Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:30 (3143211): wrapper (7.7.26015): starting
00:03:30 (3143211): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 00:03:30] Arguments: --nthreads 12
[2025-10-12 00:03:30] Threads: 12
[2025-10-12 00:03:30] Checking for CVMFS
[2025-10-12 00:03:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:03:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:03:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:03:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:03:31] 2.13.2.0 2191370 128756 506240 151606 1 918 29411594 32935936 43068 16776704 0 427916032 99.663 380447918 17165 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:03:31] CVMFS is ok
[2025-10-12 00:03:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:03:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:03:31] Further information can be found at the LHC@home message board.
[2025-10-12 00:03:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:03:31] Checking for apptainer binary...
[2025-10-12 00:03:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:03:31] Running /usr/bin/apptainer --version
[2025-10-12 00:03:31] apptainer version 1.4.3-1.el9
[2025-10-12 00:03:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:03:32] c7-2-14.aglt2.org
[2025-10-12 00:03:32] apptainer works
[2025-10-12 00:03:32] Set ATHENA_PROC_NUMBER=12
[2025-10-12 00:03:32] Set ATHENA_CORE_NUMBER=12
[2025-10-12 00:03:32] Starting ATLAS job with PandaID=6838775091
[2025-10-12 00:03:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 07:52:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 07:52:07] 2025-10-12 11:50:51,468 | INFO     | sum of square deviations: 27881196697.107212
[2025-10-12 07:52:07] 2025-10-12 11:50:51,507 | INFO     | sum of deviations: 67691834894.81239
[2025-10-12 07:52:07] 2025-10-12 11:50:51,507 | INFO     | mean x: 1760256161.544643
[2025-10-12 07:52:07] 2025-10-12 11:50:51,507 | INFO     | mean y: 2642994.234375
[2025-10-12 07:52:07] 2025-10-12 11:50:51,507 | INFO     | -- intersect: -4271024694.9369073
[2025-10-12 07:52:07] 2025-10-12 11:50:51,508 | INFO     | intersect: -4271024694.9369073
[2025-10-12 07:52:07] 2025-10-12 11:50:51,508 | INFO     | chi2: 0.18635961295117773
[2025-10-12 07:52:07] 2025-10-12 11:50:51,508 | INFO     | current chi2=0.18635961295117773 (change=42.180670679083754 %)
[2025-10-12 07:52:07] 2025-10-12 11:50:51,509 | INFO     | sum of square deviations: 26958047707.097065
[2025-10-12 07:52:07] 2025-10-12 11:50:51,516 | INFO     | sum of deviations: 33868544709.453728
[2025-10-12 07:52:07] 2025-10-12 11:50:51,517 | INFO     | mean x: 1760256314.0451467
[2025-10-12 07:52:07] 2025-10-12 11:50:51,517 | INFO     | mean y: 2648586.3273137696
[2025-10-12 07:52:07] 2025-10-12 11:50:51,517 | INFO     | -- intersect: -2208836470.75422
[2025-10-12 07:52:07] 2025-10-12 11:50:51,517 | INFO     | intersect: -2208836470.75422
[2025-10-12 07:52:07] 2025-10-12 11:50:51,518 | INFO     | chi2: 0.018197989492776925
[2025-10-12 07:52:07] 2025-10-12 11:50:51,518 | INFO     | current chi2=0.018197989492776925 (change=90.23501433352708 %)
[2025-10-12 07:52:07] 2025-10-12 11:50:51,526 | INFO     | sum of square deviations: 26055503754.586834
[2025-10-12 07:52:07] 2025-10-12 11:50:51,535 | INFO     | sum of deviations: 25851660926.780838
[2025-10-12 07:52:07] 2025-10-12 11:50:51,535 | INFO     | mean x: 1760256466.5456622
[2025-10-12 07:52:07] 2025-10-12 11:50:51,535 | INFO     | mean y: 2649938.4109589043
[2025-10-12 07:52:07] 2025-10-12 11:50:51,535 | INFO     | -- intersect: -1743835324.2008204
[2025-10-12 07:52:07] 2025-10-12 11:50:51,536 | INFO     | intersect: -1743835324.2008204
[2025-10-12 07:52:07] 2025-10-12 11:50:51,536 | INFO     | chi2: 0.00864794384930382
[2025-10-12 07:52:07] 2025-10-12 11:50:51,536 | INFO     | current chi2=0.00864794384930382 (change=52.47857543419108 %)
[2025-10-12 07:52:07] 2025-10-12 11:50:51,536 | INFO     | sum of square deviations: 25173332277.076466
[2025-10-12 07:52:07] 2025-10-12 11:50:51,543 | INFO     | sum of deviations: 21081046967.267895
[2025-10-12 07:52:07] 2025-10-12 11:50:51,543 | INFO     | mean x: 1760256619.0461893
[2025-10-12 07:52:07] 2025-10-12 11:50:51,544 | INFO     | mean y: 2650762.586605081
[2025-10-12 07:52:07] 2025-10-12 11:50:51,544 | INFO     | -- intersect: -1471450959.5103352
[2025-10-12 07:52:07] 2025-10-12 11:50:51,544 | INFO     | intersect: -1471450959.5103352
[2025-10-12 07:52:07] 2025-10-12 11:50:51,544 | INFO     | chi2: 0.00603344653750789
[2025-10-12 07:52:07] 2025-10-12 11:50:51,544 | INFO     | current chi2=0.00603344653750789 (change=30.23258889460069 %)
[2025-10-12 07:52:07] 2025-10-12 11:50:51,545 | INFO     | sum of square deviations: 24311300712.065254
[2025-10-12 07:52:07] 2025-10-12 11:50:51,553 | INFO     | sum of deviations: 17850369769.953274
[2025-10-12 07:52:07] 2025-10-12 11:50:51,554 | INFO     | mean x: 1760256771.546729
[2025-10-12 07:52:07] 2025-10-12 11:50:51,554 | INFO     | mean y: 2651333.7523364485
[2025-10-12 07:52:07] 2025-10-12 11:50:51,554 | INFO     | -- intersect: -1289802518.6480615
[2025-10-12 07:52:07] 2025-10-12 11:50:51,554 | INFO     | intersect: -1289802518.6480615
[2025-10-12 07:52:07] 2025-10-12 11:50:51,558 | INFO     | chi2: 0.004922556134028719
[2025-10-12 07:52:07] 2025-10-12 11:50:51,559 | INFO     | current chi2=0.004922556134028719 (change=18.412202653543744 %)
[2025-10-12 07:52:07] 2025-10-12 11:50:51,559 | INFO     | left removable region: 60
[2025-10-12 07:52:07] 2025-10-12 11:50:51,559 | INFO     | sum of square deviations: 18678164882.97959
[2025-10-12 07:52:07] 2025-10-12 11:50:51,567 | INFO     | sum of deviations: 16936251483.89796
[2025-10-12 07:52:07] 2025-10-12 11:50:51,567 | INFO     | mean x: 1760257503.5510204
[2025-10-12 07:52:07] 2025-10-12 11:50:51,567 | INFO     | mean y: 2651203.1301020407
[2025-10-12 07:52:07] 2025-10-12 11:50:51,567 | INFO     | -- intersect: -1593445840.8426018
[2025-10-12 07:52:07] 2025-10-12 11:50:51,567 | INFO     | intersect: -1593445840.8426018
[2025-10-12 07:52:07] 2025-10-12 11:50:51,568 | INFO     | chi2: 0.0029378688833358113
[2025-10-12 07:52:07] 2025-10-12 11:50:51,568 | INFO     | -- intersect: -1593445840.8426018
[2025-10-12 07:52:07] 2025-10-12 11:50:51,568 | INFO     | current memory leak: 0.91 B/s (using 392 data points, chi2=0.00)
[2025-10-12 07:52:07] 2025-10-12 11:50:51,569 | INFO     | could have reported an average CPU frequency of 3128 MHz (19 samples)
[2025-10-12 07:52:07] 2025-10-12 11:50:51,569 | INFO     | ..............................
[2025-10-12 07:52:07] 2025-10-12 11:50:51,569 | INFO     | . Timing measurements:
[2025-10-12 07:52:07] 2025-10-12 11:50:51,569 | INFO     | . get job = 0 s
[2025-10-12 07:52:07] 2025-10-12 11:50:51,569 | INFO     | . initial setup = 4 s
[2025-10-12 07:52:07] 2025-10-12 11:50:51,569 | INFO     | . payload setup = 18 s
[2025-10-12 07:52:07] 2025-10-12 11:50:51,569 | INFO     | . stage-in = 0 s
[2025-10-12 07:52:07] 2025-10-12 11:50:51,569 | INFO     | . payload execution = 27921 s
[2025-10-12 07:52:07] 2025-10-12 11:50:51,569 | INFO     | . stage-out = 6 s
[2025-10-12 07:52:07] 2025-10-12 11:50:51,569 | INFO     | . log creation = 0 s
[2025-10-12 07:52:07] 2025-10-12 11:50:51,569 | INFO     | ..............................
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | 
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | job summary report
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | --------------------------------------------------
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | PanDA job id: 6838775091
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | task id: 46676269
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | errors: (none)
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | pilot state: finished 
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | transexitcode: 0
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | exeerrorcode: 0
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | exeerrordiag: 
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | exitcode: 0
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | exitmsg: OK
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | cpuconsumptiontime: 36379 s
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | nevents: 400
[2025-10-12 07:52:07] 2025-10-12 11:50:53,714 | INFO     | neventsw: 0
[2025-10-12 07:52:07] 2025-10-12 11:50:53,715 | INFO     | pid: 3167891
[2025-10-12 07:52:07] 2025-10-12 11:50:53,715 | INFO     | pgrp: 3167891
[2025-10-12 07:52:07] 2025-10-12 11:50:53,715 | INFO     | corecount: 12
[2025-10-12 07:52:07] 2025-10-12 11:50:53,715 | INFO     | event service: False
[2025-10-12 07:52:07] 2025-10-12 11:50:53,715 | INFO     | sizes: {0: 2348686, 1: 2348885, 11: 2348885, 18: 2349175, 22: 2349203, 27945: 2386156, 27952: 2395154, 27956: 2395210, 27966: 2395404}
[2025-10-12 07:52:07] 2025-10-12 11:50:53,715 | INFO     | --------------------------------------------------
[2025-10-12 07:52:07] 2025-10-12 11:50:53,715 | INFO     | 
[2025-10-12 07:52:07] 2025-10-12 11:50:53,715 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-12 07:52:07] 2025-10-12 11:50:54,045 | INFO     | PID=3147626 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 07:52:07] 2025-10-12 11:50:54,046 | INFO     | .. there are 59 such processes running
[2025-10-12 07:52:07] 2025-10-12 11:50:54,157 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,157 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,157 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,157 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,158 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 07:52:07] 2025-10-12 11:50:54,159 | INFO     | job 6838775091 has completed (purged errors)
[2025-10-12 07:52:07] 2025-10-12 11:50:54,159 | INFO     | overall cleanup function is called
[2025-10-12 07:52:07] 2025-10-12 11:50:55,218 | INFO     | --- collectZombieJob: --- 10, [3167891]
[2025-10-12 07:52:07] 2025-10-12 11:50:55,218 | INFO     | zombie collector waiting for pid 3167891
[2025-10-12 07:52:07] 2025-10-12 11:50:55,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 07:52:07] 2025-10-12 11:50:55,218 | INFO     | collected zombie processes
[2025-10-12 07:52:07] 2025-10-12 11:50:55,218 | INFO     | will attempt to kill all subprocesses of pid=3167891
[2025-10-12 07:52:07] 2025-10-12 11:50:58,777 | INFO     | process IDs to be killed: [3167891] (in reverse order)
[2025-10-12 07:52:07] 2025-10-12 11:50:58,969 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 07:52:07] 2025-10-12 11:50:58,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 07:52:07] 2025-10-12 11:50:59,213 | INFO     | did not find any defunct processes belonging to 3167891
[2025-10-12 07:52:07] 2025-10-12 11:50:59,413 | INFO     | did not find any defunct processes belonging to 3167891
[2025-10-12 07:52:07] 2025-10-12 11:50:59,413 | INFO     | ready for new job
[2025-10-12 07:52:07] 2025-10-12 11:50:59,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 07:52:07] 2025-10-12 11:50:59,416 | INFO     | ***************************************
[2025-10-12 07:52:07] 2025-10-12 11:50:59,470 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 07:52:07] 2025-10-12 11:50:59,470 | INFO     | ***************************************
[2025-10-12 07:52:07] 2025-10-12 11:50:59,470 | INFO     | 
[2025-10-12 07:52:07] 2025-10-12 11:50:59,571 | INFO     | architecture information:
[2025-10-12 07:52:07] 2025-10-12 11:50:59,606 | INFO     | executing command: cat /etc/os-release
[2025-10-12 07:52:07] 2025-10-12 11:50:59,689 | INFO     | cat /etc/os-release:
[2025-10-12 07:52:07] NAME="CentOS Linux"
[2025-10-12 07:52:07] VERSION="7 (Core)"
[2025-10-12 07:52:07] ID="centos"
[2025-10-12 07:52:07] ID_LIKE="rhel fedora"
[2025-10-12 07:52:07] VERSION_ID="7"
[2025-10-12 07:52:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 07:52:07] ANSI_COLOR="0;31"
[2025-10-12 07:52:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 07:52:07] HOME_URL="https://www.centos.org/"
[2025-10-12 07:52:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 07:52:07] 
[2025-10-12 07:52:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 07:52:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 07:52:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 07:52:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 07:52:07] 
[2025-10-12 07:52:07] 2025-10-12 11:50:59,690 | INFO     | ***************************************
[2025-10-12 07:52:07] 2025-10-12 11:51:00,197 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-12 07:52:07] 2025-10-12 11:51:00,329 | INFO     | sufficient remaining disk space (73818701824 B)
[2025-10-12 07:52:07] 2025-10-12 11:51:00,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 07:52:07] 2025-10-12 11:51:00,329 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 07:52:07] 2025-10-12 11:51:00,329 | INFO     | update_server=False
[2025-10-12 07:52:07] 2025-10-12 11:51:00,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 07:52:07] 2025-10-12 11:51:00,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 07:52:07] 2025-10-12 11:51:00,676 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 07:52:07] 2025-10-12 11:51:00,676 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 07:52:07] 2025-10-12 11:51:00,677 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:52:07] 2025-10-12 11:51:00,677 | INFO     | will abort loop
[2025-10-12 07:52:07] 2025-10-12 11:51:01,078 | INFO     | all payload control threads have been joined
[2025-10-12 07:52:07] 2025-10-12 11:51:01,198 | INFO     | all data control threads have been joined
[2025-10-12 07:52:07] 2025-10-12 11:51:01,335 | INFO     | [job] retrieve thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:01,452 | INFO     | all job control threads have been joined
[2025-10-12 07:52:07] 2025-10-12 11:51:01,461 | INFO     | [data] copytool_in thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:01,461 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:01,695 | INFO     | [job] job monitor thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:01,869 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:01,895 | INFO     | [job] validate thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:02,070 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:02,104 | INFO     | [payload] control thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:02,140 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:02,207 | INFO     | [data] control thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:02,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 07:52:07] 2025-10-12 11:51:02,387 | INFO     | [data] copytool_out thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:02,459 | INFO     | [job] control thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:02,462 | INFO     | [payload] validate_post thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:02,463 | INFO     | [payload] failed_post thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:02,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 07:52:07] 2025-10-12 11:51:03,372 | INFO     | [job] queue monitor thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:06,961 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 07:52:07] 2025-10-12 11:51:29,185 | INFO     | PID=3147626 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 07:52:07] 2025-10-12 11:51:29,185 | INFO     | .. there are 59 such processes running
[2025-10-12 07:52:07] 2025-10-12 11:51:29,218 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 07:52:07] 2025-10-12 11:51:29,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 07:52:07] 2025-10-12 11:51:29,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 07:52:07] 2025-10-12 11:51:58,826 | INFO     | [monitor] cgroup control has ended
[2025-10-12 07:52:07] 2025-10-12 11:51:59,834 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140457169061696)>', '<ExcThread(monitor, started 140456662902528)>']
[2025-10-12 07:52:07] 2025-10-12 11:52:00,526 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 07:52:07] 2025-10-12 11:52:00,527 | INFO     | [monitor] control thread has ended
[2025-10-12 07:52:07] 2025-10-12 11:52:04,860 | INFO     | all workflow threads have been joined
[2025-10-12 07:52:07] 2025-10-12 11:52:04,860 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 07:52:07] 2025-10-12 11:52:04,860 | INFO     | traces error code: 0
[2025-10-12 07:52:07] 2025-10-12 11:52:04,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 07:52:07] 2025-10-12 11:52:05,789 [wrapper] ==== pilot stdout END ====
[2025-10-12 07:52:07] 2025-10-12 11:52:05,840 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 07:52:07] 2025-10-12 11:52:05,907 [wrapper] pilotpid: 3147626
[2025-10-12 07:52:07] 2025-10-12 11:52:05,946 [wrapper] Pilot exit status: 0
[2025-10-12 07:52:07] 2025-10-12 11:52:06,167 [wrapper] pandaids: 6838775091
[2025-10-12 07:52:07] 2025-10-12 11:52:06,660 [wrapper] cleanup supervisor_pilot  994901 3147627
[2025-10-12 07:52:07] 2025-10-12 11:52:06,696 [wrapper] Test setup, not cleaning
[2025-10-12 07:52:07] 2025-10-12 11:52:06,761 [wrapper] apfmon messages muted
[2025-10-12 07:52:07] 2025-10-12 11:52:06,812 [wrapper] ==== wrapper stdout END ====
[2025-10-12 07:52:07] 2025-10-12 11:52:06,877 [wrapper] ==== wrapper stderr END ====
[2025-10-12 07:52:07]  *** Error codes and diagnostics ***
[2025-10-12 07:52:07]     "exeErrorCode": 0,
[2025-10-12 07:52:07]     "exeErrorDiag": "",
[2025-10-12 07:52:07]     "pilotErrorCode": 0,
[2025-10-12 07:52:07]     "pilotErrorDiag": "",
[2025-10-12 07:52:07]  *** Listing of results directory ***
[2025-10-12 07:52:07] total 416584
[2025-10-12 07:52:07] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-12 07:52:07] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 14:34 queuedata.json
[2025-10-12 07:52:07] -rwx------. 1 boincer umatlas     36292 Oct 11 14:35 runpilot2-wrapper.sh
[2025-10-12 07:52:07] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 07:52:07] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:03 run_atlas
[2025-10-12 07:52:07] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:03 job.xml
[2025-10-12 07:52:07] -rw-r--r--. 2 boincer umatlas 219678579 Oct 12 00:03 EVNT.46676267._002523.pool.root.1
[2025-10-12 07:52:07] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:03 shared
[2025-10-12 07:52:07] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 00:03 input.tar.gz
[2025-10-12 07:52:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 07:52:07] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:03 boinc_lockfile
[2025-10-12 07:52:07] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:03 pandaJob.out
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas    975512 Oct 12 00:04 agis_schedconf.cvmfs.json
[2025-10-12 07:52:07] drwx------. 5 boincer umatlas      4096 Oct 12 00:04 pilot3
[2025-10-12 07:52:07] -rw-r--r--. 1 boincer umatlas      6935 Oct 12 07:48 init_data.xml
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas 194739542 Oct 12 07:49 HITS.46676269._062779.pool.root.1
[2025-10-12 07:52:07] -rw-r--r--. 1 boincer umatlas       531 Oct 12 07:50 boinc_task_state.xml
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas      1048 Oct 12 07:50 memory_monitor_summary.json
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas   1560580 Oct 12 07:50 agis_ddmendpoints.agis.ALL.json
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas    686713 Oct 12 07:50 log.46676269._062779.job.log.tgz.1
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas      7803 Oct 12 07:50 heartbeat.json
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas        95 Oct 12 07:51 pilot_heartbeat.json
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas      5010 Oct 12 07:52 pilotlog.txt
[2025-10-12 07:52:07] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 07:52 boinc_mmap_file
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas   3452206 Oct 12 07:52 log.46676269._062779.job.log.1
[2025-10-12 07:52:07] -rw-r--r--. 1 boincer umatlas        28 Oct 12 07:52 wrapper_checkpoint.txt
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas       357 Oct 12 07:52 output.list
[2025-10-12 07:52:07] -rw-r--r--. 1 boincer umatlas       620 Oct 12 07:52 runtime_log
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas   4157440 Oct 12 07:52 result.tar.gz
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas       662 Oct 12 07:52 Z6DNDmCctR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmMNSMDmFVZKrn.diag
[2025-10-12 07:52:07] -rw-r--r--. 1 boincer umatlas      8701 Oct 12 07:52 runtime_log.err
[2025-10-12 07:52:07] -rw-r--r--. 1 boincer umatlas     11500 Oct 12 07:52 stderr.txt
[2025-10-12 07:52:07] HITS file was successfully produced:
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas 194739542 Oct 12 07:49 shared/HITS.pool.root.1
[2025-10-12 07:52:07]  *** Contents of shared directory: ***
[2025-10-12 07:52:07] total 409348
[2025-10-12 07:52:07] -rw-r--r--. 2 boincer umatlas 219678579 Oct 12 00:03 ATLAS.root_0
[2025-10-12 07:52:07] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 00:03 input.tar.gz
[2025-10-12 07:52:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas 194739542 Oct 12 07:49 HITS.pool.root.1
[2025-10-12 07:52:07] -rw-------. 1 boincer umatlas   4157440 Oct 12 07:52 result.tar.gz
07:52:09 (3143211): run_atlas exited; CPU time 37641.487446
07:52:09 (3143211): called boinc_finish(0)

</stderr_txt>
]]>

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