Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:35:33 (3292784): wrapper (7.7.26015): starting
14:35:33 (3292784): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 14:35:33] Arguments: --nthreads 4
[2025-10-12 14:35:33] Threads: 4
[2025-10-12 14:35:33] Checking for CVMFS
[2025-10-12 14:35:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 14:35:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 14:35:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 14:35:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 14:35:33] 2.9.2.0 1857307 4150 97392 151620 3 57 29694153 36864000 0 130560 0 3732595 99.992 141800 864 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 14:35:33] CVMFS is ok
[2025-10-12 14:35:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 14:35:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 14:35:33] Further information can be found at the LHC@home message board.
[2025-10-12 14:35:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 14:35:33] Checking for apptainer binary...
[2025-10-12 14:35:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 14:35:33] Running /usr/bin/apptainer --version
[2025-10-12 14:35:33] apptainer version 1.4.1-1.1
[2025-10-12 14:35:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 14:35:33] thA319a
[2025-10-12 14:35:33] apptainer works
[2025-10-12 14:35:33] Set ATHENA_PROC_NUMBER=4
[2025-10-12 14:35:33] Set ATHENA_CORE_NUMBER=4
[2025-10-12 14:35:33] Starting ATLAS job with PandaID=6838603287
[2025-10-12 14:35:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:50:52]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:50:52] 2025-10-12 13:49:53,206 | INFO     | aborting loop
[2025-10-12 15:50:52] 2025-10-12 13:49:53,244 | INFO     | all data control threads have been joined
[2025-10-12 15:50:52] 2025-10-12 13:49:53,602 | INFO     | all payload control threads have been joined
[2025-10-12 15:50:52] 2025-10-12 13:49:53,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:50:52] 2025-10-12 13:49:54,028 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:54,028 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:54,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:54,038 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:54,056 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:54,179 | INFO     | all job control threads have been joined
[2025-10-12 15:50:52] 2025-10-12 13:49:54,211 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:54,250 | INFO     | [data] control thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:54,368 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:50:52] 2025-10-12 13:49:54,451 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:54,608 | INFO     | [payload] control thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:54,650 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:54,800 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:55,185 | INFO     | [job] control thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:55,396 | INFO     | [job] validate thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:55,442 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:55,735 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:49:58,375 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:50:52] 2025-10-12 13:50:22,935 | INFO     | PID=3296571 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 15:50:52] 2025-10-12 13:50:22,935 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:50:52] 2025-10-12 13:50:22,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:50:52] 2025-10-12 13:50:22,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:50:52] 2025-10-12 13:50:40,178 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-12 15:50:52] 2025-10-12 13:50:46,520 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:50:52] 2025-10-12 13:50:47,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140335349368640)>', '<ExcThread(monitor, started 140333954361088)>']
[2025-10-12 15:50:52] 2025-10-12 13:50:48,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:50:52] 2025-10-12 13:50:48,069 | INFO     | [monitor] control thread has ended
[2025-10-12 15:50:52] 2025-10-12 13:50:52,469 | INFO     | all workflow threads have been joined
[2025-10-12 15:50:52] 2025-10-12 13:50:52,469 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:50:52] 2025-10-12 13:50:52,470 | INFO     | traces error code: 0
[2025-10-12 15:50:52] 2025-10-12 13:50:52,470 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:50:52] 2025-10-12 13:50:52,549 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:50:52] 2025-10-12 13:50:52,552 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:50:52] 2025-10-12 13:50:52,556 [wrapper] pilotpid: 3296571
[2025-10-12 15:50:52] 2025-10-12 13:50:52,560 [wrapper] Pilot exit status: 0
[2025-10-12 15:50:52] 2025-10-12 13:50:52,572 [wrapper] pandaids: 6838603287
[2025-10-12 15:50:52] 2025-10-12 13:50:52,596 [wrapper] cleanup supervisor_pilot 3318251 3296572
[2025-10-12 15:50:52] 2025-10-12 13:50:52,600 [wrapper] Test setup, not cleaning
[2025-10-12 15:50:52] 2025-10-12 13:50:52,604 [wrapper] apfmon messages muted
[2025-10-12 15:50:52] 2025-10-12 13:50:52,608 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:50:52] 2025-10-12 13:50:52,612 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:50:52]  *** Error codes and diagnostics ***
[2025-10-12 15:50:52]     "exeErrorCode": 0,
[2025-10-12 15:50:52]     "exeErrorDiag": "",
[2025-10-12 15:50:52]     "pilotErrorCode": 0,
[2025-10-12 15:50:52]     "pilotErrorDiag": "",
[2025-10-12 15:50:52]  *** Listing of results directory ***
[2025-10-12 15:50:52] total 414768
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc    557409 Oct 11 17:05 pilot3.tar.gz
[2025-10-12 15:50:52] -rwx------ 1 boinc boinc     36292 Oct 11 17:06 runpilot2-wrapper.sh
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc      5112 Oct 11 17:06 queuedata.json
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc       100 Oct 12 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:50:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 14:35 run_atlas
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc       105 Oct 12 14:35 job.xml
[2025-10-12 15:50:52] -rw-r--r-- 2 boinc boinc 223491191 Oct 12 14:35 EVNT.46676267._002396.pool.root.1
[2025-10-12 15:50:52] -rw-r--r-- 2 boinc boinc    569676 Oct 12 14:35 input.tar.gz
[2025-10-12 15:50:52] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:35 start_atlas.sh
[2025-10-12 15:50:52] drwxrwx--x 2 boinc boinc      4096 Oct 12 14:35 shared
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:35 boinc_setup_complete
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc      6367 Oct 12 14:35 init_data.xml
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc         0 Oct 12 14:35 boinc_lockfile
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc      2550 Oct 12 14:35 pandaJob.out
[2025-10-12 15:50:52] -rw------- 1 boinc boinc    975512 Oct 12 14:35 agis_schedconf.cvmfs.json
[2025-10-12 15:50:52] -rw------- 1 boinc boinc   1560580 Oct 12 14:35 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:50:52] drwx------ 5 boinc boinc      4096 Oct 12 14:35 pilot3
[2025-10-12 15:50:52] -rw------- 1 boinc boinc 195513622 Oct 12 15:49 HITS.46676269._060005.pool.root.1
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc       529 Oct 12 15:49 boinc_task_state.xml
[2025-10-12 15:50:52] -rw------- 1 boinc boinc      1024 Oct 12 15:49 memory_monitor_summary.json
[2025-10-12 15:50:52] -rw------- 1 boinc boinc    254689 Oct 12 15:49 log.46676269._060005.job.log.tgz.1
[2025-10-12 15:50:52] -rw------- 1 boinc boinc      7772 Oct 12 15:49 heartbeat.json
[2025-10-12 15:50:52] -rw------- 1 boinc boinc        95 Oct 12 15:50 pilot_heartbeat.json
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc      8192 Oct 12 15:50 boinc_mmap_file
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc        27 Oct 12 15:50 wrapper_checkpoint.txt
[2025-10-12 15:50:52] -rw------- 1 boinc boinc      4752 Oct 12 15:50 pilotlog.txt
[2025-10-12 15:50:52] -rw------- 1 boinc boinc    658948 Oct 12 15:50 log.46676269._060005.job.log.1
[2025-10-12 15:50:52] -rw------- 1 boinc boinc       357 Oct 12 15:50 output.list
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc       620 Oct 12 15:50 runtime_log
[2025-10-12 15:50:52] -rw------- 1 boinc boinc    931840 Oct 12 15:50 result.tar.gz
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc      8782 Oct 12 15:50 runtime_log.err
[2025-10-12 15:50:52] -rw------- 1 boinc boinc       659 Oct 12 15:50 cC6LDm1LqR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm97RMDm0wMZsn.diag
[2025-10-12 15:50:52] -rw-r--r-- 1 boinc boinc      7039 Oct 12 15:50 stderr.txt
[2025-10-12 15:50:52] HITS file was successfully produced:
[2025-10-12 15:50:52] -rw------- 1 boinc boinc 195513622 Oct 12 15:49 shared/HITS.pool.root.1
[2025-10-12 15:50:52]  *** Contents of shared directory: ***
[2025-10-12 15:50:52] total 410684
[2025-10-12 15:50:52] -rw-r--r-- 2 boinc boinc 223491191 Oct 12 14:35 ATLAS.root_0
[2025-10-12 15:50:52] -rw-r--r-- 2 boinc boinc    569676 Oct 12 14:35 input.tar.gz
[2025-10-12 15:50:52] -rw-r--r-- 2 boinc boinc     15120 Oct 12 14:35 start_atlas.sh
[2025-10-12 15:50:52] -rw------- 1 boinc boinc 195513622 Oct 12 15:49 HITS.pool.root.1
[2025-10-12 15:50:52] -rw------- 1 boinc boinc    931840 Oct 12 15:50 result.tar.gz
15:50:54 (3292784): run_atlas exited; CPU time 16846.146258
15:50:54 (3292784): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN