Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:12:16 (1168030): wrapper (7.7.26015): starting
19:12:16 (1168030): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 19:12:16] Arguments: --nthreads 12
[2025-10-11 19:12:16] Threads: 12
[2025-10-11 19:12:16] Checking for CVMFS
[2025-10-11 19:12:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:12:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:12:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:12:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:12:17] 2.11.5.0 2842 30839 217984 151602 0 797 38988573 45568000 26304 130560 0 322767297 99.863 141464208 25045 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 19:12:17] CVMFS is ok
[2025-10-11 19:12:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:12:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:12:17] Further information can be found at the LHC@home message board.
[2025-10-11 19:12:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:12:17] Checking for apptainer binary...
[2025-10-11 19:12:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:12:17] Running /usr/bin/apptainer --version
[2025-10-11 19:12:17] apptainer version 1.4.1-1.el9
[2025-10-11 19:12:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:12:17] wns0075.triumf.lcg
[2025-10-11 19:12:17] apptainer works
[2025-10-11 19:12:18] Set ATHENA_PROC_NUMBER=12
[2025-10-11 19:12:18] Set ATHENA_CORE_NUMBER=12
[2025-10-11 19:12:18] Starting ATLAS job with PandaID=6839162725
[2025-10-11 19:12:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:17:56]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:17:56] 2025-10-12 02:16:56,542 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | WARNING  | wrong length of table data, x=[1760235243.0], y=[1488.0] (must be same and length>=4)
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | could have reported an average CPU frequency of 2553 MHz (4 samples)
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | ..............................
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . Timing measurements:
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . get job = 0 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . initial setup = 3 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . payload setup = 20 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . stage-in = 0 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . payload execution = 47 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | . stage-out = 0 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | . log creation = 0 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | ..............................
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162725/pilotlog.txt
[2025-10-11 19:17:56] 2025-10-12 02:16:56,567 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 19:17:56] - Log from pilotlog.txt -
[2025-10-11 19:17:56] 2025-10-12 02:16:56,541 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839162725/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 19:17:56] 2025-10-12 02:16:56,542 | INFO     | extracted standard info from prmon json
[2025-10-11 19:17:56] 2025-10-12 02:16:56,542 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:17:56] 2025-10-12 02:16:56,542 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:17:56] 2025-10-12 02:16:56,542 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:17:56] 2025-10-12 02:16:56,542 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | WARNING  | wrong length of table data, x=[1760235243.0], y=[1488.0] (must be same and length>=4)
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | could have reported an average CPU frequency of 2553 MHz (4 samples)
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | ..............................
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . Timing measurements:
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . get job = 0 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . initial setup = 3 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . payload setup = 20 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . stage-in = 0 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . payload execution = 47 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | . stage-out = 0 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | . log creation = 0 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | ..............................
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162725/pilotlog.txt
[2025-10-11 19:17:56] 2025-10-12 02:16:56,567 | WARNING  | 
[2025-10-11 19:17:56] [begin log extracts]
[2025-10-11 19:17:56] - Log from pilotlog.txt -
[2025-10-11 19:17:56] 2025-10-12 02:16:56,541 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839162725/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 19:17:56] 2025-10-12 02:16:56,542 | INFO     | extracted standard info from prmon json
[2025-10-11 19:17:56] 2025-10-12 02:16:56,542 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:17:56] 2025-10-12 02:16:56,542 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:17:56] 2025-10-12 02:16:56,542 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:17:56] 2025-10-12 02:16:56,542 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | WARNING  | wrong length of table data, x=[1760235243.0], y=[1488.0] (must be same and length>=4)
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | could have reported an average CPU frequency of 2553 MHz (4 samples)
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | ..............................
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . Timing measurements:
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . get job = 0 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . initial setup = 3 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . payload setup = 20 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . stage-in = 0 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,544 | INFO     | . payload execution = 47 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | . stage-out = 0 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | . log creation = 0 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | ..............................
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 19:17:56] 2025-10-12 02:16:56,545 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162725/pilotlog.txt
[2025-10-11 19:17:56] [end log extracts]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,568 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 19:17:56] 2025-10-12 02:16:56,568 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 19:17:56] 2025-10-12 02:16:56,648 | INFO     | 
[2025-10-11 19:17:56] 2025-10-12 02:16:56,648 | INFO     | job summary report
[2025-10-11 19:17:56] 2025-10-12 02:16:56,648 | INFO     | --------------------------------------------------
[2025-10-11 19:17:56] 2025-10-12 02:16:56,648 | INFO     | PanDA job id: 6839162725
[2025-10-11 19:17:56] 2025-10-12 02:16:56,648 | INFO     | task id: 46676269
[2025-10-11 19:17:56] 2025-10-12 02:16:56,648 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 19:14:30,602 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 19:17:56] 2025-10-12 02:16:56,648 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:17:56] 2025-10-12 02:16:56,648 | INFO     | pilot state: failed 
[2025-10-11 19:17:56] 2025-10-12 02:16:56,648 | INFO     | transexitcode: 65
[2025-10-11 19:17:56] 2025-10-12 02:16:56,648 | INFO     | exeerrorcode: 65
[2025-10-11 19:17:56] 2025-10-12 02:16:56,648 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 19:17:56] 2025-10-12 02:16:56,648 | INFO     | exitcode: 65
[2025-10-11 19:17:56] 2025-10-12 02:16:56,648 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 19:17:56] 2025-10-12 02:16:56,649 | INFO     | cpuconsumptiontime: 20 s
[2025-10-11 19:17:56] 2025-10-12 02:16:56,649 | INFO     | nevents: 0
[2025-10-11 19:17:56] 2025-10-12 02:16:56,649 | INFO     | neventsw: 0
[2025-10-11 19:17:56] 2025-10-12 02:16:56,649 | INFO     | pid: 1190411
[2025-10-11 19:17:56] 2025-10-12 02:16:56,649 | INFO     | pgrp: 1190411
[2025-10-11 19:17:56] 2025-10-12 02:16:56,649 | INFO     | corecount: 12
[2025-10-11 19:17:56] 2025-10-12 02:16:56,649 | INFO     | event service: False
[2025-10-11 19:17:56] 2025-10-12 02:16:56,649 | INFO     | sizes: {0: 2348848, 11: 2348848, 15: 2349138, 22: 2349166, 71: 2372505, 72: 2372481, 73: 2376929, 76: 2376957, 210: 2377151}
[2025-10-11 19:17:56] 2025-10-12 02:16:56,649 | INFO     | --------------------------------------------------
[2025-10-11 19:17:56] 2025-10-12 02:16:56,649 | INFO     | 
[2025-10-11 19:17:56] 2025-10-12 02:16:56,649 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 19:17:56] 2025-10-12 02:16:56,715 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,715 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,716 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:17:56] 2025-10-12 02:16:56,717 | INFO     | job 6839162725 has completed (purged errors)
[2025-10-11 19:17:56] 2025-10-12 02:16:56,717 | INFO     | overall cleanup function is called
[2025-10-11 19:17:56] 2025-10-12 02:16:56,941 | INFO     | PID=1177675 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 19:17:56] 2025-10-12 02:16:56,941 | INFO     | .. there are 42 such processes running
[2025-10-11 19:17:56] 2025-10-12 02:16:57,731 | INFO     | --- collectZombieJob: --- 10, [1190411]
[2025-10-11 19:17:56] 2025-10-12 02:16:57,731 | INFO     | zombie collector waiting for pid 1190411
[2025-10-11 19:17:56] 2025-10-12 02:16:57,731 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:17:56] 2025-10-12 02:16:57,731 | INFO     | collected zombie processes
[2025-10-11 19:17:56] 2025-10-12 02:16:57,732 | INFO     | will attempt to kill all subprocesses of pid=1190411
[2025-10-11 19:17:56] 2025-10-12 02:16:58,088 | INFO     | process IDs to be killed: [1190411] (in reverse order)
[2025-10-11 19:17:56] 2025-10-12 02:16:58,233 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:17:56] 2025-10-12 02:16:58,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:17:56] 2025-10-12 02:16:58,257 | INFO     | did not find any defunct processes belonging to 1190411
[2025-10-11 19:17:56] 2025-10-12 02:16:58,274 | INFO     | did not find any defunct processes belonging to 1190411
[2025-10-11 19:17:56] 2025-10-12 02:16:58,275 | INFO     | ready for new job
[2025-10-11 19:17:56] 2025-10-12 02:16:58,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:17:56] 2025-10-12 02:16:58,276 | INFO     | ***************************************
[2025-10-11 19:17:56] 2025-10-12 02:16:58,276 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:17:56] 2025-10-12 02:16:58,277 | INFO     | ***************************************
[2025-10-11 19:17:56] 2025-10-12 02:16:58,277 | INFO     | 
[2025-10-11 19:17:56] 2025-10-12 02:16:58,279 | INFO     | architecture information:
[2025-10-11 19:17:56] 2025-10-12 02:16:58,280 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:17:56] 2025-10-12 02:16:58,314 | INFO     | cat /etc/os-release:
[2025-10-11 19:17:56] NAME="CentOS Linux"
[2025-10-11 19:17:56] VERSION="7 (Core)"
[2025-10-11 19:17:56] ID="centos"
[2025-10-11 19:17:56] ID_LIKE="rhel fedora"
[2025-10-11 19:17:56] VERSION_ID="7"
[2025-10-11 19:17:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:17:56] ANSI_COLOR="0;31"
[2025-10-11 19:17:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:17:56] HOME_URL="https://www.centos.org/"
[2025-10-11 19:17:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:17:56] 
[2025-10-11 19:17:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:17:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:17:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:17:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:17:56] 
[2025-10-11 19:17:56] 2025-10-12 02:16:58,315 | INFO     | ***************************************
[2025-10-11 19:17:56] 2025-10-12 02:16:58,819 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 19:17:56] 2025-10-12 02:16:58,877 | INFO     | sufficient remaining disk space (1732957437952 B)
[2025-10-11 19:17:56] 2025-10-12 02:16:58,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:17:56] 2025-10-12 02:16:58,877 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:17:56] 2025-10-12 02:16:58,877 | INFO     | update_server=False
[2025-10-11 19:17:56] 2025-10-12 02:16:58,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:17:56] 2025-10-12 02:16:58,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:17:56] 2025-10-12 02:16:59,285 | INFO     | all data control threads have been joined
[2025-10-11 19:17:56] 2025-10-12 02:16:59,338 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:17:56] 2025-10-12 02:16:59,338 | INFO     | aborting loop
[2025-10-11 19:17:56] 2025-10-12 02:16:59,500 | INFO     | all payload control threads have been joined
[2025-10-11 19:17:56] 2025-10-12 02:16:59,883 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:16:59,930 | INFO     | [job] validate thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:00,052 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:00,191 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:00,289 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:17:56] 2025-10-12 02:17:00,291 | INFO     | [data] control thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:00,312 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:00,343 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:00,350 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:00,506 | INFO     | [payload] control thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:00,550 | INFO     | all job control threads have been joined
[2025-10-11 19:17:56] 2025-10-12 02:17:00,619 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:00,885 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:01,062 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:01,070 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:01,555 | INFO     | [job] control thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:01,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:17:56] 2025-10-12 02:17:02,668 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:04,301 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:17:56] 2025-10-12 02:17:29,357 | INFO     | PID=1177675 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 19:17:56] 2025-10-12 02:17:29,357 | INFO     | .. there are 41 such processes running
[2025-10-11 19:17:56] 2025-10-12 02:17:29,357 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:17:56] 2025-10-12 02:17:29,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:17:56] 2025-10-12 02:17:29,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:17:56] 2025-10-12 02:17:48,518 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:17:56] 2025-10-12 02:17:50,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139990389155648)>', '<ExcThread(monitor, started 139989979469568)>']
[2025-10-11 19:17:56] 2025-10-12 02:17:50,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:17:56] 2025-10-12 02:17:50,480 | INFO     | [monitor] control thread has ended
[2025-10-11 19:17:56] 2025-10-12 02:17:55,382 | INFO     | all workflow threads have been joined
[2025-10-11 19:17:56] 2025-10-12 02:17:55,382 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:17:56] 2025-10-12 02:17:55,383 | INFO     | traces error code: 0
[2025-10-11 19:17:56] 2025-10-12 02:17:55,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:17:56] 2025-10-12 02:17:55,986 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:17:56] 2025-10-12 02:17:55,995 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:17:56] 2025-10-12 02:17:56,012 [wrapper] pilotpid: 1177675
[2025-10-11 19:17:56] 2025-10-12 02:17:56,040 [wrapper] Pilot exit status: 0
[2025-10-11 19:17:56] 2025-10-12 02:17:56,112 [wrapper] pandaids: 6839162725
[2025-10-11 19:17:56] 2025-10-12 02:17:56,228 [wrapper] cleanup supervisor_pilot 1177681 1177676
[2025-10-11 19:17:56] 2025-10-12 02:17:56,235 [wrapper] Test setup, not cleaning
[2025-10-11 19:17:56] 2025-10-12 02:17:56,239 [wrapper] apfmon messages muted
[2025-10-11 19:17:56] 2025-10-12 02:17:56,241 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:17:56] 2025-10-12 02:17:56,244 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:17:56]  *** Error codes and diagnostics ***
[2025-10-11 19:17:56]     "exeErrorCode": 65,
[2025-10-11 19:17:56]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 19:17:56]     "pilotErrorCode": 1305,
[2025-10-11 19:17:56]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 19:17:56]  *** Listing of results directory ***
[2025-10-11 19:17:56] total 218592
[2025-10-11 19:17:56] -rw-r--r--. 1 boinc boinc    557409 Oct 11 16:21 pilot3.tar.gz
[2025-10-11 19:17:56] -rwx------. 1 boinc boinc     36292 Oct 11 16:38 runpilot2-wrapper.sh
[2025-10-11 19:17:56] -rw-r--r--. 1 boinc boinc      5112 Oct 11 16:38 queuedata.json
[2025-10-11 19:17:56] -rw-r--r--. 1 boinc boinc       100 Oct 11 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:17:56] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 19:12 run_atlas
[2025-10-11 19:17:56] -rw-r--r--. 1 boinc boinc       105 Oct 11 19:12 job.xml
[2025-10-11 19:17:56] -rw-r--r--. 2 boinc boinc 219703531 Oct 11 19:12 EVNT.46676267._002729.pool.root.1
[2025-10-11 19:17:56] -rw-r--r--. 1 boinc boinc      6593 Oct 11 19:12 init_data.xml
[2025-10-11 19:17:56] -rw-r--r--. 2 boinc boinc     15120 Oct 11 19:12 start_atlas.sh
[2025-10-11 19:17:56] drwxrwx--x. 2 boinc boinc      4096 Oct 11 19:12 shared
[2025-10-11 19:17:56] -rw-r--r--. 2 boinc boinc    569671 Oct 11 19:12 input.tar.gz
[2025-10-11 19:17:56] -rw-r--r--. 1 boinc boinc         0 Oct 11 19:12 boinc_lockfile
[2025-10-11 19:17:56] -rw-r--r--. 1 boinc boinc      2547 Oct 11 19:12 pandaJob.out
[2025-10-11 19:17:56] -rw-------. 1 boinc boinc    975496 Oct 11 19:12 agis_schedconf.cvmfs.json
[2025-10-11 19:17:56] -rw-------. 1 boinc boinc   1560580 Oct 11 19:12 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:17:56] drwx------. 5 boinc boinc      4096 Oct 11 19:12 pilot3
[2025-10-11 19:17:56] -rw-r--r--. 1 boinc boinc       524 Oct 11 19:14 boinc_task_state.xml
[2025-10-11 19:17:56] -rw-------. 1 boinc boinc       952 Oct 11 19:14 memory_monitor_summary.json
[2025-10-11 19:17:56] -rw-------. 1 boinc boinc     22155 Oct 11 19:14 log.46676269._067148.job.log.tgz.1
[2025-10-11 19:17:56] -rw-------. 1 boinc boinc        95 Oct 11 19:16 pilot_heartbeat.json
[2025-10-11 19:17:56] -rw-------. 1 boinc boinc      8439 Oct 11 19:16 heartbeat.json
[2025-10-11 19:17:56] -rw-r--r--. 1 boinc boinc      8192 Oct 11 19:17 boinc_mmap_file
[2025-10-11 19:17:56] -rw-------. 1 boinc boinc      4823 Oct 11 19:17 pilotlog.txt
[2025-10-11 19:17:56] -rw-r--r--. 1 boinc boinc        23 Oct 11 19:17 wrapper_checkpoint.txt
[2025-10-11 19:17:56] -rw-------. 1 boinc boinc     92623 Oct 11 19:17 log.46676269._067148.job.log.1
[2025-10-11 19:17:56] -rw-------. 1 boinc boinc       188 Oct 11 19:17 output.list
[2025-10-11 19:17:56] -rw-r--r--. 1 boinc boinc       620 Oct 11 19:17 runtime_log
[2025-10-11 19:17:56] -rw-------. 1 boinc boinc    133120 Oct 11 19:17 result.tar.gz
[2025-10-11 19:17:56] -rw-r--r--. 1 boinc boinc      8528 Oct 11 19:17 runtime_log.err
[2025-10-11 19:17:56] -rw-------. 1 boinc boinc       647 Oct 11 19:17 ONBODmFLyR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmYoSMDmRfuDQn.diag
[2025-10-11 19:17:56] -rw-r--r--. 1 boinc boinc     21925 Oct 11 19:17 stderr.txt
[2025-10-11 19:17:56] No HITS result produced
[2025-10-11 19:17:56]  *** Contents of shared directory: ***
[2025-10-11 19:17:56] total 215268
[2025-10-11 19:17:56] -rw-r--r--. 2 boinc boinc 219703531 Oct 11 19:12 ATLAS.root_0
[2025-10-11 19:17:56] -rw-r--r--. 2 boinc boinc     15120 Oct 11 19:12 start_atlas.sh
[2025-10-11 19:17:56] -rw-r--r--. 2 boinc boinc    569671 Oct 11 19:12 input.tar.gz
[2025-10-11 19:17:56] -rw-------. 1 boinc boinc    133120 Oct 11 19:17 result.tar.gz
19:17:58 (1168030): run_atlas exited; CPU time 28.970105
19:17:58 (1168030): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN