Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:46:02 (2607493): wrapper (7.7.26015): starting
18:46:02 (2607493): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 18:46:02] Arguments: --nthreads 3
[2025-10-12 18:46:02] Threads: 3
[2025-10-12 18:46:02] Checking for CVMFS
[2025-10-12 18:46:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:46:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:46:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:46:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:46:03] 2.9.2.0 1204004 4499 82404 151627 0 56 4311104 36864001 0 130560 0 3481131 99.990 154768 778 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 18:46:03] CVMFS is ok
[2025-10-12 18:46:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:46:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:46:03] Further information can be found at the LHC@home message board.
[2025-10-12 18:46:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:46:03] Checking for apptainer binary...
[2025-10-12 18:46:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:46:03] Running /usr/bin/apptainer --version
[2025-10-12 18:46:03] apptainer version 1.4.1-1.1
[2025-10-12 18:46:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:46:03] thA312
[2025-10-12 18:46:03] apptainer works
[2025-10-12 18:46:03] Set ATHENA_PROC_NUMBER=3
[2025-10-12 18:46:03] Set ATHENA_CORE_NUMBER=3
[2025-10-12 18:46:03] Starting ATLAS job with PandaID=6838852913
[2025-10-12 18:46:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:11:37]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:11:37] 2025-10-12 18:11:07,339 | INFO     | executing command: cat /etc/os-release
[2025-10-12 20:11:37] 2025-10-12 18:11:07,349 | INFO     | cat /etc/os-release:
[2025-10-12 20:11:37] NAME="CentOS Linux"
[2025-10-12 20:11:37] VERSION="7 (Core)"
[2025-10-12 20:11:37] ID="centos"
[2025-10-12 20:11:37] ID_LIKE="rhel fedora"
[2025-10-12 20:11:37] VERSION_ID="7"
[2025-10-12 20:11:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:11:37] ANSI_COLOR="0;31"
[2025-10-12 20:11:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:11:37] HOME_URL="https://www.centos.org/"
[2025-10-12 20:11:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:11:37] 
[2025-10-12 20:11:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:11:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:11:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:11:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:11:37] 
[2025-10-12 20:11:37] 2025-10-12 18:11:07,349 | INFO     | ***************************************
[2025-10-12 20:11:37] 2025-10-12 18:11:07,852 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 20:11:37] 2025-10-12 18:11:07,865 | INFO     | sufficient remaining disk space (355479846912 B)
[2025-10-12 20:11:37] 2025-10-12 18:11:07,866 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:11:37] 2025-10-12 18:11:07,866 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:11:37] 2025-10-12 18:11:07,866 | INFO     | update_server=False
[2025-10-12 20:11:37] 2025-10-12 18:11:07,866 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:11:37] 2025-10-12 18:11:07,866 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:11:37] 2025-10-12 18:11:07,989 | INFO     | all payload control threads have been joined
[2025-10-12 20:11:37] 2025-10-12 18:11:08,207 | INFO     | all job control threads have been joined
[2025-10-12 20:11:37] 2025-10-12 18:11:08,318 | INFO     | all data control threads have been joined
[2025-10-12 20:11:37] 2025-10-12 18:11:08,596 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:11:37] 2025-10-12 18:11:08,597 | INFO     | aborting loop
[2025-10-12 20:11:37] 2025-10-12 18:11:08,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:11:37] 2025-10-12 18:11:08,871 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:08,872 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:08,995 | INFO     | [payload] control thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:09,057 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:09,180 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:09,213 | INFO     | [job] control thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:09,321 | INFO     | [data] control thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:09,558 | INFO     | [job] validate thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:09,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:11:37] 2025-10-12 18:11:09,602 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:09,663 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:09,746 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:09,851 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:10,268 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:10,727 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:13,575 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:14,562 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:11:37] 2025-10-12 18:11:18,898 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:11:37] 2025-10-12 18:11:19,904 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:11:37] 2025-10-12 18:11:21,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140353531569984)>', '<ExcThread(monitor, started 140353181034240)>']
[2025-10-12 20:11:37] 2025-10-12 18:11:26,162 | INFO     | all workflow threads have been joined
[2025-10-12 20:11:37] 2025-10-12 18:11:26,162 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:11:37] 2025-10-12 18:11:26,163 | INFO     | traces error code: 0
[2025-10-12 20:11:37] 2025-10-12 18:11:26,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:11:37] 2025-10-12 18:11:37,561 | INFO     | PID=2611210 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:11:37] 2025-10-12 18:11:37,562 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:11:37] 2025-10-12 18:11:37,562 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:11:37] 2025-10-12 18:11:37,562 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:11:37] 2025-10-12 18:11:37,562 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:11:37] 2025-10-12 18:11:37,562 | INFO     | [monitor] control thread has ended
[2025-10-12 20:11:37] 2025-10-12 18:11:37,610 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:11:37] 2025-10-12 18:11:37,612 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:11:37] 2025-10-12 18:11:37,614 [wrapper] pilotpid: 2611210
[2025-10-12 20:11:37] 2025-10-12 18:11:37,617 [wrapper] Pilot exit status: 0
[2025-10-12 20:11:37] 2025-10-12 18:11:37,624 [wrapper] pandaids: 6838852913
[2025-10-12 20:11:37] 2025-10-12 18:11:37,640 [wrapper] cleanup supervisor_pilot 2629813 2611211
[2025-10-12 20:11:37] 2025-10-12 18:11:37,643 [wrapper] Test setup, not cleaning
[2025-10-12 20:11:37] 2025-10-12 18:11:37,645 [wrapper] apfmon messages muted
[2025-10-12 20:11:37] 2025-10-12 18:11:37,648 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:11:37] 2025-10-12 18:11:37,650 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:11:37]  *** Error codes and diagnostics ***
[2025-10-12 20:11:37]     "exeErrorCode": 0,
[2025-10-12 20:11:37]     "exeErrorDiag": "",
[2025-10-12 20:11:37]     "pilotErrorCode": 0,
[2025-10-12 20:11:37]     "pilotErrorDiag": "",
[2025-10-12 20:11:37]  *** Listing of results directory ***
[2025-10-12 20:11:37] total 417616
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc    557409 Oct 11 22:36 pilot3.tar.gz
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc      5112 Oct 11 22:40 queuedata.json
[2025-10-12 20:11:37] -rwx------ 1 boinc boinc     36292 Oct 11 22:41 runpilot2-wrapper.sh
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc       100 Oct 12 18:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:11:37] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 18:46 run_atlas
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc       105 Oct 12 18:46 job.xml
[2025-10-12 20:11:37] -rw-r--r-- 2 boinc boinc 224217827 Oct 12 18:46 EVNT.46676267._002595.pool.root.1
[2025-10-12 20:11:37] -rw-r--r-- 2 boinc boinc    569684 Oct 12 18:46 input.tar.gz
[2025-10-12 20:11:37] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:46 start_atlas.sh
[2025-10-12 20:11:37] drwxrwx--x 2 boinc boinc      4096 Oct 12 18:46 shared
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:46 boinc_setup_complete
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc      6437 Oct 12 18:46 init_data.xml
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:46 boinc_lockfile
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc      2550 Oct 12 18:46 pandaJob.out
[2025-10-12 20:11:37] -rw------- 1 boinc boinc    975528 Oct 12 18:46 agis_schedconf.cvmfs.json
[2025-10-12 20:11:37] -rw------- 1 boinc boinc   1560580 Oct 12 18:46 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:11:37] drwx------ 5 boinc boinc      4096 Oct 12 18:46 pilot3
[2025-10-12 20:11:37] -rw------- 1 boinc boinc 197518257 Oct 12 20:10 HITS.46676269._064549.pool.root.1
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc       529 Oct 12 20:10 boinc_task_state.xml
[2025-10-12 20:11:37] -rw------- 1 boinc boinc      1021 Oct 12 20:10 memory_monitor_summary.json
[2025-10-12 20:11:37] -rw------- 1 boinc boinc    258510 Oct 12 20:10 log.46676269._064549.job.log.tgz.1
[2025-10-12 20:11:37] -rw------- 1 boinc boinc      7763 Oct 12 20:11 heartbeat.json
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc      8192 Oct 12 20:11 boinc_mmap_file
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc        27 Oct 12 20:11 wrapper_checkpoint.txt
[2025-10-12 20:11:37] -rw------- 1 boinc boinc       747 Oct 12 20:11 pilotlog.txt
[2025-10-12 20:11:37] -rw------- 1 boinc boinc        95 Oct 12 20:11 pilot_heartbeat.json
[2025-10-12 20:11:37] -rw------- 1 boinc boinc    746784 Oct 12 20:11 log.46676269._064549.job.log.1
[2025-10-12 20:11:37] -rw------- 1 boinc boinc       357 Oct 12 20:11 output.list
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc       620 Oct 12 20:11 runtime_log
[2025-10-12 20:11:37] -rw------- 1 boinc boinc   1024000 Oct 12 20:11 result.tar.gz
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc      8777 Oct 12 20:11 runtime_log.err
[2025-10-12 20:11:37] -rw------- 1 boinc boinc       658 Oct 12 20:11 4LSKDmsZvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyYhNDmUTBjFo.diag
[2025-10-12 20:11:37] -rw-r--r-- 1 boinc boinc      8977 Oct 12 20:11 stderr.txt
[2025-10-12 20:11:37] HITS file was successfully produced:
[2025-10-12 20:11:37] -rw------- 1 boinc boinc 197518257 Oct 12 20:10 shared/HITS.pool.root.1
[2025-10-12 20:11:37]  *** Contents of shared directory: ***
[2025-10-12 20:11:37] total 413440
[2025-10-12 20:11:37] -rw-r--r-- 2 boinc boinc 224217827 Oct 12 18:46 ATLAS.root_0
[2025-10-12 20:11:37] -rw-r--r-- 2 boinc boinc    569684 Oct 12 18:46 input.tar.gz
[2025-10-12 20:11:37] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:46 start_atlas.sh
[2025-10-12 20:11:37] -rw------- 1 boinc boinc 197518257 Oct 12 20:10 HITS.pool.root.1
[2025-10-12 20:11:37] -rw------- 1 boinc boinc   1024000 Oct 12 20:11 result.tar.gz
20:11:38 (2607493): run_atlas exited; CPU time 14549.968605
20:11:38 (2607493): called boinc_finish(0)

</stderr_txt>
]]>

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