Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
02:47:54 (3222552): wrapper (7.7.26015): starting
02:47:54 (3222552): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 02:47:54] Arguments: --nthreads 12
[2025-10-12 02:47:54] Threads: 12
[2025-10-12 02:47:54] Checking for CVMFS
[2025-10-12 02:47:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 02:47:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 02:47:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 02:47:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 02:47:54] 2.11.0.0 3299214 2481 83732 151604 0 188 5270132 6144001 14724 130560 0 48728151 100.000 87344 190 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 02:47:54] CVMFS is ok
[2025-10-12 02:47:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 02:47:54] Checking for apptainer binary...
[2025-10-12 02:47:54] apptainer is not installed, using version from CVMFS
[2025-10-12 02:47:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 02:47:55] radiat0r
[2025-10-12 02:47:55] apptainer works
[2025-10-12 02:47:55] Set ATHENA_PROC_NUMBER=12
[2025-10-12 02:47:55] Set ATHENA_CORE_NUMBER=12
[2025-10-12 02:47:55] Starting ATLAS job with PandaID=6838634480
[2025-10-12 02:47:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:39:21]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:39:21]  status=None
[2025-10-12 03:39:21]  status_code=0
[2025-10-12 03:39:21]  storage_token=
[2025-10-12 03:39:21]  surl=/var/lib/boinc/slots/4/PanDA_Pilot-6838634480/log.46676269._061830.job.log.tgz.1
[2025-10-12 03:39:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/33/log.46676269._061830.job.log.tgz.1
[2025-10-12 03:39:21]  workdir=None
[2025-10-12 03:39:21] ]
[2025-10-12 03:39:21] 2025-10-12 03:38:22,273 | INFO     | time since job start (3011s) is within the limit (172800.0s)
[2025-10-12 03:39:21] 2025-10-12 03:38:22,279 | INFO     | transferring file log.46676269._061830.job.log.tgz.1 from /var/lib/boinc/slots/4/PanDA_Pilot-6838634480/log.46676269._061830.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 03:39:21] 2025-10-12 03:38:22,279 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/4/PanDA_Pilot-6838634480/log.46676269._061830.job.log.tgz.1 /var/lib/boinc/slots/4/log.46676269._061830.job
[2025-10-12 03:39:21] 2025-10-12 03:38:22,311 | INFO     | adding to output.list: log.46676269._061830.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/33/log.46676269._061830.job.log.tg
[2025-10-12 03:39:21] 2025-10-12 03:38:22,312 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 03:39:21] 2025-10-12 03:38:22,312 | INFO     | summary of transferred files:
[2025-10-12 03:39:21] 2025-10-12 03:38:22,312 | INFO     |  -- lfn=log.46676269._061830.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 03:39:21] 2025-10-12 03:38:22,312 | INFO     | stage-out finished correctly
[2025-10-12 03:39:21] 2025-10-12 03:38:22,412 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 03:39:21] 2025-10-12 03:38:22,510 | INFO     | job 6838634480 has state=finished
[2025-10-12 03:39:21] 2025-10-12 03:38:22,510 | INFO     | preparing for final server update for job 6838634480 in state='finished'
[2025-10-12 03:39:21] 2025-10-12 03:38:22,511 | INFO     | this job has now completed (state=finished)
[2025-10-12 03:39:21] 2025-10-12 03:38:22,511 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 03:39:21] 2025-10-12 03:38:22,511 | INFO     | log transfer has been attempted: DONE
[2025-10-12 03:39:21] 2025-10-12 03:38:22,511 | INFO     | job 6838634480 has finished - writing final server update
[2025-10-12 03:39:21] 2025-10-12 03:38:22,512 | INFO     | total number of processed events: 400 (read)
[2025-10-12 03:39:21] 2025-10-12 03:38:22,513 | INFO     | executing command: lscpu
[2025-10-12 03:39:21] 2025-10-12 03:38:22,706 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 03:39:21] 2025-10-12 03:38:24,850 | INFO     | PID=3227268 has CPU usage=20.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 03:39:21] 2025-10-12 03:38:24,851 | INFO     | .. there are 17 such processes running
[2025-10-12 03:39:21] 2025-10-12 03:38:25,253 | WARNING  | process 3235421 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 03:39:21] 2025-10-12 03:38:25,253 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6838634480/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:39:21] 2025-10-12 03:38:25,852 | INFO     | time since job start (3014s) is within the limit (172800.0s)
[2025-10-12 03:39:21] 2025-10-12 03:38:26,125 | INFO     | number of running child processes to parent process 3235421: 1
[2025-10-12 03:39:21] 2025-10-12 03:38:26,126 | INFO     | maximum number of monitored processes: 6
[2025-10-12 03:39:21] 2025-10-12 03:38:27,858 | INFO     | time since job start (3016s) is within the limit (172800.0s)
[2025-10-12 03:39:21] 2025-10-12 03:38:28,629 | INFO     | monitor loop #210: job 0:6838634480 is in state 'finished'
[2025-10-12 03:39:21] 2025-10-12 03:38:28,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 03:39:21] 2025-10-12 03:38:29,501 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 03:39:21] 2025-10-12 03:38:29,566 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2341.5091757812515
[2025-10-12 03:39:21] 2025-10-12 03:38:29,638 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6838634480/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:39:21] 2025-10-12 03:38:29,639 | INFO     | extracted standard info from prmon json
[2025-10-12 03:39:21] 2025-10-12 03:38:29,639 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 03:39:21] 2025-10-12 03:38:29,639 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:39:21] 2025-10-12 03:38:29,640 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:39:21] 2025-10-12 03:38:29,640 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:39:21] 2025-10-12 03:38:29,641 | INFO     | fitting pss+swap vs Time
[2025-10-12 03:39:21] 2025-10-12 03:38:29,641 | INFO     | sum of square deviations: 22960430.5
[2025-10-12 03:39:21] 2025-10-12 03:38:29,642 | INFO     | sum of deviations: 170784139.99999997
[2025-10-12 03:39:21] 2025-10-12 03:38:29,642 | INFO     | mean x: 1760238880.5
[2025-10-12 03:39:21] 2025-10-12 03:38:29,642 | INFO     | mean y: 2661665.285714286
[2025-10-12 03:39:21] 2025-10-12 03:38:29,642 | INFO     | -- intersect: -13090336891.546886
[2025-10-12 03:39:21] 2025-10-12 03:38:29,642 | INFO     | intersect: -13090336891.546886
[2025-10-12 03:39:21] 2025-10-12 03:38:29,642 | INFO     | chi2: 0.0015509063422415083
[2025-10-12 03:39:21] 2025-10-12 03:38:29,642 | INFO     | -- intersect: -13090336891.546886
[2025-10-12 03:39:21] 2025-10-12 03:38:29,642 | INFO     | current memory leak: 7.44 B/s (using 42 data points, chi2=0.00)
[2025-10-12 03:39:21] 2025-10-12 03:38:29,643 | INFO     | could have reported an average CPU frequency of 2367 MHz (5 samples)
[2025-10-12 03:39:21] 2025-10-12 03:38:29,643 | INFO     | ..............................
[2025-10-12 03:39:21] 2025-10-12 03:38:29,643 | INFO     | . Timing measurements:
[2025-10-12 03:39:21] 2025-10-12 03:38:29,643 | INFO     | . get job = 0 s
[2025-10-12 03:39:21] 2025-10-12 03:38:29,643 | INFO     | . initial setup = 3 s
[2025-10-12 03:39:21] 2025-10-12 03:38:29,643 | INFO     | . payload setup = 8 s
[2025-10-12 03:39:21] 2025-10-12 03:38:29,643 | INFO     | . stage-in = 0 s
[2025-10-12 03:39:21] 2025-10-12 03:38:29,643 | INFO     | . payload execution = 2979 s
[2025-10-12 03:39:21] 2025-10-12 03:38:29,643 | INFO     | . stage-out = 0 s
[2025-10-12 03:39:21] 2025-10-12 03:38:29,644 | INFO     | . log creation = 0 s
[2025-10-12 03:39:21] 2025-10-12 03:38:29,644 | INFO     | ..............................
[2025-10-12 03:39:21] 2025-10-12 03:38:29,743 | INFO     | 
[2025-10-12 03:39:21] 2025-10-12 03:38:29,744 | INFO     | job summary report
[2025-10-12 03:39:21] 2025-10-12 03:38:29,744 | INFO     | --------------------------------------------------
[2025-10-12 03:39:21] 2025-10-12 03:38:29,744 | INFO     | PanDA job id: 6838634480
[2025-10-12 03:39:21] 2025-10-12 03:38:29,744 | INFO     | task id: 46676269
[2025-10-12 03:39:21] 2025-10-12 03:38:29,744 | INFO     | errors: (none)
[2025-10-12 03:39:21] 2025-10-12 03:38:29,744 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:39:21] 2025-10-12 03:38:29,744 | INFO     | pilot state: finished 
[2025-10-12 03:39:21] 2025-10-12 03:38:29,744 | INFO     | transexitcode: 0
[2025-10-12 03:39:21] 2025-10-12 03:38:29,744 | INFO     | exeerrorcode: 0
[2025-10-12 03:39:21] 2025-10-12 03:38:29,744 | INFO     | exeerrordiag: 
[2025-10-12 03:39:21] 2025-10-12 03:38:29,745 | INFO     | exitcode: 0
[2025-10-12 03:39:21] 2025-10-12 03:38:29,745 | INFO     | exitmsg: OK
[2025-10-12 03:39:21] 2025-10-12 03:38:29,745 | INFO     | cpuconsumptiontime: 31286 s
[2025-10-12 03:39:21] 2025-10-12 03:38:29,745 | INFO     | nevents: 400
[2025-10-12 03:39:21] 2025-10-12 03:38:29,745 | INFO     | neventsw: 0
[2025-10-12 03:39:21] 2025-10-12 03:38:29,745 | INFO     | pid: 3235421
[2025-10-12 03:39:21] 2025-10-12 03:38:29,745 | INFO     | pgrp: 3235421
[2025-10-12 03:39:21] 2025-10-12 03:38:29,745 | INFO     | corecount: 12
[2025-10-12 03:39:21] 2025-10-12 03:38:29,745 | INFO     | event service: False
[2025-10-12 03:39:21] 2025-10-12 03:38:29,745 | INFO     | sizes: {0: 2348686, 1: 2348885, 8: 2349147, 11: 2349175, 2992: 2374737, 2993: 2383919, 3000: 2384089}
[2025-10-12 03:39:21] 2025-10-12 03:38:29,745 | INFO     | --------------------------------------------------
[2025-10-12 03:39:21] 2025-10-12 03:38:29,745 | INFO     | 
[2025-10-12 03:39:21] 2025-10-12 03:38:29,746 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-12 03:39:21] 2025-10-12 03:38:29,775 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,775 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,775 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,775 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,775 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,776 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,776 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,776 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,776 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,776 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,776 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,776 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,776 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,776 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,776 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,777 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,777 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:39:21] 2025-10-12 03:38:29,777 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,777 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:39:21] 2025-10-12 03:38:29,777 | INFO     | job 6838634480 has completed (purged errors)
[2025-10-12 03:39:21] 2025-10-12 03:38:29,777 | INFO     | overall cleanup function is called
[2025-10-12 03:39:21] 2025-10-12 03:38:30,783 | INFO     | --- collectZombieJob: --- 10, [3235421]
[2025-10-12 03:39:21] 2025-10-12 03:38:30,783 | INFO     | zombie collector waiting for pid 3235421
[2025-10-12 03:39:21] 2025-10-12 03:38:30,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:39:21] 2025-10-12 03:38:30,783 | INFO     | collected zombie processes
[2025-10-12 03:39:21] 2025-10-12 03:38:30,783 | INFO     | will attempt to kill all subprocesses of pid=3235421
[2025-10-12 03:39:21] 2025-10-12 03:38:31,527 | INFO     | process IDs to be killed: [3235421] (in reverse order)
[2025-10-12 03:39:21] 2025-10-12 03:38:31,803 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:39:21] 2025-10-12 03:38:31,803 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:39:21] 2025-10-12 03:38:31,831 | INFO     | did not find any defunct processes belonging to 3235421
[2025-10-12 03:39:21] 2025-10-12 03:38:31,858 | INFO     | did not find any defunct processes belonging to 3235421
[2025-10-12 03:39:21] 2025-10-12 03:38:31,858 | INFO     | ready for new job
[2025-10-12 03:39:21] 2025-10-12 03:38:31,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:39:21] 2025-10-12 03:38:31,860 | INFO     | ***************************************
[2025-10-12 03:39:21] 2025-10-12 03:38:31,861 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:39:21] 2025-10-12 03:38:31,861 | INFO     | ***************************************
[2025-10-12 03:39:21] 2025-10-12 03:38:31,861 | INFO     | 
[2025-10-12 03:39:21] 2025-10-12 03:38:31,900 | INFO     | architecture information:
