Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:26:28 (1974702): wrapper (7.7.26015): starting
01:26:28 (1974702): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 01:26:28] Arguments: --nthreads 9
[2025-10-12 01:26:28] Threads: 9
[2025-10-12 01:26:28] Checking for CVMFS
[2025-10-12 01:26:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 01:26:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 01:26:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 01:26:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 01:26:29] 2.13.2.0 128560 115554 193096 151609 1 64 29030857 39288832 7257 16776704 1 71999922 99.563 80418837 35348 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 01:26:29] CVMFS is ok
[2025-10-12 01:26:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 01:26:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 01:26:29] Further information can be found at the LHC@home message board.
[2025-10-12 01:26:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 01:26:29] Checking for apptainer binary...
[2025-10-12 01:26:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 01:26:29] Running /usr/bin/apptainer --version
[2025-10-12 01:26:29] apptainer version 1.4.3-1.el9
[2025-10-12 01:26:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 01:26:30] c-211-5.aglt2.org
[2025-10-12 01:26:30] apptainer works
[2025-10-12 01:26:30] Set ATHENA_PROC_NUMBER=9
[2025-10-12 01:26:30] Set ATHENA_CORE_NUMBER=9
[2025-10-12 01:26:30] Starting ATLAS job with PandaID=6838912910
[2025-10-12 01:26:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:46:26 (2365638): wrapper (7.7.26015): starting
05:46:26 (2365638): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 05:46:26] Arguments: --nthreads 9
[2025-10-12 05:46:26] Threads: 9
[2025-10-12 05:46:26] This job has been restarted, cleaning up previous attempt
[2025-10-12 05:46:26] Checking for CVMFS
[2025-10-12 05:46:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 05:46:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 05:46:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 05:46:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 05:46:27] 2.13.2.0 128560 115814 193296 151615 1 141 29288134 39288833 6341 16776704 1 72306817 99.564 80426984 35347 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 05:46:27] CVMFS is ok
[2025-10-12 05:46:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 05:46:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 05:46:27] Further information can be found at the LHC@home message board.
[2025-10-12 05:46:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 05:46:27] Checking for apptainer binary...
[2025-10-12 05:46:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 05:46:27] Running /usr/bin/apptainer --version
[2025-10-12 05:46:27] apptainer version 1.4.3-1.el9
[2025-10-12 05:46:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 05:46:27] c-211-5.aglt2.org
[2025-10-12 05:46:27] apptainer works
[2025-10-12 05:46:27] Set ATHENA_PROC_NUMBER=9
[2025-10-12 05:46:27] Set ATHENA_CORE_NUMBER=9
[2025-10-12 05:46:27] Starting ATLAS job with PandaID=6838912910
[2025-10-12 05:46:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:26:09]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:26:09] 2025-10-12 12:25:36,535 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1794999999993
[2025-10-12 08:26:09] 2025-10-12 12:25:36,563 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838912910/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:26:09] 2025-10-12 12:25:36,619 | INFO     | extracted standard info from prmon json
[2025-10-12 08:26:09] 2025-10-12 12:25:36,619 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 08:26:09] 2025-10-12 12:25:36,620 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 08:26:09] 2025-10-12 12:25:36,620 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 08:26:09] 2025-10-12 12:25:36,620 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 08:26:09] 2025-10-12 12:25:36,651 | INFO     | monitor loop #669: job 0:6838912910 is in state 'finished'
[2025-10-12 08:26:09] 2025-10-12 12:25:36,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 08:26:09] 2025-10-12 12:25:36,654 | INFO     | fitting pss+swap vs Time
[2025-10-12 08:26:09] 2025-10-12 12:25:36,655 | INFO     | sum of square deviations: 1177128660.3589737
[2025-10-12 08:26:09] 2025-10-12 12:25:36,656 | INFO     | sum of deviations: 18478507887.487186
[2025-10-12 08:26:09] 2025-10-12 12:25:36,656 | INFO     | mean x: 1760267156.5641026
[2025-10-12 08:26:09] 2025-10-12 12:25:36,656 | INFO     | mean y: 2547968.8012820515
[2025-10-12 08:26:09] 2025-10-12 12:25:36,656 | INFO     | -- intersect: -27630039387.227448
[2025-10-12 08:26:09] 2025-10-12 12:25:36,656 | INFO     | intersect: -27630039387.227448
[2025-10-12 08:26:09] 2025-10-12 12:25:36,657 | INFO     | chi2: 1.4275555608164887
[2025-10-12 08:26:09] 2025-10-12 12:25:36,657 | INFO     | sum of square deviations: 1067529655.3377464
[2025-10-12 08:26:09] 2025-10-12 12:25:36,658 | INFO     | sum of deviations: 17570707761.19205
[2025-10-12 08:26:09] 2025-10-12 12:25:36,658 | INFO     | mean x: 1760267004.066225
[2025-10-12 08:26:09] 2025-10-12 12:25:36,658 | INFO     | mean y: 2546710.880794702
[2025-10-12 08:26:09] 2025-10-12 12:25:36,658 | INFO     | -- intersect: -28970078972.600853
[2025-10-12 08:26:09] 2025-10-12 12:25:36,658 | INFO     | intersect: -28970078972.600853
[2025-10-12 08:26:09] 2025-10-12 12:25:36,659 | INFO     | chi2: 1.4289010401410465
[2025-10-12 08:26:09] 2025-10-12 12:25:36,659 | INFO     | current chi2=1.4289010401410465 (change=-0.09425057500306377 %)
[2025-10-12 08:26:09] 2025-10-12 12:25:36,659 | INFO     | right removable region: 150
[2025-10-12 08:26:09] 2025-10-12 12:25:36,659 | INFO     | sum of square deviations: 1067523555.3377464
[2025-10-12 08:26:09] 2025-10-12 12:25:36,660 | INFO     | sum of deviations: -5677728332.602646
[2025-10-12 08:26:09] 2025-10-12 12:25:36,660 | INFO     | mean x: 1760267309.066225
[2025-10-12 08:26:09] 2025-10-12 12:25:36,660 | INFO     | mean y: 2581115.9602649007
[2025-10-12 08:26:09] 2025-10-12 12:25:36,661 | INFO     | -- intersect: 9364734788.042461
[2025-10-12 08:26:09] 2025-10-12 12:25:36,661 | INFO     | intersect: 9364734788.042461
[2025-10-12 08:26:09] 2025-10-12 12:25:36,661 | INFO     | chi2: 0.03571768256546558
[2025-10-12 08:26:09] 2025-10-12 12:25:36,661 | INFO     | current chi2=0.03571768256546558 (change=97.49798301755507 %)
[2025-10-12 08:26:09] 2025-10-12 12:25:36,662 | INFO     | sum of square deviations: 964969224.1643844
[2025-10-12 08:26:09] 2025-10-12 12:25:36,662 | INFO     | sum of deviations: -3130137967.6575336
[2025-10-12 08:26:09] 2025-10-12 12:25:36,663 | INFO     | mean x: 1760267461.5479453
[2025-10-12 08:26:09] 2025-10-12 12:25:36,663 | INFO     | mean y: 2577315.308219178
[2025-10-12 08:26:09] 2025-10-12 12:25:36,663 | INFO     | -- intersect: 5712479638.249819
[2025-10-12 08:26:09] 2025-10-12 12:25:36,663 | INFO     | intersect: 5712479638.249819
[2025-10-12 08:26:09] 2025-10-12 12:25:36,663 | INFO     | chi2: 0.029246104884116886
[2025-10-12 08:26:09] 2025-10-12 12:25:36,663 | INFO     | current chi2=0.029246104884116886 (change=18.118694205558224 %)
[2025-10-12 08:26:09] 2025-10-12 12:25:36,664 | INFO     | left removable region: 20
[2025-10-12 08:26:09] 2025-10-12 12:25:36,664 | INFO     | sum of square deviations: 681212290.2230749
[2025-10-12 08:26:09] 2025-10-12 12:25:36,665 | INFO     | sum of deviations: 1023793544.1307691
[2025-10-12 08:26:09] 2025-10-12 12:25:36,665 | INFO     | mean x: 1760267583.5461538
[2025-10-12 08:26:09] 2025-10-12 12:25:36,665 | INFO     | mean y: 2569370.5615384616
[2025-10-12 08:26:09] 2025-10-12 12:25:36,665 | INFO     | -- intersect: -2642935729.4522557
[2025-10-12 08:26:09] 2025-10-12 12:25:36,665 | INFO     | intersect: -2642935729.4522557
[2025-10-12 08:26:09] 2025-10-12 12:25:36,665 | INFO     | chi2: 0.0003537110136906282
[2025-10-12 08:26:09] 2025-10-12 12:25:36,665 | INFO     | -- intersect: -2642935729.4522557
[2025-10-12 08:26:09] 2025-10-12 12:25:36,666 | INFO     | current memory leak: 1.50 B/s (using 130 data points, chi2=0.00)
[2025-10-12 08:26:09] 2025-10-12 12:25:36,666 | INFO     | could have reported an average CPU frequency of 2600 MHz (9 samples)
[2025-10-12 08:26:09] 2025-10-12 12:25:36,666 | INFO     | ..............................
[2025-10-12 08:26:09] 2025-10-12 12:25:36,667 | INFO     | . Timing measurements:
[2025-10-12 08:26:09] 2025-10-12 12:25:36,667 | INFO     | . get job = 0 s
[2025-10-12 08:26:09] 2025-10-12 12:25:36,667 | INFO     | . initial setup = 2 s
[2025-10-12 08:26:09] 2025-10-12 12:25:36,667 | INFO     | . payload setup = 6 s
[2025-10-12 08:26:09] 2025-10-12 12:25:36,667 | INFO     | . stage-in = 0 s
[2025-10-12 08:26:09] 2025-10-12 12:25:36,667 | INFO     | . payload execution = 9495 s
[2025-10-12 08:26:09] 2025-10-12 12:25:36,667 | INFO     | . stage-out = 1 s
[2025-10-12 08:26:09] 2025-10-12 12:25:36,667 | INFO     | . log creation = 0 s
[2025-10-12 08:26:09] 2025-10-12 12:25:36,667 | INFO     | ..............................
[2025-10-12 08:26:09] 2025-10-12 12:25:36,780 | INFO     | 
[2025-10-12 08:26:09] 2025-10-12 12:25:36,781 | INFO     | job summary report
[2025-10-12 08:26:09] 2025-10-12 12:25:36,781 | INFO     | --------------------------------------------------
[2025-10-12 08:26:09] 2025-10-12 12:25:36,781 | INFO     | PanDA job id: 6838912910
[2025-10-12 08:26:09] 2025-10-12 12:25:36,781 | INFO     | task id: 46676269
[2025-10-12 08:26:09] 2025-10-12 12:25:36,781 | INFO     | errors: (none)
[2025-10-12 08:26:09] 2025-10-12 12:25:36,781 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:26:09] 2025-10-12 12:25:36,781 | INFO     | pilot state: finished 
[2025-10-12 08:26:09] 2025-10-12 12:25:36,781 | INFO     | transexitcode: 0
[2025-10-12 08:26:09] 2025-10-12 12:25:36,781 | INFO     | exeerrorcode: 0
[2025-10-12 08:26:09] 2025-10-12 12:25:36,781 | INFO     | exeerrordiag: 
[2025-10-12 08:26:09] 2025-10-12 12:25:36,782 | INFO     | exitcode: 0
[2025-10-12 08:26:09] 2025-10-12 12:25:36,782 | INFO     | exitmsg: OK
[2025-10-12 08:26:09] 2025-10-12 12:25:36,782 | INFO     | cpuconsumptiontime: 54127 s
[2025-10-12 08:26:09] 2025-10-12 12:25:36,782 | INFO     | nevents: 400
[2025-10-12 08:26:09] 2025-10-12 12:25:36,782 | INFO     | neventsw: 0
[2025-10-12 08:26:09] 2025-10-12 12:25:36,782 | INFO     | pid: 2388218
[2025-10-12 08:26:09] 2025-10-12 12:25:36,782 | INFO     | pgrp: 2388218
[2025-10-12 08:26:09] 2025-10-12 12:25:36,782 | INFO     | corecount: 9
[2025-10-12 08:26:09] 2025-10-12 12:25:36,782 | INFO     | event service: False
[2025-10-12 08:26:09] 2025-10-12 12:25:36,782 | INFO     | sizes: {0: 2348634, 1: 2348833, 2: 2348833, 6: 2349123, 12: 2349151, 9505: 2377802, 9506: 2377929, 9508: 2386983, 9510: 2387039, 9519: 2387297}
[2025-10-12 08:26:09] 2025-10-12 12:25:36,783 | INFO     | --------------------------------------------------
[2025-10-12 08:26:09] 2025-10-12 12:25:36,783 | INFO     | 
[2025-10-12 08:26:09] 2025-10-12 12:25:36,783 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 08:26:09] 2025-10-12 12:25:36,808 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,808 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,808 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,809 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,810 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,810 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,810 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:26:09] 2025-10-12 12:25:36,810 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,810 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:26:09] 2025-10-12 12:25:36,810 | INFO     | job 6838912910 has completed (purged errors)
[2025-10-12 08:26:09] 2025-10-12 12:25:36,810 | INFO     | overall cleanup function is called
[2025-10-12 08:26:09] 2025-10-12 12:25:37,820 | INFO     | --- collectZombieJob: --- 10, [2388218]
[2025-10-12 08:26:09] 2025-10-12 12:25:37,822 | INFO     | zombie collector waiting for pid 2388218
[2025-10-12 08:26:09] 2025-10-12 12:25:37,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:26:09] 2025-10-12 12:25:37,823 | INFO     | collected zombie processes
[2025-10-12 08:26:09] 2025-10-12 12:25:37,823 | INFO     | will attempt to kill all subprocesses of pid=2388218
[2025-10-12 08:26:09] 2025-10-12 12:25:38,108 | INFO     | process IDs to be killed: [2388218] (in reverse order)
[2025-10-12 08:26:09] 2025-10-12 12:25:38,192 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:26:09] 2025-10-12 12:25:38,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:26:09] 2025-10-12 12:25:38,209 | INFO     | did not find any defunct processes belonging to 2388218
[2025-10-12 08:26:09] 2025-10-12 12:25:38,219 | INFO     | did not find any defunct processes belonging to 2388218
[2025-10-12 08:26:09] 2025-10-12 12:25:38,220 | INFO     | ready for new job
[2025-10-12 08:26:09] 2025-10-12 12:25:38,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:26:09] 2025-10-12 12:25:38,223 | INFO     | ***************************************
[2025-10-12 08:26:09] 2025-10-12 12:25:38,223 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:26:09] 2025-10-12 12:25:38,223 | INFO     | ***************************************
[2025-10-12 08:26:09] 2025-10-12 12:25:38,223 | INFO     | 
[2025-10-12 08:26:09] 2025-10-12 12:25:38,226 | INFO     | architecture information:
[2025-10-12 08:26:09] 2025-10-12 12:25:38,226 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:26:09] 2025-10-12 12:25:38,276 | INFO     | cat /etc/os-release:
[2025-10-12 08:26:09] NAME="CentOS Linux"
[2025-10-12 08:26:09] VERSION="7 (Core)"
[2025-10-12 08:26:09] ID="centos"
[2025-10-12 08:26:09] ID_LIKE="rhel fedora"
[2025-10-12 08:26:09] VERSION_ID="7"
[2025-10-12 08:26:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:26:09] ANSI_COLOR="0;31"
[2025-10-12 08:26:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:26:09] HOME_URL="https://www.centos.org/"
[2025-10-12 08:26:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:26:09] 
[2025-10-12 08:26:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:26:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:26:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:26:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:26:09] 
[2025-10-12 08:26:09] 2025-10-12 12:25:38,277 | INFO     | ***************************************
[2025-10-12 08:26:09] 2025-10-12 12:25:38,780 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 08:26:09] 2025-10-12 12:25:38,803 | INFO     | sufficient remaining disk space (52142538752 B)
[2025-10-12 08:26:09] 2025-10-12 12:25:38,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:26:09] 2025-10-12 12:25:38,803 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:26:09] 2025-10-12 12:25:38,803 | INFO     | update_server=False
[2025-10-12 08:26:09] 2025-10-12 12:25:38,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:26:09] 2025-10-12 12:25:38,804 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:26:09] 2025-10-12 12:25:38,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:26:09] 2025-10-12 12:25:39,158 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 08:26:09] 2025-10-12 12:25:39,158 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 08:26:09] 2025-10-12 12:25:39,159 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:26:09] 2025-10-12 12:25:39,159 | INFO     | will abort loop
[2025-10-12 08:26:09] 2025-10-12 12:25:39,715 | INFO     | all data control threads have been joined
[2025-10-12 08:26:09] 2025-10-12 12:25:39,808 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:39,968 | INFO     | all payload control threads have been joined
[2025-10-12 08:26:09] 2025-10-12 12:25:40,062 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:40,109 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:40,111 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:40,164 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:40,180 | INFO     | all job control threads have been joined
[2025-10-12 08:26:09] 2025-10-12 12:25:40,201 | INFO     | [job] validate thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:40,318 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:40,691 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:40,720 | INFO     | [data] control thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:40,811 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:40,819 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:40,974 | INFO     | [payload] control thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:41,186 | INFO     | [job] control thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:41,361 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:41,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:26:09] 2025-10-12 12:25:42,801 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:42,817 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:26:09] 2025-10-12 12:25:56,062 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:26:09] 2025-10-12 12:25:57,273 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140634894055232)>', '<ExcThread(monitor, started 140634123917056)>']
[2025-10-12 08:26:09] 2025-10-12 12:26:02,299 | INFO     | all workflow threads have been joined
[2025-10-12 08:26:09] 2025-10-12 12:26:02,300 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:26:09] 2025-10-12 12:26:02,301 | INFO     | traces error code: 0
[2025-10-12 08:26:09] 2025-10-12 12:26:02,301 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:26:09] 2025-10-12 12:26:08,977 | INFO     | PID=2372997 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:26:09] 2025-10-12 12:26:08,977 | INFO     | .. there are 8 such processes running
[2025-10-12 08:26:09] 2025-10-12 12:26:08,977 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:26:09] 2025-10-12 12:26:08,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:26:09] 2025-10-12 12:26:08,978 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:26:09] 2025-10-12 12:26:08,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:26:09] 2025-10-12 12:26:08,978 | INFO     | [monitor] control thread has ended
[2025-10-12 08:26:09] 2025-10-12 12:26:09,255 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:26:09] 2025-10-12 12:26:09,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:26:09] 2025-10-12 12:26:09,268 [wrapper] pilotpid: 2372997
[2025-10-12 08:26:09] 2025-10-12 12:26:09,272 [wrapper] Pilot exit status: 0
[2025-10-12 08:26:09] 2025-10-12 12:26:09,290 [wrapper] pandaids: 6838912910 6838912910
[2025-10-12 08:26:09] 2025-10-12 12:26:09,374 [wrapper] cleanup supervisor_pilot 2598202 2372998
[2025-10-12 08:26:09] 2025-10-12 12:26:09,380 [wrapper] Test setup, not cleaning
[2025-10-12 08:26:09] 2025-10-12 12:26:09,384 [wrapper] apfmon messages muted
[2025-10-12 08:26:09] 2025-10-12 12:26:09,387 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:26:09] 2025-10-12 12:26:09,391 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:26:09]  *** Error codes and diagnostics ***
[2025-10-12 08:26:09]     "exeErrorCode": 0,
[2025-10-12 08:26:09]     "exeErrorDiag": "",
[2025-10-12 08:26:09]     "pilotErrorCode": 0,
[2025-10-12 08:26:09]     "pilotErrorDiag": "",
[2025-10-12 08:26:09]  *** Listing of results directory ***
[2025-10-12 08:26:09] total 633488
[2025-10-12 08:26:09] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-12 08:26:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 16:36 pilot3.tar.gz
[2025-10-12 08:26:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 16:47 queuedata.json
[2025-10-12 08:26:09] -rwx------. 1 boincer umatlas     36292 Oct 11 16:47 runpilot2-wrapper.sh
[2025-10-12 08:26:09] -rw-r--r--. 1 boincer umatlas       100 Oct 12 01:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:26:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 01:26 run_atlas
[2025-10-12 08:26:09] -rw-r--r--. 1 boincer umatlas       105 Oct 12 01:26 job.xml
[2025-10-12 08:26:09] -rw-r--r--. 3 boincer umatlas 219906708 Oct 12 01:26 EVNT.46676267._000917.pool.root.1
[2025-10-12 08:26:09] -rw-r--r--. 3 boincer umatlas 219906708 Oct 12 01:26 ATLAS.root_0
[2025-10-12 08:26:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 01:26 start_atlas.sh
[2025-10-12 08:26:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 01:26 shared
[2025-10-12 08:26:09] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 01:26 input.tar.gz
[2025-10-12 08:26:09] -rw-r--r--. 1 boincer umatlas         0 Oct 12 01:26 boinc_lockfile
[2025-10-12 08:26:09] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 05:46 pandaJob.out
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas    975536 Oct 12 05:46 agis_schedconf.cvmfs.json
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas   1560580 Oct 12 05:46 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:26:09] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 08:20 init_data.xml
[2025-10-12 08:26:09] -rw-r--r--. 1 boincer umatlas       532 Oct 12 08:24 boinc_task_state.xml
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas 201494631 Oct 12 08:24 HITS.46676269._064761.pool.root.1
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas      1040 Oct 12 08:25 memory_monitor_summary.json
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas        96 Oct 12 08:25 pilot_heartbeat.json
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas    409540 Oct 12 08:25 log.46676269._064761.job.log.tgz.1
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas      7810 Oct 12 08:25 heartbeat.json
[2025-10-12 08:26:09] -rw-r--r--. 1 boincer umatlas        29 Oct 12 08:26 wrapper_checkpoint.txt
[2025-10-12 08:26:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 08:26 boinc_mmap_file
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas       822 Oct 12 08:26 pilotlog.txt
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas   1328183 Oct 12 08:26 log.46676269._064761.job.log.1
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas       357 Oct 12 08:26 output.list
[2025-10-12 08:26:09] -rw-r--r--. 1 boincer umatlas       620 Oct 12 08:26 runtime_log
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas   1761280 Oct 12 08:26 result.tar.gz
[2025-10-12 08:26:09] -rw-r--r--. 1 boincer umatlas      8783 Oct 12 08:26 runtime_log.err
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas       776 Oct 12 08:26 IVWNDmEgvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9ZhNDmOCOjCn.diag
[2025-10-12 08:26:09] -rw-r--r--. 1 boincer umatlas     23423 Oct 12 08:26 stderr.txt
[2025-10-12 08:26:09] HITS file was successfully produced:
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas 201494631 Oct 12 08:24 shared/HITS.pool.root.1
[2025-10-12 08:26:09]  *** Contents of shared directory: ***
[2025-10-12 08:26:09] total 413832
[2025-10-12 08:26:09] -rw-r--r--. 3 boincer umatlas 219906708 Oct 12 01:26 ATLAS.root_0
[2025-10-12 08:26:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 01:26 start_atlas.sh
[2025-10-12 08:26:09] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 01:26 input.tar.gz
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas 201494631 Oct 12 08:24 HITS.pool.root.1
[2025-10-12 08:26:09] -rw-------. 1 boincer umatlas   1761280 Oct 12 08:26 result.tar.gz
08:26:11 (2365638): run_atlas exited; CPU time 54222.095864
08:26:11 (2365638): called boinc_finish(0)

</stderr_txt>
]]>

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