Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:22 (3656369): wrapper (7.7.26015): starting
00:00:22 (3656369): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:00:22] Arguments: --nthreads 12
[2025-10-12 00:00:22] Threads: 12
[2025-10-12 00:00:22] Checking for CVMFS
[2025-10-12 00:00:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:00:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:00:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:00:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:00:25] 2.13.2.0 129071 117071 190552 151606 0 26 37487186 39288833 9757 16776704 1 71961690 99.741 39608573 31544 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 00:00:25] CVMFS is ok
[2025-10-12 00:00:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:00:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:00:25] Further information can be found at the LHC@home message board.
[2025-10-12 00:00:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:00:25] Checking for apptainer binary...
[2025-10-12 00:00:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:00:25] Running /usr/bin/apptainer --version
[2025-10-12 00:00:25] apptainer version 1.4.3-1.el9
[2025-10-12 00:00:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:00:25] c-210-3.aglt2.org
[2025-10-12 00:00:25] apptainer works
[2025-10-12 00:00:25] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:00:25] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:00:26] Starting ATLAS job with PandaID=6838852646
[2025-10-12 00:00:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:44:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:44:46] 2025-10-12 10:43:53,830 | INFO     | sum of deviations: 469747551781.58014
[2025-10-12 06:44:46] 2025-10-12 10:43:53,831 | INFO     | mean x: 1760253835.6335878
[2025-10-12 06:44:46] 2025-10-12 10:43:53,831 | INFO     | mean y: 2550994.1984732826
[2025-10-12 06:44:46] 2025-10-12 10:43:53,831 | INFO     | -- intersect: -43930295292.01472
[2025-10-12 06:44:46] 2025-10-12 10:43:53,831 | INFO     | intersect: -43930295292.01472
[2025-10-12 06:44:46] 2025-10-12 10:43:53,832 | INFO     | chi2: 8.197427031156915
[2025-10-12 06:44:46] 2025-10-12 10:43:53,833 | INFO     | sum of square deviations: 18112135561.203575
[2025-10-12 06:44:46] 2025-10-12 10:43:53,853 | INFO     | sum of deviations: 489088042352.36053
[2025-10-12 06:44:46] 2025-10-12 10:43:53,853 | INFO     | mean x: 1760253683.1417525
[2025-10-12 06:44:46] 2025-10-12 10:43:53,853 | INFO     | mean y: 2555094.175257732
[2025-10-12 06:44:46] 2025-10-12 10:43:53,853 | INFO     | -- intersect: -47530162680.71991
[2025-10-12 06:44:46] 2025-10-12 10:43:53,854 | INFO     | intersect: -47530162680.71991
[2025-10-12 06:44:46] 2025-10-12 10:43:53,854 | INFO     | chi2: 7.486362613239814
[2025-10-12 06:44:46] 2025-10-12 10:43:53,855 | INFO     | current chi2=7.486362613239814 (change=8.674239065678476 %)
[2025-10-12 06:44:46] 2025-10-12 10:43:53,855 | INFO     | right removable region: 387
[2025-10-12 06:44:46] 2025-10-12 10:43:53,855 | INFO     | sum of square deviations: 18111863318.72143
[2025-10-12 06:44:46] 2025-10-12 10:43:53,861 | INFO     | sum of deviations: 349072368389.30945
[2025-10-12 06:44:46] 2025-10-12 10:43:53,862 | INFO     | mean x: 1760253988.1546392
[2025-10-12 06:44:46] 2025-10-12 10:43:53,862 | INFO     | mean y: 2576907.744845361
[2025-10-12 06:44:46] 2025-10-12 10:43:53,862 | INFO     | -- intersect: -33923034046.74659
[2025-10-12 06:44:46] 2025-10-12 10:43:53,862 | INFO     | intersect: -33923034046.74659
[2025-10-12 06:44:46] 2025-10-12 10:43:53,913 | INFO     | chi2: 4.8893237502776685
[2025-10-12 06:44:46] 2025-10-12 10:43:53,914 | INFO     | current chi2=4.8893237502776685 (change=40.35538551676951 %)
[2025-10-12 06:44:46] 2025-10-12 10:43:53,914 | INFO     | sum of square deviations: 17420435929.853817
[2025-10-12 06:44:46] 2025-10-12 10:43:53,992 | INFO     | sum of deviations: 262721717142.94763
[2025-10-12 06:44:46] 2025-10-12 10:43:53,993 | INFO     | mean x: 1760254140.6762402
[2025-10-12 06:44:46] 2025-10-12 10:43:53,993 | INFO     | mean y: 2595947.7415143605
[2025-10-12 06:44:46] 2025-10-12 10:43:53,993 | INFO     | -- intersect: -26544213346.159214
[2025-10-12 06:44:46] 2025-10-12 10:43:53,993 | INFO     | intersect: -26544213346.159214
[2025-10-12 06:44:46] 2025-10-12 10:43:53,994 | INFO     | chi2: 3.364942852155272
[2025-10-12 06:44:46] 2025-10-12 10:43:53,994 | INFO     | current chi2=3.364942852155272 (change=31.177745143913327 %)
[2025-10-12 06:44:46] 2025-10-12 10:43:53,995 | INFO     | sum of square deviations: 16746845949.513157
[2025-10-12 06:44:46] 2025-10-12 10:43:54,037 | INFO     | sum of deviations: 198196928707.78842
[2025-10-12 06:44:46] 2025-10-12 10:43:54,037 | INFO     | mean x: 1760254293.1957672
[2025-10-12 06:44:46] 2025-10-12 10:43:54,038 | INFO     | mean y: 2610555.3677248675
[2025-10-12 06:44:46] 2025-10-12 10:43:54,038 | INFO     | -- intersect: -20829789510.164738
[2025-10-12 06:44:46] 2025-10-12 10:43:54,038 | INFO     | intersect: -20829789510.164738
[2025-10-12 06:44:46] 2025-10-12 10:43:54,064 | INFO     | chi2: 2.5494298862361955
[2025-10-12 06:44:46] 2025-10-12 10:43:54,064 | INFO     | current chi2=2.5494298862361955 (change=24.235566598010244 %)
[2025-10-12 06:44:46] 2025-10-12 10:43:54,064 | INFO     | left removable region: 30
[2025-10-12 06:44:46] 2025-10-12 10:43:54,065 | INFO     | sum of square deviations: 14107541002.308123
[2025-10-12 06:44:46] 2025-10-12 10:43:54,101 | INFO     | sum of deviations: 82083028215.2241
[2025-10-12 06:44:46] 2025-10-12 10:43:54,101 | INFO     | mean x: 1760254567.7535014
[2025-10-12 06:44:46] 2025-10-12 10:43:54,101 | INFO     | mean y: 2649282.8207282913
[2025-10-12 06:44:46] 2025-10-12 10:43:54,102 | INFO     | -- intersect: -10239179915.283205
[2025-10-12 06:44:46] 2025-10-12 10:43:54,102 | INFO     | intersect: -10239179915.283205
[2025-10-12 06:44:46] 2025-10-12 10:43:54,102 | INFO     | chi2: 0.5370631176918494
[2025-10-12 06:44:46] 2025-10-12 10:43:54,103 | INFO     | -- intersect: -10239179915.283205
[2025-10-12 06:44:46] 2025-10-12 10:43:54,103 | INFO     | current memory leak: 5.82 B/s (using 357 data points, chi2=0.54)
[2025-10-12 06:44:46] 2025-10-12 10:43:54,189 | INFO     | could have reported an average CPU frequency of 2597 MHz (17 samples)
[2025-10-12 06:44:46] 2025-10-12 10:43:54,189 | INFO     | ..............................
[2025-10-12 06:44:46] 2025-10-12 10:43:54,189 | INFO     | . Timing measurements:
[2025-10-12 06:44:46] 2025-10-12 10:43:54,190 | INFO     | . get job = 0 s
[2025-10-12 06:44:46] 2025-10-12 10:43:54,190 | INFO     | . initial setup = 7 s
[2025-10-12 06:44:46] 2025-10-12 10:43:54,190 | INFO     | . payload setup = 52 s
[2025-10-12 06:44:46] 2025-10-12 10:43:54,190 | INFO     | . stage-in = 0 s
[2025-10-12 06:44:46] 2025-10-12 10:43:54,190 | INFO     | . payload execution = 23958 s
[2025-10-12 06:44:46] 2025-10-12 10:43:54,190 | INFO     | . stage-out = 10 s
[2025-10-12 06:44:46] 2025-10-12 10:43:54,190 | INFO     | . log creation = 2 s
[2025-10-12 06:44:46] 2025-10-12 10:43:54,190 | INFO     | ..............................
[2025-10-12 06:44:46] 2025-10-12 10:43:55,208 | INFO     | time since job start (24125s) is within the limit (172800.0s)
[2025-10-12 06:44:46] 2025-10-12 10:43:55,990 | INFO     | 
[2025-10-12 06:44:46] 2025-10-12 10:43:55,991 | INFO     | job summary report
[2025-10-12 06:44:46] 2025-10-12 10:43:55,991 | INFO     | --------------------------------------------------
[2025-10-12 06:44:46] 2025-10-12 10:43:55,991 | INFO     | PanDA job id: 6838852646
[2025-10-12 06:44:46] 2025-10-12 10:43:55,991 | INFO     | task id: 46676269
[2025-10-12 06:44:46] 2025-10-12 10:43:55,991 | INFO     | errors: (none)
[2025-10-12 06:44:46] 2025-10-12 10:43:55,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:44:46] 2025-10-12 10:43:55,992 | INFO     | pilot state: finished 
[2025-10-12 06:44:46] 2025-10-12 10:43:55,992 | INFO     | transexitcode: 0
[2025-10-12 06:44:46] 2025-10-12 10:43:55,992 | INFO     | exeerrorcode: 0
[2025-10-12 06:44:46] 2025-10-12 10:43:55,992 | INFO     | exeerrordiag: 
[2025-10-12 06:44:46] 2025-10-12 10:43:55,992 | INFO     | exitcode: 0
[2025-10-12 06:44:46] 2025-10-12 10:43:55,992 | INFO     | exitmsg: OK
[2025-10-12 06:44:46] 2025-10-12 10:43:55,992 | INFO     | cpuconsumptiontime: 54596 s
[2025-10-12 06:44:46] 2025-10-12 10:43:55,992 | INFO     | nevents: 400
[2025-10-12 06:44:46] 2025-10-12 10:43:55,993 | INFO     | neventsw: 0
[2025-10-12 06:44:46] 2025-10-12 10:43:55,993 | INFO     | pid: 3668866
[2025-10-12 06:44:46] 2025-10-12 10:43:55,993 | INFO     | pgrp: 3668866
[2025-10-12 06:44:46] 2025-10-12 10:43:55,993 | INFO     | corecount: 12
[2025-10-12 06:44:46] 2025-10-12 10:43:55,993 | INFO     | event service: False
[2025-10-12 06:44:46] 2025-10-12 10:43:55,993 | INFO     | sizes: {0: 2348630, 1: 2348686, 2: 2348742, 3: 2348941, 5: 2348941, 15: 2348997, 26: 2349153, 36: 2349443, 37: 2349471, 24016: 2384492, 24027: 2393490, 24031: 2393
[2025-10-12 06:44:46] 2025-10-12 10:43:55,993 | INFO     | --------------------------------------------------
[2025-10-12 06:44:46] 2025-10-12 10:43:55,993 | INFO     | 
[2025-10-12 06:44:46] 2025-10-12 10:43:55,994 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 06:44:46] 2025-10-12 10:43:56,431 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,431 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,432 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,432 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,432 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,432 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,433 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,433 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,433 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,433 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:44:46] 2025-10-12 10:43:56,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,434 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:44:46] 2025-10-12 10:43:56,434 | INFO     | job 6838852646 has completed (purged errors)
[2025-10-12 06:44:46] 2025-10-12 10:43:56,434 | INFO     | overall cleanup function is called
[2025-10-12 06:44:46] 2025-10-12 10:43:57,728 | INFO     | --- collectZombieJob: --- 10, [3668866]
[2025-10-12 06:44:46] 2025-10-12 10:43:57,729 | INFO     | zombie collector waiting for pid 3668866
[2025-10-12 06:44:46] 2025-10-12 10:43:57,729 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:44:46] 2025-10-12 10:43:57,729 | INFO     | collected zombie processes
[2025-10-12 06:44:46] 2025-10-12 10:43:57,729 | INFO     | will attempt to kill all subprocesses of pid=3668866
[2025-10-12 06:44:46] 2025-10-12 10:44:00,260 | INFO     | PID=3661629 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:44:46] 2025-10-12 10:44:00,261 | INFO     | .. there are 7 such processes running
[2025-10-12 06:44:46] 2025-10-12 10:44:00,292 | INFO     | process IDs to be killed: [3668866] (in reverse order)
[2025-10-12 06:44:46] 2025-10-12 10:44:00,374 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:44:46] 2025-10-12 10:44:00,375 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:44:46] 2025-10-12 10:44:00,383 | INFO     | did not find any defunct processes belonging to 3668866
[2025-10-12 06:44:46] 2025-10-12 10:44:00,392 | INFO     | did not find any defunct processes belonging to 3668866
[2025-10-12 06:44:46] 2025-10-12 10:44:00,393 | INFO     | ready for new job
[2025-10-12 06:44:46] 2025-10-12 10:44:00,393 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:44:46] 2025-10-12 10:44:00,419 | INFO     | ***************************************
[2025-10-12 06:44:46] 2025-10-12 10:44:00,419 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:44:46] 2025-10-12 10:44:00,419 | INFO     | ***************************************
[2025-10-12 06:44:46] 2025-10-12 10:44:00,506 | INFO     | 
[2025-10-12 06:44:46] 2025-10-12 10:44:00,508 | INFO     | architecture information:
[2025-10-12 06:44:46] 2025-10-12 10:44:00,549 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:44:46] 2025-10-12 10:44:00,635 | INFO     | cat /etc/os-release:
[2025-10-12 06:44:46] NAME="CentOS Linux"
[2025-10-12 06:44:46] VERSION="7 (Core)"
[2025-10-12 06:44:46] ID="centos"
[2025-10-12 06:44:46] ID_LIKE="rhel fedora"
[2025-10-12 06:44:46] VERSION_ID="7"
[2025-10-12 06:44:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:44:46] ANSI_COLOR="0;31"
[2025-10-12 06:44:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:44:46] HOME_URL="https://www.centos.org/"
[2025-10-12 06:44:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:44:46] 
[2025-10-12 06:44:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:44:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:44:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:44:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:44:46] 
[2025-10-12 06:44:46] 2025-10-12 10:44:00,635 | INFO     | ***************************************
[2025-10-12 06:44:46] 2025-10-12 10:44:01,140 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 06:44:46] 2025-10-12 10:44:01,390 | INFO     | sufficient remaining disk space (52687798272 B)
[2025-10-12 06:44:46] 2025-10-12 10:44:01,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:44:46] 2025-10-12 10:44:01,391 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:44:46] 2025-10-12 10:44:01,391 | INFO     | update_server=False
[2025-10-12 06:44:46] 2025-10-12 10:44:01,391 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:44:46] 2025-10-12 10:44:01,391 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:44:46] 2025-10-12 10:44:01,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:44:46] 2025-10-12 10:44:01,625 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 06:44:46] 2025-10-12 10:44:01,626 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 06:44:46] 2025-10-12 10:44:01,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:44:46] 2025-10-12 10:44:01,632 | INFO     | will abort loop
[2025-10-12 06:44:46] 2025-10-12 10:44:01,639 | INFO     | all data control threads have been joined
[2025-10-12 06:44:46] 2025-10-12 10:44:01,948 | INFO     | all payload control threads have been joined
[2025-10-12 06:44:46] 2025-10-12 10:44:02,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:44:46] 2025-10-12 10:44:02,397 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:02,420 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:02,447 | INFO     | all job control threads have been joined
[2025-10-12 06:44:46] 2025-10-12 10:44:02,499 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:02,646 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:02,681 | INFO     | [data] control thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:02,688 | INFO     | [job] validate thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:02,723 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:02,769 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:02,866 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:02,955 | INFO     | [payload] control thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:03,363 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:03,454 | INFO     | [job] control thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:03,740 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:03,749 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:04,390 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:05,400 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:44:46] 2025-10-12 10:44:33,098 | INFO     | PID=3661629 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:44:46] 2025-10-12 10:44:33,098 | INFO     | .. there are 7 such processes running
[2025-10-12 06:44:46] 2025-10-12 10:44:33,099 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:44:46] 2025-10-12 10:44:33,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:44:46] 2025-10-12 10:44:33,100 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:44:46] 2025-10-12 10:44:36,135 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:44:46] 2025-10-12 10:44:37,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569601816384)>', '<ExcThread(monitor, started 140568952817408)>']
[2025-10-12 06:44:46] 2025-10-12 10:44:38,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:44:46] 2025-10-12 10:44:38,130 | INFO     | [monitor] control thread has ended
[2025-10-12 06:44:46] 2025-10-12 10:44:42,816 | INFO     | all workflow threads have been joined
[2025-10-12 06:44:46] 2025-10-12 10:44:42,817 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:44:46] 2025-10-12 10:44:42,817 | INFO     | traces error code: 0
[2025-10-12 06:44:46] 2025-10-12 10:44:42,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:44:46] 2025-10-12 10:44:45,441 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:44:46] 2025-10-12 10:44:45,500 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:44:46] 2025-10-12 10:44:45,516 [wrapper] pilotpid: 3661629
[2025-10-12 06:44:46] 2025-10-12 10:44:45,537 [wrapper] Pilot exit status: 0
[2025-10-12 06:44:46] 2025-10-12 10:44:45,726 [wrapper] pandaids: 6838852646
[2025-10-12 06:44:46] 2025-10-12 10:44:46,242 [wrapper] cleanup supervisor_pilot   14089 3661630
[2025-10-12 06:44:46] 2025-10-12 10:44:46,309 [wrapper] Test setup, not cleaning
[2025-10-12 06:44:46] 2025-10-12 10:44:46,370 [wrapper] apfmon messages muted
[2025-10-12 06:44:46] 2025-10-12 10:44:46,423 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:44:46] 2025-10-12 10:44:46,489 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:44:46]  *** Error codes and diagnostics ***
[2025-10-12 06:44:46]     "exeErrorCode": 0,
[2025-10-12 06:44:46]     "exeErrorDiag": "",
[2025-10-12 06:44:46]     "pilotErrorCode": 0,
[2025-10-12 06:44:46]     "pilotErrorDiag": "",
[2025-10-12 06:44:46]  *** Listing of results directory ***
[2025-10-12 06:44:46] total 414464
[2025-10-12 06:44:46] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 16:36 pilot3.tar.gz
[2025-10-12 06:44:46] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 16:38 queuedata.json
[2025-10-12 06:44:46] -rwx------. 1 boincer umatlas     36292 Oct 11 16:38 runpilot2-wrapper.sh
[2025-10-12 06:44:46] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:44:46] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:00 run_atlas
[2025-10-12 06:44:46] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:00 job.xml
[2025-10-12 06:44:46] -rw-r--r--. 2 boincer umatlas 220121035 Oct 12 00:00 EVNT.46676267._002589.pool.root.1
[2025-10-12 06:44:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:00 start_atlas.sh
[2025-10-12 06:44:46] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:00 shared
[2025-10-12 06:44:46] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:00 input.tar.gz
[2025-10-12 06:44:46] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:00 boinc_lockfile
[2025-10-12 06:44:46] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:00 pandaJob.out
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas    975512 Oct 12 00:01 agis_schedconf.cvmfs.json
[2025-10-12 06:44:46] drwx------. 5 boincer umatlas      4096 Oct 12 00:01 pilot3
[2025-10-12 06:44:46] -rw-r--r--. 1 boincer umatlas      6660 Oct 12 06:38 init_data.xml
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas 192968697 Oct 12 06:42 HITS.46676269._064428.pool.root.1
[2025-10-12 06:44:46] -rw-r--r--. 1 boincer umatlas       531 Oct 12 06:42 boinc_task_state.xml
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas      1042 Oct 12 06:43 memory_monitor_summary.json
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas   1560580 Oct 12 06:43 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas    656812 Oct 12 06:43 log.46676269._064428.job.log.tgz.1
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas      7832 Oct 12 06:43 heartbeat.json
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas        95 Oct 12 06:44 pilot_heartbeat.json
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas      5009 Oct 12 06:44 pilotlog.txt
[2025-10-12 06:44:46] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 06:44 boinc_mmap_file
[2025-10-12 06:44:46] -rw-r--r--. 1 boincer umatlas        28 Oct 12 06:44 wrapper_checkpoint.txt
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas   3053548 Oct 12 06:44 log.46676269._064428.job.log.1
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas       357 Oct 12 06:44 output.list
[2025-10-12 06:44:46] -rw-r--r--. 1 boincer umatlas       620 Oct 12 06:44 runtime_log
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas   3727360 Oct 12 06:44 result.tar.gz
[2025-10-12 06:44:46] -rw-r--r--. 1 boincer umatlas      8701 Oct 12 06:44 runtime_log.err
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas       656 Oct 12 06:44 qA1KDmQXvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEYhNDmiZVRMm.diag
[2025-10-12 06:44:46] -rw-r--r--. 1 boincer umatlas     21222 Oct 12 06:44 stderr.txt
[2025-10-12 06:44:46] HITS file was successfully produced:
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas 192968697 Oct 12 06:42 shared/HITS.pool.root.1
[2025-10-12 06:44:46]  *** Contents of shared directory: ***
[2025-10-12 06:44:46] total 407632
[2025-10-12 06:44:46] -rw-r--r--. 2 boincer umatlas 220121035 Oct 12 00:00 ATLAS.root_0
[2025-10-12 06:44:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:00 start_atlas.sh
[2025-10-12 06:44:46] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 00:00 input.tar.gz
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas 192968697 Oct 12 06:42 HITS.pool.root.1
[2025-10-12 06:44:46] -rw-------. 1 boincer umatlas   3727360 Oct 12 06:44 result.tar.gz
06:44:48 (3656369): run_atlas exited; CPU time 55084.462316
06:44:48 (3656369): called boinc_finish(0)

</stderr_txt>
]]>

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