14:35:57] total 405932
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc    557409 Oct 11 22:53 pilot3.tar.gz
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc      5112 Oct 11 23:05 queuedata.json
[2025-10-12 14:35:57] -rwx------ 1 boinc boinc     36292 Oct 11 23:06 runpilot2-wrapper.sh
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc       100 Oct 12 13:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:35:57] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 13:23 run_atlas
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc       105 Oct 12 13:23 job.xml
[2025-10-12 14:35:57] -rw-r--r-- 2 boinc boinc 219785997 Oct 12 13:23 EVNT.46676267._002614.pool.root.1
[2025-10-12 14:35:57] -rw-r--r-- 2 boinc boinc    569680 Oct 12 13:23 input.tar.gz
[2025-10-12 14:35:57] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:23 start_atlas.sh
[2025-10-12 14:35:57] drwxrwx--x 2 boinc boinc      4096 Oct 12 13:23 shared
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:23 boinc_setup_complete
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc      6377 Oct 12 13:23 init_data.xml
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:23 boinc_lockfile
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc      2547 Oct 12 13:23 pandaJob.out
[2025-10-12 14:35:57] -rw------- 1 boinc boinc    975520 Oct 12 13:23 agis_schedconf.cvmfs.json
[2025-10-12 14:35:57] -rw------- 1 boinc boinc   1560580 Oct 12 13:23 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:35:57] drwx------ 5 boinc boinc      4096 Oct 12 13:23 pilot3
[2025-10-12 14:35:57] -rw------- 1 boinc boinc 190235935 Oct 12 14:34 HITS.46676269._065084.pool.root.1
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc       529 Oct 12 14:34 boinc_task_state.xml
[2025-10-12 14:35:57] -rw------- 1 boinc boinc      1022 Oct 12 14:34 memory_monitor_summary.json
[2025-10-12 14:35:57] -rw------- 1 boinc boinc    243829 Oct 12 14:34 log.46676269._065084.job.log.tgz.1
[2025-10-12 14:35:57] -rw------- 1 boinc boinc      7761 Oct 12 14:34 heartbeat.json
[2025-10-12 14:35:57] -rw------- 1 boinc boinc        95 Oct 12 14:35 pilot_heartbeat.json
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc      8192 Oct 12 14:35 boinc_mmap_file
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc        27 Oct 12 14:35 wrapper_checkpoint.txt
[2025-10-12 14:35:57] -rw------- 1 boinc boinc      5010 Oct 12 14:35 pilotlog.txt
[2025-10-12 14:35:57] -rw------- 1 boinc boinc    633233 Oct 12 14:35 log.46676269._065084.job.log.1
[2025-10-12 14:35:57] -rw------- 1 boinc boinc       357 Oct 12 14:35 output.list
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc       620 Oct 12 14:35 runtime_log
[2025-10-12 14:35:57] -rw------- 1 boinc boinc    901120 Oct 12 14:35 result.tar.gz
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc      8777 Oct 12 14:35 runtime_log.err
[2025-10-12 14:35:57] -rw------- 1 boinc boinc       658 Oct 12 14:35 8bzKDmCyvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtdhNDmP11OVn.diag
[2025-10-12 14:35:57] -rw-r--r-- 1 boinc boinc      8477 Oct 12 14:35 stderr.txt
[2025-10-12 14:35:57] HITS file was successfully produced:
[2025-10-12 14:35:57] -rw------- 1 boinc boinc 190235935 Oct 12 14:34 shared/HITS.pool.root.1
[2025-10-12 14:35:57]  *** Contents of shared directory: ***
[2025-10-12 14:35:57] total 401880
[2025-10-12 14:35:57] -rw-r--r-- 2 boinc boinc 219785997 Oct 12 13:23 ATLAS.root_0
[2025-10-12 14:35:57] -rw-r--r-- 2 boinc boinc    569680 Oct 12 13:23 input.tar.gz
[2025-10-12 14:35:57] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:23 start_atlas.sh
[2025-10-12 14:35:57] -rw------- 1 boinc boinc 190235935 Oct 12 14:34 HITS.pool.root.1
[2025-10-12 14:35:57] -rw------- 1 boinc boinc    901120 Oct 12 14:35 result.tar.gz
14:35:58 (3356710): run_atlas exited; CPU time 15981.372460
14:35:58 (3356710): called boinc_finish(0)

</stderr_txt>
]]>

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