[2025-10-12 03:39:21] 2025-10-12 03:38:31,901 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:39:21] 2025-10-12 03:38:31,925 | INFO     | cat /etc/os-release:
[2025-10-12 03:39:21] NAME="CentOS Linux"
[2025-10-12 03:39:21] VERSION="7 (Core)"
[2025-10-12 03:39:21] ID="centos"
[2025-10-12 03:39:21] ID_LIKE="rhel fedora"
[2025-10-12 03:39:21] VERSION_ID="7"
[2025-10-12 03:39:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:39:21] ANSI_COLOR="0;31"
[2025-10-12 03:39:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:39:21] HOME_URL="https://www.centos.org/"
[2025-10-12 03:39:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:39:21] 
[2025-10-12 03:39:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:39:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:39:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:39:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:39:21] 
[2025-10-12 03:39:21] 2025-10-12 03:38:31,926 | INFO     | ***************************************
[2025-10-12 03:39:21] 2025-10-12 03:38:32,429 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-12 03:39:21] 2025-10-12 03:38:32,460 | INFO     | sufficient remaining disk space (1725611114496 B)
[2025-10-12 03:39:21] 2025-10-12 03:38:32,460 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:39:21] 2025-10-12 03:38:32,461 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:39:21] 2025-10-12 03:38:32,461 | INFO     | update_server=False
[2025-10-12 03:39:21] 2025-10-12 03:38:32,461 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:39:21] 2025-10-12 03:38:32,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:39:21] 2025-10-12 03:38:32,462 | INFO     | aborting loop
[2025-10-12 03:39:21] 2025-10-12 03:38:32,922 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:39:21] 2025-10-12 03:38:33,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:39:21] 2025-10-12 03:38:33,246 | INFO     | all data control threads have been joined
[2025-10-12 03:39:21] 2025-10-12 03:38:33,414 | INFO     | all job control threads have been joined
[2025-10-12 03:39:21] 2025-10-12 03:38:33,464 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:33,466 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:33,517 | INFO     | all payload control threads have been joined
[2025-10-12 03:39:21] 2025-10-12 03:38:33,606 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:33,854 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:34,250 | INFO     | [data] control thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:34,305 | INFO     | [job] validate thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:34,316 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:34,406 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:34,420 | INFO     | [job] control thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:34,522 | INFO     | [payload] control thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:34,663 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:34,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:39:21] 2025-10-12 03:38:34,803 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:34,926 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:35,758 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:37,018 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:38:42,958 | INFO     | job.realtimelogging is not enabled
[2025-10-12 03:39:21] 2025-10-12 03:38:43,964 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:39:21] 2025-10-12 03:39:01,939 | INFO     | PID=3227268 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 03:39:21] 2025-10-12 03:39:01,939 | INFO     | .. there are 17 such processes running
[2025-10-12 03:39:21] 2025-10-12 03:39:01,940 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:39:21] 2025-10-12 03:39:01,941 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:39:21] 2025-10-12 03:39:01,941 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:39:21] 2025-10-12 03:39:15,714 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:39:21] 2025-10-12 03:39:15,946 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140369584674624)>', '<ExcThread(monitor, started 140368859363072)>']
[2025-10-12 03:39:21] 2025-10-12 03:39:16,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:39:21] 2025-10-12 03:39:16,003 | INFO     | [monitor] control thread has ended
[2025-10-12 03:39:21] 2025-10-12 03:39:20,970 | INFO     | all workflow threads have been joined
[2025-10-12 03:39:21] 2025-10-12 03:39:20,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:39:21] 2025-10-12 03:39:20,973 | INFO     | traces error code: 0
[2025-10-12 03:39:21] 2025-10-12 03:39:20,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:39:21] 2025-10-12 03:39:21,128 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:39:21] 2025-10-12 03:39:21,132 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:39:21] 2025-10-12 03:39:21,136 [wrapper] pilotpid: 3227268
[2025-10-12 03:39:21] 2025-10-12 03:39:21,139 [wrapper] Pilot exit status: 0
[2025-10-12 03:39:21] 2025-10-12 03:39:21,153 [wrapper] pandaids: 6838634480
[2025-10-12 03:39:21] 2025-10-12 03:39:21,331 [wrapper] cleanup supervisor_pilot 3612093 3227269
[2025-10-12 03:39:21] 2025-10-12 03:39:21,336 [wrapper] Test setup, not cleaning
[2025-10-12 03:39:21] 2025-10-12 03:39:21,340 [wrapper] apfmon messages muted
[2025-10-12 03:39:21] 2025-10-12 03:39:21,344 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:39:21] 2025-10-12 03:39:21,348 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:39:21]  *** Error codes and diagnostics ***
[2025-10-12 03:39:21]     "exeErrorCode": 0,
[2025-10-12 03:39:21]     "exeErrorDiag": "",
[2025-10-12 03:39:21]     "pilotErrorCode": 0,
[2025-10-12 03:39:21]     "pilotErrorDiag": "",
[2025-10-12 03:39:21]  *** Listing of results directory ***
[2025-10-12 03:39:21] total 403196
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc    557409 Oct 11 17:18 pilot3.tar.gz
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc      5112 Oct 11 17:25 queuedata.json
[2025-10-12 03:39:21] -rwx------ 1 boinc boinc     36292 Oct 11 17:25 runpilot2-wrapper.sh
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc       100 Oct 12 02:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:39:21] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 02:47 run_atlas
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc       105 Oct 12 02:47 job.xml
[2025-10-12 03:39:21] -rw-r--r-- 2 boinc boinc     15120 Oct 12 02:47 start_atlas.sh
[2025-10-12 03:39:21] drwxrwx--x 2 boinc boinc      4096 Oct 12 02:47 shared
[2025-10-12 03:39:21] -rw-r--r-- 2 boinc boinc    569679 Oct 12 02:47 input.tar.gz
[2025-10-12 03:39:21] -rw-r--r-- 2 boinc boinc 219788926 Oct 12 02:47 EVNT.46676267._002484.pool.root.1
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc         0 Oct 12 02:47 boinc_setup_complete
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc      9395 Oct 12 02:47 init_data.xml
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc         0 Oct 12 02:47 boinc_lockfile
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc      2550 Oct 12 02:47 pandaJob.out
[2025-10-12 03:39:21] -rw------- 1 boinc boinc    975496 Oct 12 02:48 agis_schedconf.cvmfs.json
[2025-10-12 03:39:21] -rw------- 1 boinc boinc   1560580 Oct 12 02:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:39:21] drwx------ 5 boinc boinc      4096 Oct 12 02:48 pilot3
[2025-10-12 03:39:21] -rw------- 1 boinc boinc 187552555 Oct 12 03:37 HITS.46676269._061830.pool.root.1
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc       529 Oct 12 03:37 boinc_task_state.xml
[2025-10-12 03:39:21] -rw------- 1 boinc boinc      1027 Oct 12 03:38 memory_monitor_summary.json
[2025-10-12 03:39:21] -rw------- 1 boinc boinc    356672 Oct 12 03:38 log.46676269._061830.job.log.tgz.1
[2025-10-12 03:39:21] -rw------- 1 boinc boinc      7742 Oct 12 03:38 heartbeat.json
[2025-10-12 03:39:21] -rw------- 1 boinc boinc        95 Oct 12 03:39 pilot_heartbeat.json
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc      8192 Oct 12 03:39 boinc_mmap_file
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc        27 Oct 12 03:39 wrapper_checkpoint.txt
[2025-10-12 03:39:21] -rw------- 1 boinc boinc      4899 Oct 12 03:39 pilotlog.txt
[2025-10-12 03:39:21] -rw------- 1 boinc boinc    449800 Oct 12 03:39 log.46676269._061830.job.log.1
[2025-10-12 03:39:21] -rw------- 1 boinc boinc       357 Oct 12 03:39 output.list
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc       620 Oct 12 03:39 runtime_log
[2025-10-12 03:39:21] -rw------- 1 boinc boinc    829440 Oct 12 03:39 result.tar.gz
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc      8658 Oct 12 03:39 runtime_log.err
[2025-10-12 03:39:21] -rw------- 1 boinc boinc       643 Oct 12 03:39 0KFLDm7WsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm24gNDm0fZpym.diag
[2025-10-12 03:39:21] -rw-r--r-- 1 boinc boinc     21785 Oct 12 03:39 stderr.txt
[2025-10-12 03:39:21] HITS file was successfully produced:
[2025-10-12 03:39:21] -rw------- 1 boinc boinc 187552555 Oct 12 03:37 shared/HITS.pool.root.1
[2025-10-12 03:39:21]  *** Contents of shared directory: ***
[2025-10-12 03:39:21] total 399196
[2025-10-12 03:39:21] -rw-r--r-- 2 boinc boinc     15120 Oct 12 02:47 start_atlas.sh
[2025-10-12 03:39:21] -rw-r--r-- 2 boinc boinc    569679 Oct 12 02:47 input.tar.gz
[2025-10-12 03:39:21] -rw-r--r-- 2 boinc boinc 219788926 Oct 12 02:47 ATLAS.root_0
[2025-10-12 03:39:21] -rw------- 1 boinc boinc 187552555 Oct 12 03:37 HITS.pool.root.1
[2025-10-12 03:39:21] -rw------- 1 boinc boinc    829440 Oct 12 03:39 result.tar.gz
03:39:23 (3222552): run_atlas exited; CPU time 31469.459852
03:39:23 (3222552): called boinc_finish(0)

</stderr_txt>
]]>

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