Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
03:07:10 (3401431): wrapper (7.7.26015): starting
03:07:10 (3401431): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 03:07:10] Arguments: --nthreads 12
[2025-10-12 03:07:10] Threads: 12
[2025-10-12 03:07:10] Checking for CVMFS
[2025-10-12 03:07:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 03:07:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 03:07:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 03:07:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 03:07:11] 2.11.0.0 3299214 2501 84252 151604 1 188 5272386 6144001 14476 130560 0 49142082 100.000 87347 190 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 03:07:11] CVMFS is ok
[2025-10-12 03:07:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 03:07:11] Checking for apptainer binary...
[2025-10-12 03:07:11] apptainer is not installed, using version from CVMFS
[2025-10-12 03:07:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 03:07:11] radiat0r
[2025-10-12 03:07:11] apptainer works
[2025-10-12 03:07:11] Set ATHENA_PROC_NUMBER=12
[2025-10-12 03:07:11] Set ATHENA_CORE_NUMBER=12
[2025-10-12 03:07:11] Starting ATLAS job with PandaID=6838634420
[2025-10-12 03:07:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 03:58:56]  *** The last 200 lines of the pilot log: ***
[2025-10-12 03:58:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 03:58:56]  replicas=None
[2025-10-12 03:58:56]  scope=mc23_13p6TeV
[2025-10-12 03:58:56]  status=None
[2025-10-12 03:58:56]  status_code=0
[2025-10-12 03:58:56]  storage_token=
[2025-10-12 03:58:56]  surl=/var/lib/boinc/slots/12/PanDA_Pilot-6838634420/log.46676269._061770.job.log.tgz.1
[2025-10-12 03:58:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/f4/log.46676269._061770.job.log.tgz.1
[2025-10-12 03:58:56]  workdir=None
[2025-10-12 03:58:56] ]
[2025-10-12 03:58:56] 2025-10-12 03:58:13,751 | INFO     | transferring file log.46676269._061770.job.log.tgz.1 from /var/lib/boinc/slots/12/PanDA_Pilot-6838634420/log.46676269._061770.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 03:58:56] 2025-10-12 03:58:13,751 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/12/PanDA_Pilot-6838634420/log.46676269._061770.job.log.tgz.1 /var/lib/boinc/slots/12/log.46676269._061770.j
[2025-10-12 03:58:56] 2025-10-12 03:58:13,777 | INFO     | adding to output.list: log.46676269._061770.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/f4/log.46676269._061770.job.log.tg
[2025-10-12 03:58:56] 2025-10-12 03:58:13,778 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 03:58:56] 2025-10-12 03:58:13,779 | INFO     | summary of transferred files:
[2025-10-12 03:58:56] 2025-10-12 03:58:13,779 | INFO     |  -- lfn=log.46676269._061770.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 03:58:56] 2025-10-12 03:58:13,779 | INFO     | stage-out finished correctly
[2025-10-12 03:58:56] 2025-10-12 03:58:14,639 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 03:58:56] 2025-10-12 03:58:15,098 | INFO     | job 6838634420 has state=finished
[2025-10-12 03:58:56] 2025-10-12 03:58:15,099 | INFO     | preparing for final server update for job 6838634420 in state='finished'
[2025-10-12 03:58:56] 2025-10-12 03:58:15,099 | INFO     | this job has now completed (state=finished)
[2025-10-12 03:58:56] 2025-10-12 03:58:15,099 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 03:58:56] 2025-10-12 03:58:15,099 | INFO     | log transfer has been attempted: DONE
[2025-10-12 03:58:56] 2025-10-12 03:58:15,100 | INFO     | job 6838634420 has finished - writing final server update
[2025-10-12 03:58:56] 2025-10-12 03:58:15,100 | INFO     | total number of processed events: 400 (read)
[2025-10-12 03:58:56] 2025-10-12 03:58:15,102 | INFO     | executing command: lscpu
[2025-10-12 03:58:56] 2025-10-12 03:58:15,291 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 03:58:56] 2025-10-12 03:58:15,637 | INFO     | time since job start (3047s) is within the limit (172800.0s)
[2025-10-12 03:58:56] 2025-10-12 03:58:17,643 | INFO     | time since job start (3049s) is within the limit (172800.0s)
[2025-10-12 03:58:56] 2025-10-12 03:58:19,648 | INFO     | time since job start (3051s) is within the limit (172800.0s)
[2025-10-12 03:58:56] 2025-10-12 03:58:19,907 | WARNING  | process 3414312 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 03:58:56] 2025-10-12 03:58:19,908 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6838634420/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:58:56] 2025-10-12 03:58:20,767 | INFO     | number of running child processes to parent process 3414312: 1
[2025-10-12 03:58:56] 2025-10-12 03:58:20,768 | INFO     | maximum number of monitored processes: 6
[2025-10-12 03:58:56] 2025-10-12 03:58:21,656 | INFO     | time since job start (3053s) is within the limit (172800.0s)
[2025-10-12 03:58:56] 2025-10-12 03:58:21,879 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 03:58:56] 2025-10-12 03:58:21,941 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2334.768941406252
[2025-10-12 03:58:56] 2025-10-12 03:58:22,012 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6838634420/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 03:58:56] 2025-10-12 03:58:22,012 | INFO     | extracted standard info from prmon json
[2025-10-12 03:58:56] 2025-10-12 03:58:22,013 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 03:58:56] 2025-10-12 03:58:22,013 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 03:58:56] 2025-10-12 03:58:22,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 03:58:56] 2025-10-12 03:58:22,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 03:58:56] 2025-10-12 03:58:22,015 | INFO     | fitting pss+swap vs Time
[2025-10-12 03:58:56] 2025-10-12 03:58:22,015 | INFO     | sum of square deviations: 24640462.0
[2025-10-12 03:58:56] 2025-10-12 03:58:22,015 | INFO     | sum of deviations: 350177332.00000006
[2025-10-12 03:58:56] 2025-10-12 03:58:22,015 | INFO     | mean x: 1760240069.0
[2025-10-12 03:58:56] 2025-10-12 03:58:22,015 | INFO     | mean y: 2650137.488372093
[2025-10-12 03:58:56] 2025-10-12 03:58:22,015 | INFO     | -- intersect: -25012959190.04437
[2025-10-12 03:58:56] 2025-10-12 03:58:22,015 | INFO     | intersect: -25012959190.04437
[2025-10-12 03:58:56] 2025-10-12 03:58:22,016 | INFO     | chi2: 0.0005726181021020838
[2025-10-12 03:58:56] 2025-10-12 03:58:22,016 | INFO     | -- intersect: -25012959190.04437
[2025-10-12 03:58:56] 2025-10-12 03:58:22,016 | INFO     | current memory leak: 14.21 B/s (using 43 data points, chi2=0.00)
[2025-10-12 03:58:56] 2025-10-12 03:58:22,016 | INFO     | could have reported an average CPU frequency of 2361 MHz (5 samples)
[2025-10-12 03:58:56] 2025-10-12 03:58:22,016 | INFO     | ..............................
[2025-10-12 03:58:56] 2025-10-12 03:58:22,016 | INFO     | . Timing measurements:
[2025-10-12 03:58:56] 2025-10-12 03:58:22,016 | INFO     | . get job = 0 s
[2025-10-12 03:58:56] 2025-10-12 03:58:22,017 | INFO     | . initial setup = 3 s
[2025-10-12 03:58:56] 2025-10-12 03:58:22,017 | INFO     | . payload setup = 8 s
[2025-10-12 03:58:56] 2025-10-12 03:58:22,017 | INFO     | . stage-in = 0 s
[2025-10-12 03:58:56] 2025-10-12 03:58:22,017 | INFO     | . payload execution = 3013 s
[2025-10-12 03:58:56] 2025-10-12 03:58:22,017 | INFO     | . stage-out = 0 s
[2025-10-12 03:58:56] 2025-10-12 03:58:22,017 | INFO     | . log creation = 0 s
[2025-10-12 03:58:56] 2025-10-12 03:58:22,017 | INFO     | ..............................
[2025-10-12 03:58:56] 2025-10-12 03:58:22,116 | INFO     | 
[2025-10-12 03:58:56] 2025-10-12 03:58:22,117 | INFO     | job summary report
[2025-10-12 03:58:56] 2025-10-12 03:58:22,117 | INFO     | --------------------------------------------------
[2025-10-12 03:58:56] 2025-10-12 03:58:22,117 | INFO     | PanDA job id: 6838634420
[2025-10-12 03:58:56] 2025-10-12 03:58:22,117 | INFO     | task id: 46676269
[2025-10-12 03:58:56] 2025-10-12 03:58:22,117 | INFO     | errors: (none)
[2025-10-12 03:58:56] 2025-10-12 03:58:22,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 03:58:56] 2025-10-12 03:58:22,117 | INFO     | pilot state: finished 
[2025-10-12 03:58:56] 2025-10-12 03:58:22,117 | INFO     | transexitcode: 0
[2025-10-12 03:58:56] 2025-10-12 03:58:22,117 | INFO     | exeerrorcode: 0
[2025-10-12 03:58:56] 2025-10-12 03:58:22,117 | INFO     | exeerrordiag: 
[2025-10-12 03:58:56] 2025-10-12 03:58:22,118 | INFO     | exitcode: 0
[2025-10-12 03:58:56] 2025-10-12 03:58:22,118 | INFO     | exitmsg: OK
[2025-10-12 03:58:56] 2025-10-12 03:58:22,118 | INFO     | cpuconsumptiontime: 31333 s
[2025-10-12 03:58:56] 2025-10-12 03:58:22,118 | INFO     | nevents: 400
[2025-10-12 03:58:56] 2025-10-12 03:58:22,118 | INFO     | neventsw: 0
[2025-10-12 03:58:56] 2025-10-12 03:58:22,118 | INFO     | pid: 3414312
[2025-10-12 03:58:56] 2025-10-12 03:58:22,118 | INFO     | pgrp: 3414312
[2025-10-12 03:58:56] 2025-10-12 03:58:22,118 | INFO     | corecount: 12
[2025-10-12 03:58:56] 2025-10-12 03:58:22,118 | INFO     | event service: False
[2025-10-12 03:58:56] 2025-10-12 03:58:22,118 | INFO     | sizes: {0: 2348687, 1: 2348886, 8: 2349148, 11: 2349176, 3026: 2374595, 3027: 2383595, 3028: 2383779, 3035: 2384005}
[2025-10-12 03:58:56] 2025-10-12 03:58:22,118 | INFO     | --------------------------------------------------
[2025-10-12 03:58:56] 2025-10-12 03:58:22,119 | INFO     | 
[2025-10-12 03:58:56] 2025-10-12 03:58:22,119 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-10-12 03:58:56] 2025-10-12 03:58:22,148 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,149 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,149 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,149 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,149 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,149 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,149 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,149 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,150 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,150 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,150 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,150 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,150 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 03:58:56] 2025-10-12 03:58:22,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,151 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 03:58:56] 2025-10-12 03:58:22,151 | INFO     | job 6838634420 has completed (purged errors)
[2025-10-12 03:58:56] 2025-10-12 03:58:22,151 | INFO     | overall cleanup function is called
[2025-10-12 03:58:56] 2025-10-12 03:58:23,161 | INFO     | --- collectZombieJob: --- 10, [3414312]
[2025-10-12 03:58:56] 2025-10-12 03:58:23,162 | INFO     | zombie collector waiting for pid 3414312
[2025-10-12 03:58:56] 2025-10-12 03:58:23,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 03:58:56] 2025-10-12 03:58:23,162 | INFO     | collected zombie processes
[2025-10-12 03:58:56] 2025-10-12 03:58:23,162 | INFO     | will attempt to kill all subprocesses of pid=3414312
[2025-10-12 03:58:56] 2025-10-12 03:58:23,953 | INFO     | process IDs to be killed: [3414312] (in reverse order)
[2025-10-12 03:58:56] 2025-10-12 03:58:24,198 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 03:58:56] 2025-10-12 03:58:24,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 03:58:56] 2025-10-12 03:58:24,226 | INFO     | did not find any defunct processes belonging to 3414312
[2025-10-12 03:58:56] 2025-10-12 03:58:24,253 | INFO     | did not find any defunct processes belonging to 3414312
[2025-10-12 03:58:56] 2025-10-12 03:58:24,254 | INFO     | ready for new job
[2025-10-12 03:58:56] 2025-10-12 03:58:24,254 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 03:58:56] 2025-10-12 03:58:24,257 | INFO     | ***************************************
[2025-10-12 03:58:56] 2025-10-12 03:58:24,258 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 03:58:56] 2025-10-12 03:58:24,258 | INFO     | ***************************************
[2025-10-12 03:58:56] 2025-10-12 03:58:24,258 | INFO     | 
[2025-10-12 03:58:56] 2025-10-12 03:58:24,297 | INFO     | architecture information:
[2025-10-12 03:58:56] 2025-10-12 03:58:24,297 | INFO     | executing command: cat /etc/os-release
[2025-10-12 03:58:56] 2025-10-12 03:58:24,323 | INFO     | cat /etc/os-release:
[2025-10-12 03:58:56] NAME="CentOS Linux"
[2025-10-12 03:58:56] VERSION="7 (Core)"
[2025-10-12 03:58:56] ID="centos"
[2025-10-12 03:58:56] ID_LIKE="rhel fedora"
[2025-10-12 03:58:56] VERSION_ID="7"
[2025-10-12 03:58:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 03:58:56] ANSI_COLOR="0;31"
[2025-10-12 03:58:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 03:58:56] HOME_URL="https://www.centos.org/"
[2025-10-12 03:58:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 03:58:56] 
[2025-10-12 03:58:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 03:58:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 03:58:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 03:58:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 03:58:56] 
[2025-10-12 03:58:56] 2025-10-12 03:58:24,324 | INFO     | ***************************************
[2025-10-12 03:58:56] 2025-10-12 03:58:24,827 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-10-12 03:58:56] 2025-10-12 03:58:24,853 | INFO     | sufficient remaining disk space (1725561831424 B)
[2025-10-12 03:58:56] 2025-10-12 03:58:24,854 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 03:58:56] 2025-10-12 03:58:24,854 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 03:58:56] 2025-10-12 03:58:24,854 | INFO     | update_server=False
[2025-10-12 03:58:56] 2025-10-12 03:58:24,854 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 03:58:56] 2025-10-12 03:58:24,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:58:56] 2025-10-12 03:58:24,855 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 03:58:56] 2025-10-12 03:58:24,855 | INFO     | aborting loop
[2025-10-12 03:58:56] 2025-10-12 03:58:25,181 | INFO     | all payload control threads have been joined
[2025-10-12 03:58:56] 2025-10-12 03:58:25,245 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 03:58:56] 2025-10-12 03:58:25,383 | INFO     | all data control threads have been joined
[2025-10-12 03:58:56] 2025-10-12 03:58:25,858 | INFO     | [job] retrieve thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:25,859 | INFO     | [job] job monitor thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:26,014 | INFO     | [payload] failed_post thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:26,186 | INFO     | all job control threads have been joined
[2025-10-12 03:58:56] 2025-10-12 03:58:26,187 | INFO     | [payload] control thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:26,251 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:26,312 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:26,346 | INFO     | [data] copytool_in thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:26,386 | INFO     | [data] control thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:26,714 | INFO     | [payload] validate_post thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:26,860 | INFO     | [data] copytool_out thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:27,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 03:58:56] 2025-10-12 03:58:27,190 | INFO     | [job] control thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:27,266 | INFO     | [job] validate thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:27,326 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:28,126 | INFO     | [job] queue monitor thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:29,250 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:32,578 | INFO     | [monitor] cgroup control has ended
[2025-10-12 03:58:56] 2025-10-12 03:58:35,504 | INFO     | job.realtimelogging is not enabled
[2025-10-12 03:58:56] 2025-10-12 03:58:36,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 03:58:56] 2025-10-12 03:58:37,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518078576448)>', '<ExcThread(monitor, started 140517851272960)>']
[2025-10-12 03:58:56] 2025-10-12 03:58:42,206 | INFO     | all workflow threads have been joined
[2025-10-12 03:58:56] 2025-10-12 03:58:42,207 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 03:58:56] 2025-10-12 03:58:42,207 | INFO     | traces error code: 0
[2025-10-12 03:58:56] 2025-10-12 03:58:42,207 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 03:58:56] 2025-10-12 03:58:55,706 | INFO     | PID=3406143 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 03:58:56] 2025-10-12 03:58:55,706 | INFO     | .. there are 17 such processes running
[2025-10-12 03:58:56] 2025-10-12 03:58:55,707 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 03:58:56] 2025-10-12 03:58:55,707 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 03:58:56] 2025-10-12 03:58:55,707 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 03:58:56] 2025-10-12 03:58:55,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 03:58:56] 2025-10-12 03:58:55,707 | INFO     | [monitor] control thread has ended
[2025-10-12 03:58:56] 2025-10-12 03:58:55,854 [wrapper] ==== pilot stdout END ====
[2025-10-12 03:58:56] 2025-10-12 03:58:55,860 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 03:58:56] 2025-10-12 03:58:55,863 [wrapper] pilotpid: 3406143
[2025-10-12 03:58:56] 2025-10-12 03:58:55,868 [wrapper] Pilot exit status: 0
[2025-10-12 03:58:56] 2025-10-12 03:58:55,880 [wrapper] pandaids: 6838634420
[2025-10-12 03:58:56] 2025-10-12 03:58:56,054 [wrapper] cleanup supervisor_pilot 3770028 3406144
[2025-10-12 03:58:56] 2025-10-12 03:58:56,059 [wrapper] Test setup, not cleaning
[2025-10-12 03:58:56] 2025-10-12 03:58:56,062 [wrapper] apfmon messages muted
[2025-10-12 03:58:56] 2025-10-12 03:58:56,065 [wrapper] ==== wrapper stdout END ====
[2025-10-12 03:58:56] 2025-10-12 03:58:56,068 [wrapper] ==== wrapper stderr END ====
[2025-10-12 03:58:56]  *** Error codes and diagnostics ***
[2025-10-12 03:58:56]     "exeErrorCode": 0,
[2025-10-12 03:58:56]     "exeErrorDiag": "",
[2025-10-12 03:58:56]     "pilotErrorCode": 0,
[2025-10-12 03:58:56]     "pilotErrorDiag": "",
[2025-10-12 03:58:56]  *** Listing of results directory ***
[2025-10-12 03:58:56] total 405160
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc      5112 Oct 11 17:18 queuedata.json
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc    557409 Oct 11 17:18 pilot3.tar.gz
[2025-10-12 03:58:56] -rwx------ 1 boinc boinc     36292 Oct 11 17:20 runpilot2-wrapper.sh
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc       100 Oct 12 03:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 03:58:56] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 03:07 run_atlas
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc       105 Oct 12 03:07 job.xml
[2025-10-12 03:58:56] -rw-r--r-- 2 boinc boinc     15120 Oct 12 03:07 start_atlas.sh
[2025-10-12 03:58:56] drwxrwx--x 2 boinc boinc      4096 Oct 12 03:07 shared
[2025-10-12 03:58:56] -rw-r--r-- 2 boinc boinc    569680 Oct 12 03:07 input.tar.gz
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc      9396 Oct 12 03:07 init_data.xml
[2025-10-12 03:58:56] -rw-r--r-- 2 boinc boinc 222751817 Oct 12 03:07 EVNT.46676267._002481.pool.root.1
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc         0 Oct 12 03:07 boinc_setup_complete
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc         0 Oct 12 03:07 boinc_lockfile
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc      2550 Oct 12 03:07 pandaJob.out
[2025-10-12 03:58:56] -rw------- 1 boinc boinc    975496 Oct 12 03:07 agis_schedconf.cvmfs.json
[2025-10-12 03:58:56] -rw------- 1 boinc boinc   1560580 Oct 12 03:07 agis_ddmendpoints.agis.ALL.json
[2025-10-12 03:58:56] drwx------ 5 boinc boinc      4096 Oct 12 03:07 pilot3
[2025-10-12 03:58:56] -rw------- 1 boinc boinc 186562061 Oct 12 03:57 HITS.46676269._061770.pool.root.1
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc       529 Oct 12 03:57 boinc_task_state.xml
[2025-10-12 03:58:56] -rw------- 1 boinc boinc      1028 Oct 12 03:58 memory_monitor_summary.json
[2025-10-12 03:58:56] -rw------- 1 boinc boinc    377176 Oct 12 03:58 log.46676269._061770.job.log.tgz.1
[2025-10-12 03:58:56] -rw------- 1 boinc boinc        95 Oct 12 03:58 pilot_heartbeat.json
[2025-10-12 03:58:56] -rw------- 1 boinc boinc      7744 Oct 12 03:58 heartbeat.json
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc        27 Oct 12 03:58 wrapper_checkpoint.txt
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc      8192 Oct 12 03:58 boinc_mmap_file
[2025-10-12 03:58:56] -rw------- 1 boinc boinc       824 Oct 12 03:58 pilotlog.txt
[2025-10-12 03:58:56] -rw------- 1 boinc boinc    454529 Oct 12 03:58 log.46676269._061770.job.log.1
[2025-10-12 03:58:56] -rw------- 1 boinc boinc       357 Oct 12 03:58 output.list
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc       620 Oct 12 03:58 runtime_log
[2025-10-12 03:58:56] -rw------- 1 boinc boinc    849920 Oct 12 03:58 result.tar.gz
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc      8672 Oct 12 03:58 runtime_log.err
[2025-10-12 03:58:56] -rw------- 1 boinc boinc       643 Oct 12 03:58 CdrKDm6RsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmm3gNDm7UWCTn.diag
[2025-10-12 03:58:56] -rw-r--r-- 1 boinc boinc     21575 Oct 12 03:58 stderr.txt
[2025-10-12 03:58:56] HITS file was successfully produced:
[2025-10-12 03:58:56] -rw------- 1 boinc boinc 186562061 Oct 12 03:57 shared/HITS.pool.root.1
[2025-10-12 03:58:56]  *** Contents of shared directory: ***
[2025-10-12 03:58:56] total 401140
[2025-10-12 03:58:56] -rw-r--r-- 2 boinc boinc     15120 Oct 12 03:07 start_atlas.sh
[2025-10-12 03:58:56] -rw-r--r-- 2 boinc boinc    569680 Oct 12 03:07 input.tar.gz
[2025-10-12 03:58:56] -rw-r--r-- 2 boinc boinc 222751817 Oct 12 03:07 ATLAS.root_0
[2025-10-12 03:58:56] -rw------- 1 boinc boinc 186562061 Oct 12 03:57 HITS.pool.root.1
[2025-10-12 03:58:56] -rw------- 1 boinc boinc    849920 Oct 12 03:58 result.tar.gz
03:58:58 (3401431): run_atlas exited; CPU time 31503.847651
03:58:58 (3401431): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN