Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:19:37 (12661): wrapper (7.7.26015): starting
22:19:37 (12661): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 22:19:37] Arguments: --nthreads 12
[2025-10-11 22:19:37] Threads: 12
[2025-10-11 22:19:37] Checking for CVMFS
[2025-10-11 22:19:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:19:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:19:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:19:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:19:37] 2.11.2.0 3035 222227 97524 151604 3 56 14413337 20275201 1 130560 3 107533335 99.984 13631502 12601 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 22:19:37] CVMFS is ok
[2025-10-11 22:19:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:19:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:19:37] Further information can be found at the LHC@home message board.
[2025-10-11 22:19:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:19:37] Checking for apptainer binary...
[2025-10-11 22:19:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:19:37] Running /usr/bin/apptainer --version
[2025-10-11 22:19:37] apptainer version 1.3.2-1.el7
[2025-10-11 22:19:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:19:39] c-205-31.aglt2.org
[2025-10-11 22:19:39] apptainer works
[2025-10-11 22:19:39] Set ATHENA_PROC_NUMBER=12
[2025-10-11 22:19:39] Set ATHENA_CORE_NUMBER=12
[2025-10-11 22:19:39] Starting ATLAS job with PandaID=6838913822
[2025-10-11 22:19:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:31:07]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:31:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 23:31:07]  replicas=None
[2025-10-11 23:31:07]  scope=mc23_13p6TeV
[2025-10-11 23:31:07]  status=None
[2025-10-11 23:31:07]  status_code=0
[2025-10-11 23:31:07]  storage_token=
[2025-10-11 23:31:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838913822/log.46676269._064925.job.log.tgz.1
[2025-10-11 23:31:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/9c/log.46676269._064925.job.log.tgz.1
[2025-10-11 23:31:07]  workdir=None
[2025-10-11 23:31:07] ]
[2025-10-11 23:31:07] 2025-10-12 03:30:20,344 | INFO     | transferring file log.46676269._064925.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838913822/log.46676269._064925.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 23:31:07] 2025-10-12 03:30:20,344 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838913822/log.46676269._064925.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._064925.job
[2025-10-11 23:31:07] 2025-10-12 03:30:20,366 | INFO     | adding to output.list: log.46676269._064925.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dd/9c/log.46676269._064925.job.log.tg
[2025-10-11 23:31:07] 2025-10-12 03:30:20,367 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 23:31:07] 2025-10-12 03:30:20,367 | INFO     | summary of transferred files:
[2025-10-11 23:31:07] 2025-10-12 03:30:20,367 | INFO     |  -- lfn=log.46676269._064925.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 23:31:07] 2025-10-12 03:30:20,368 | INFO     | stage-out finished correctly
[2025-10-11 23:31:07] 2025-10-12 03:30:21,275 | INFO     | time since job start (4227s) is within the limit (172800.0s)
[2025-10-11 23:31:07] 2025-10-12 03:30:21,793 | INFO     | monitor loop #317: job 0:6838913822 is in state 'finished'
[2025-10-11 23:31:07] 2025-10-12 03:30:21,793 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:31:07] 2025-10-12 03:30:22,276 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 23:31:07] 2025-10-12 03:30:23,283 | INFO     | time since job start (4229s) is within the limit (172800.0s)
[2025-10-11 23:31:07] 2025-10-12 03:30:24,184 | INFO     | job 6838913822 has state=finished
[2025-10-11 23:31:07] 2025-10-12 03:30:24,184 | INFO     | preparing for final server update for job 6838913822 in state='finished'
[2025-10-11 23:31:07] 2025-10-12 03:30:24,185 | INFO     | this job has now completed (state=finished)
[2025-10-11 23:31:07] 2025-10-12 03:30:24,185 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 23:31:07] 2025-10-12 03:30:24,185 | INFO     | log transfer has been attempted: DONE
[2025-10-11 23:31:07] 2025-10-12 03:30:24,185 | INFO     | job 6838913822 has finished - writing final server update
[2025-10-11 23:31:07] 2025-10-12 03:30:24,186 | INFO     | total number of processed events: 400 (read)
[2025-10-11 23:31:07] 2025-10-12 03:30:24,186 | INFO     | executing command: lscpu
[2025-10-11 23:31:07] 2025-10-12 03:30:24,212 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 23:31:07] 2025-10-12 03:30:24,296 | INFO     | monitor loop #318: job 0:6838913822 is in state 'finished'
[2025-10-11 23:31:07] 2025-10-12 03:30:24,296 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:31:07] 2025-10-12 03:30:25,288 | INFO     | time since job start (4231s) is within the limit (172800.0s)
[2025-10-11 23:31:07] 2025-10-12 03:30:26,799 | INFO     | monitor loop #319: job 0:6838913822 is in state 'finished'
[2025-10-11 23:31:07] 2025-10-12 03:30:26,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:31:07] 2025-10-12 03:30:27,293 | INFO     | time since job start (4233s) is within the limit (172800.0s)
[2025-10-11 23:31:07] 2025-10-12 03:30:28,911 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-11 23:31:07] 2025-10-12 03:30:28,915 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-11 23:31:07] 2025-10-12 03:30:28,916 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838913822/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:31:07] 2025-10-12 03:30:28,917 | INFO     | extracted standard info from prmon json
[2025-10-11 23:31:07] 2025-10-12 03:30:28,917 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:31:07] 2025-10-12 03:30:28,917 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:31:07] 2025-10-12 03:30:28,918 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:31:07] 2025-10-12 03:30:28,918 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:31:07] 2025-10-12 03:30:28,919 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:31:07] 2025-10-12 03:30:28,919 | INFO     | sum of square deviations: 73882315.5
[2025-10-11 23:31:07] 2025-10-12 03:30:28,920 | INFO     | sum of deviations: -3352825716.0
[2025-10-11 23:31:07] 2025-10-12 03:30:28,920 | INFO     | mean x: 1760237788.5
[2025-10-11 23:31:07] 2025-10-12 03:30:28,920 | INFO     | mean y: 2922955.580645161
[2025-10-11 23:31:07] 2025-10-12 03:30:28,920 | INFO     | -- intersect: 79883615427.35042
[2025-10-11 23:31:07] 2025-10-12 03:30:28,920 | INFO     | intersect: 79883615427.35042
[2025-10-11 23:31:07] 2025-10-12 03:30:28,920 | INFO     | chi2: 0.060101719940538756
[2025-10-11 23:31:07] 2025-10-12 03:30:28,920 | INFO     | -- intersect: 79883615427.35042
[2025-10-11 23:31:07] 2025-10-12 03:30:28,921 | INFO     | current memory leak: -45.38 B/s (using 62 data points, chi2=0.06)
[2025-10-11 23:31:07] 2025-10-12 03:30:28,921 | INFO     | could have reported an average CPU frequency of 2056 MHz (6 samples)
[2025-10-11 23:31:07] 2025-10-12 03:30:28,921 | INFO     | ..............................
[2025-10-11 23:31:07] 2025-10-12 03:30:28,921 | INFO     | . Timing measurements:
[2025-10-11 23:31:07] 2025-10-12 03:30:28,921 | INFO     | . get job = 0 s
[2025-10-11 23:31:07] 2025-10-12 03:30:28,921 | INFO     | . initial setup = 2 s
[2025-10-11 23:31:07] 2025-10-12 03:30:28,921 | INFO     | . payload setup = 7 s
[2025-10-11 23:31:07] 2025-10-12 03:30:28,921 | INFO     | . stage-in = 0 s
[2025-10-11 23:31:07] 2025-10-12 03:30:28,922 | INFO     | . payload execution = 4198 s
[2025-10-11 23:31:07] 2025-10-12 03:30:28,922 | INFO     | . stage-out = 0 s
[2025-10-11 23:31:07] 2025-10-12 03:30:28,922 | INFO     | . log creation = 0 s
[2025-10-11 23:31:07] 2025-10-12 03:30:28,922 | INFO     | ..............................
[2025-10-11 23:31:07] 2025-10-12 03:30:29,003 | INFO     | 
[2025-10-11 23:31:07] 2025-10-12 03:30:29,003 | INFO     | job summary report
[2025-10-11 23:31:07] 2025-10-12 03:30:29,003 | INFO     | --------------------------------------------------
[2025-10-11 23:31:07] 2025-10-12 03:30:29,004 | INFO     | PanDA job id: 6838913822
[2025-10-11 23:31:07] 2025-10-12 03:30:29,004 | INFO     | task id: 46676269
[2025-10-11 23:31:07] 2025-10-12 03:30:29,004 | INFO     | errors: (none)
[2025-10-11 23:31:07] 2025-10-12 03:30:29,004 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:31:07] 2025-10-12 03:30:29,004 | INFO     | pilot state: finished 
[2025-10-11 23:31:07] 2025-10-12 03:30:29,004 | INFO     | transexitcode: 0
[2025-10-11 23:31:07] 2025-10-12 03:30:29,004 | INFO     | exeerrorcode: 0
[2025-10-11 23:31:07] 2025-10-12 03:30:29,005 | INFO     | exeerrordiag: 
[2025-10-11 23:31:07] 2025-10-12 03:30:29,005 | INFO     | exitcode: 0
[2025-10-11 23:31:07] 2025-10-12 03:30:29,005 | INFO     | exitmsg: OK
[2025-10-11 23:31:07] 2025-10-12 03:30:29,005 | INFO     | cpuconsumptiontime: 45865 s
[2025-10-11 23:31:07] 2025-10-12 03:30:29,005 | INFO     | nevents: 400
[2025-10-11 23:31:07] 2025-10-12 03:30:29,005 | INFO     | neventsw: 0
[2025-10-11 23:31:07] 2025-10-12 03:30:29,006 | INFO     | pid: 23894
[2025-10-11 23:31:07] 2025-10-12 03:30:29,006 | INFO     | pgrp: 23894
[2025-10-11 23:31:07] 2025-10-12 03:30:29,006 | INFO     | corecount: 12
[2025-10-11 23:31:07] 2025-10-12 03:30:29,006 | INFO     | event service: False
[2025-10-11 23:31:07] 2025-10-12 03:30:29,006 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4209: 2375100, 4210: 2384098, 4211: 2384154, 4218: 2384476}
[2025-10-11 23:31:07] 2025-10-12 03:30:29,007 | INFO     | --------------------------------------------------
[2025-10-11 23:31:07] 2025-10-12 03:30:29,007 | INFO     | 
[2025-10-11 23:31:07] 2025-10-12 03:30:29,007 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 23:31:07] 2025-10-12 03:30:29,033 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,033 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,033 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,034 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,034 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,034 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,034 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,034 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,035 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,035 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,035 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,035 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,035 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,035 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,035 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,035 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,035 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:31:07] 2025-10-12 03:30:29,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,036 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:31:07] 2025-10-12 03:30:29,036 | INFO     | job 6838913822 has completed (purged errors)
[2025-10-11 23:31:07] 2025-10-12 03:30:29,036 | INFO     | overall cleanup function is called
[2025-10-11 23:31:07] 2025-10-12 03:30:30,043 | INFO     | --- collectZombieJob: --- 10, [23894]
[2025-10-11 23:31:07] 2025-10-12 03:30:30,043 | INFO     | zombie collector waiting for pid 23894
[2025-10-11 23:31:07] 2025-10-12 03:30:30,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:31:07] 2025-10-12 03:30:30,044 | INFO     | collected zombie processes
[2025-10-11 23:31:07] 2025-10-12 03:30:30,044 | INFO     | will attempt to kill all subprocesses of pid=23894
[2025-10-11 23:31:07] 2025-10-12 03:30:30,135 | INFO     | process IDs to be killed: [23894] (in reverse order)
[2025-10-11 23:31:07] 2025-10-12 03:30:30,190 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:31:07] 2025-10-12 03:30:30,191 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:31:07] 2025-10-12 03:30:30,194 | INFO     | did not find any defunct processes belonging to 23894
[2025-10-11 23:31:07] 2025-10-12 03:30:30,197 | INFO     | did not find any defunct processes belonging to 23894
[2025-10-11 23:31:07] 2025-10-12 03:30:30,197 | INFO     | ready for new job
[2025-10-11 23:31:07] 2025-10-12 03:30:30,197 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:31:07] 2025-10-12 03:30:30,198 | INFO     | ***************************************
[2025-10-11 23:31:07] 2025-10-12 03:30:30,198 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:31:07] 2025-10-12 03:30:30,198 | INFO     | ***************************************
[2025-10-11 23:31:07] 2025-10-12 03:30:30,198 | INFO     | 
[2025-10-11 23:31:07] 2025-10-12 03:30:30,199 | INFO     | architecture information:
[2025-10-11 23:31:07] 2025-10-12 03:30:30,199 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:31:07] 2025-10-12 03:30:30,215 | INFO     | cat /etc/os-release:
[2025-10-11 23:31:07] NAME="CentOS Linux"
[2025-10-11 23:31:07] VERSION="7 (Core)"
[2025-10-11 23:31:07] ID="centos"
[2025-10-11 23:31:07] ID_LIKE="rhel fedora"
[2025-10-11 23:31:07] VERSION_ID="7"
[2025-10-11 23:31:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:31:07] ANSI_COLOR="0;31"
[2025-10-11 23:31:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:31:07] HOME_URL="https://www.centos.org/"
[2025-10-11 23:31:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:31:07] 
[2025-10-11 23:31:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:31:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:31:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:31:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:31:07] 
[2025-10-11 23:31:07] 2025-10-12 03:30:30,215 | INFO     | ***************************************
[2025-10-11 23:31:07] 2025-10-12 03:30:30,718 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 23:31:07] 2025-10-12 03:30:30,735 | INFO     | sufficient remaining disk space (29367468032 B)
[2025-10-11 23:31:07] 2025-10-12 03:30:30,735 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:31:07] 2025-10-12 03:30:30,736 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:31:07] 2025-10-12 03:30:30,736 | INFO     | update_server=False
[2025-10-11 23:31:07] 2025-10-12 03:30:30,736 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:31:07] 2025-10-12 03:30:30,736 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:31:07] 2025-10-12 03:30:30,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:31:07] 2025-10-12 03:30:30,737 | INFO     | aborting loop
[2025-10-11 23:31:07] 2025-10-12 03:30:30,758 | INFO     | all job control threads have been joined
[2025-10-11 23:31:07] 2025-10-12 03:30:30,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:31:07] 2025-10-12 03:30:31,348 | INFO     | all payload control threads have been joined
[2025-10-11 23:31:07] 2025-10-12 03:30:31,475 | INFO     | all data control threads have been joined
[2025-10-11 23:31:07] 2025-10-12 03:30:31,742 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:31,742 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:31,743 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:31,755 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:31,764 | INFO     | [job] control thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:31,798 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:31,977 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:32,349 | INFO     | [payload] control thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:32,480 | INFO     | [data] control thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:32,511 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:32,515 | INFO     | [job] validate thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:32,753 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:32,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:31:07] 2025-10-12 03:30:32,971 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:33,214 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:33,222 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:30:36,872 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:31:07] 2025-10-12 03:31:00,485 | INFO     | PID=16380 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 23:31:07] 2025-10-12 03:31:00,485 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:31:07] 2025-10-12 03:31:00,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:31:07] 2025-10-12 03:31:00,486 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:31:07] 2025-10-12 03:31:00,645 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:31:07] 2025-10-12 03:31:02,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140392560621376)>', '<ExcThread(monitor, started 140391609267968)>']
[2025-10-11 23:31:07] 2025-10-12 03:31:02,496 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:31:07] 2025-10-12 03:31:02,496 | INFO     | [monitor] control thread has ended
[2025-10-11 23:31:07] 2025-10-12 03:31:07,482 | INFO     | all workflow threads have been joined
[2025-10-11 23:31:07] 2025-10-12 03:31:07,482 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:31:07] 2025-10-12 03:31:07,482 | INFO     | traces error code: 0
[2025-10-11 23:31:07] 2025-10-12 03:31:07,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:31:07] 2025-10-12 03:31:07,575 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:31:07] 2025-10-12 03:31:07,579 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:31:07] 2025-10-12 03:31:07,583 [wrapper] pilotpid: 16380
[2025-10-11 23:31:07] 2025-10-12 03:31:07,586 [wrapper] Pilot exit status: 0
[2025-10-11 23:31:07] 2025-10-12 03:31:07,601 [wrapper] pandaids: 6838913822
[2025-10-11 23:31:07] 2025-10-12 03:31:07,642 [wrapper] cleanup supervisor_pilot  5117 16381
[2025-10-11 23:31:07] 2025-10-12 03:31:07,646 [wrapper] Test setup, not cleaning
[2025-10-11 23:31:07] 2025-10-12 03:31:07,650 [wrapper] apfmon messages muted
[2025-10-11 23:31:07] 2025-10-12 03:31:07,654 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:31:07] 2025-10-12 03:31:07,657 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:31:07]  *** Error codes and diagnostics ***
[2025-10-11 23:31:07]     "exeErrorCode": 0,
[2025-10-11 23:31:07]     "exeErrorDiag": "",
[2025-10-11 23:31:07]     "pilotErrorCode": 0,
[2025-10-11 23:31:07]     "pilotErrorDiag": "",
[2025-10-11 23:31:07]  *** Listing of results directory ***
[2025-10-11 23:31:07] total 408352
[2025-10-11 23:31:07] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 16:53 pilot3.tar.gz
[2025-10-11 23:31:07] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 17:01 queuedata.json
[2025-10-11 23:31:07] -rwx------ 1 boincer umatlas     36292 Oct 11 17:01 runpilot2-wrapper.sh
[2025-10-11 23:31:07] -rw-r--r-- 1 boincer umatlas       100 Oct 11 22:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:31:07] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 22:19 run_atlas
[2025-10-11 23:31:07] -rw-r--r-- 1 boincer umatlas       105 Oct 11 22:19 job.xml
[2025-10-11 23:31:07] -rw-r--r-- 2 boincer umatlas 222024568 Oct 11 22:19 EVNT.46676267._002608.pool.root.1
[2025-10-11 23:31:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 22:19 start_atlas.sh
[2025-10-11 23:31:07] drwxrwx--x 2 boincer umatlas      4096 Oct 11 22:19 shared
[2025-10-11 23:31:07] -rw-r--r-- 2 boincer umatlas    569685 Oct 11 22:19 input.tar.gz
[2025-10-11 23:31:07] -rw-r--r-- 1 boincer umatlas         0 Oct 11 22:19 boinc_lockfile
[2025-10-11 23:31:07] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 22:19 pandaJob.out
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas    975496 Oct 11 22:19 agis_schedconf.cvmfs.json
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas   1560580 Oct 11 22:19 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:31:07] drwx------ 5 boincer umatlas      4096 Oct 11 22:19 pilot3
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas 190258026 Oct 11 23:29 HITS.46676269._064925.pool.root.1
[2025-10-11 23:31:07] -rw-r--r-- 1 boincer umatlas       529 Oct 11 23:30 boinc_task_state.xml
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas      1049 Oct 11 23:30 memory_monitor_summary.json
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas    368624 Oct 11 23:30 log.46676269._064925.job.log.tgz.1
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas      7850 Oct 11 23:30 heartbeat.json
[2025-10-11 23:31:07] -rw-r--r-- 1 boincer umatlas      5953 Oct 11 23:30 init_data.xml
[2025-10-11 23:31:07] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 23:30 boinc_mmap_file
[2025-10-11 23:31:07] -rw-r--r-- 1 boincer umatlas        27 Oct 11 23:30 wrapper_checkpoint.txt
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas        95 Oct 11 23:31 pilot_heartbeat.json
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas      4746 Oct 11 23:31 pilotlog.txt
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas    618185 Oct 11 23:31 log.46676269._064925.job.log.1
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas       357 Oct 11 23:31 output.list
[2025-10-11 23:31:07] -rw-r--r-- 1 boincer umatlas       620 Oct 11 23:31 runtime_log
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas   1003520 Oct 11 23:31 result.tar.gz
[2025-10-11 23:31:07] -rw-r--r-- 1 boincer umatlas      8705 Oct 11 23:31 runtime_log.err
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas       659 Oct 11 23:31 DHCODmStvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhchNDm4C2b2m.diag
[2025-10-11 23:31:07] -rw-r--r-- 1 boincer umatlas     21860 Oct 11 23:31 stderr.txt
[2025-10-11 23:31:07] HITS file was successfully produced:
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas 190258026 Oct 11 23:29 shared/HITS.pool.root.1
[2025-10-11 23:31:07]  *** Contents of shared directory: ***
[2025-10-11 23:31:07] total 404184
[2025-10-11 23:31:07] -rw-r--r-- 2 boincer umatlas 222024568 Oct 11 22:19 ATLAS.root_0
[2025-10-11 23:31:07] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 22:19 start_atlas.sh
[2025-10-11 23:31:07] -rw-r--r-- 2 boincer umatlas    569685 Oct 11 22:19 input.tar.gz
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas 190258026 Oct 11 23:29 HITS.pool.root.1
[2025-10-11 23:31:07] -rw------- 1 boincer umatlas   1003520 Oct 11 23:31 result.tar.gz
23:31:09 (12661): run_atlas exited; CPU time 45839.741436
23:31:09 (12661): called boinc_finish(0)

</stderr_txt>
]]>

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