Stderr output

<core_client_version>7.16.19</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 13:01:37 (62529): vboxwrapper version 26210
2025-10-12 13:01:37 (62529): BOINC client version: 7.16.19
2025-10-12 13:01:37 (62529): Detected: VirtualBox VboxManage Interface (Version: 5.0.26)
2025-10-12 13:01:37 (62529): Detected: Sandbox Configuration Enabled
2025-10-12 13:01:37 (62529): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 13:01:37 (62529): Create VM. (boinc_d3b4d0164cea0f07, slot#0)
2025-10-12 13:01:37 (62529): Setting Memory Size for VM. (4200MB)
2025-10-12 13:01:37 (62529): Setting CPU Count for VM. (2)
2025-10-12 13:01:37 (62529): Setting Chipset Options for VM.
2025-10-12 13:01:37 (62529): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 13:01:37 (62529): Setting Boot Options for VM.
2025-10-12 13:01:37 (62529): Setting Network Configuration for NAT. (Driver: 82540EM)
2025-10-12 13:01:37 (62529): Enabling VM Network Access.
2025-10-12 13:01:37 (62529): Disabling USB Support for VM.
2025-10-12 13:01:38 (62529): Disabling COM Port Support for VM.
2025-10-12 13:01:38 (62529): Disabling Audio Support for VM.
2025-10-12 13:01:38 (62529): Disabling Clipboard Support for VM.
2025-10-12 13:01:38 (62529): Disabling Drag and Drop Support for VM.
2025-10-12 13:01:38 (62529): Adding storage controller(s) to VM.
2025-10-12 13:01:38 (62529): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 13:01:38 (62529): Adding VirtualBox Guest Additions to VM.
2025-10-12 13:01:38 (62529): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 13:01:38 (62529): forwarding host port 64448 to guest port 80
2025-10-12 13:01:38 (62529): Enabling remote desktop for VM.
2025-10-12 13:01:38 (62529): Required extension pack not installed, remote desktop not enabled.
2025-10-12 13:01:38 (62529): Enabling shared directory for VM.
2025-10-12 13:01:38 (62529): Starting VM using VBoxManage interface. (boinc_d3b4d0164cea0f07, slot#0)
2025-10-12 13:01:40 (62529): Successfully started VM. (PID = '62596')
2025-10-12 13:01:40 (62529): Reporting VM Process ID to BOINC.
2025-10-12 13:01:40 (62529): Guest Log: BIOS: VirtualBox 5.0.26
2025-10-12 13:01:40 (62529): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 13:01:40 (62529): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 13:01:40 (62529): Detected: Web Application Enabled (http://localhost:64448)
2025-10-12 13:01:40 (62529): Preference change detected
2025-10-12 13:01:40 (62529): Setting CPU throttle for VM. (90%)
2025-10-12 13:01:40 (62529): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 13:01:42 (62529): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 13:01:42 (62529): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 13:01:45 (62529): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 13:01:45 (62529): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 13:01:45 (62529): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 13:01:51 (62529): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 13:01:51 (62529): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 13:02:02 (62529): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 13:02:02 (62529): Guest Log: 00:00:00.000281 main     Log opened 2025-10-12T11:02:01.068449000Z
2025-10-12 13:02:02 (62529): Guest Log: 00:00:00.000437 main     OS Product: Linux
2025-10-12 13:02:02 (62529): Guest Log: 00:00:00.000500 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 13:02:02 (62529): Guest Log: 00:00:00.000556 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 13:02:02 (62529): Guest Log: 00:00:00.000613 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 13:02:02 (62529): Guest Log: 00:00:00.000615 main     Process ID: 1264
2025-10-12 13:02:02 (62529): Guest Log: 00:00:00.000615 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 13:02:02 (62529): Guest Log: 00:00:00.002559 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 13:02:02 (62529): Guest Log: 00:00:00.004406 main     Error: Service 'control' failed to initialize: VERR_INVALID_PARAMETER
2025-10-12 13:02:02 (62529): Guest Log: 00:00:00.004614 main     Session 0 is about to close ...
2025-10-12 13:02:02 (62529): Guest Log: 00:00:00.004687 main     Stopping all guest processes ...
2025-10-12 13:02:02 (62529): Guest Log: 00:00:00.004743 main     Closing all guest files ...
2025-10-12 13:02:02 (62529): Guest Log: 00:00:00.004906 main     Ended.
2025-10-12 13:02:02 (62529): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 13:02:02 (62529): Guest Log: [INFO] Mounting shared directory
2025-10-12 13:02:02 (62529): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 13:02:46 (62529): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 13:02:46 (62529): Guest Log: [INFO] Detected branch: prod
2025-10-12 13:02:46 (62529): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 13:02:46 (62529): Guest Log: Copying input files
2025-10-12 13:02:49 (62529): Guest Log: Copied input files into RunAtlas.
2025-10-12 13:02:49 (62529): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 13:02:49 (62529): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 13:02:49 (62529): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 13:02:49 (62529): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 13:02:57 (62529): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 13:02:58 (62529): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 13:02:58 (62529): Guest Log: 2.6.3.0 1553 0 30076 151617 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 13:02:59 (62529): Guest Log: copied the webapp to /var/www
2025-10-12 13:02:59 (62529): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-12 13:02:59 (62529): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-12 13:02:59 (62529): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 13:02:59 (62529): Guest Log:  *** Starting ATLAS job. (PandaID=6838852661 taskID=46676269) ***
2025-10-12 14:41:19 (62529): Status Report: Elapsed Time: '6000.000000'
2025-10-12 14:41:19 (62529): Status Report: CPU Time: '10080.780000'
2025-10-12 16:20:59 (62529): Status Report: Elapsed Time: '12000.000000'
2025-10-12 16:20:59 (62529): Status Report: CPU Time: '20684.840000'
2025-10-12 18:00:38 (62529): Status Report: Elapsed Time: '18000.000000'
2025-10-12 18:00:38 (62529): Status Report: CPU Time: '31289.520000'
2025-10-12 19:40:18 (62529): Status Report: Elapsed Time: '24000.000000'
2025-10-12 19:40:18 (62529): Status Report: CPU Time: '41894.250000'
2025-10-12 20:57:56 (62529): VM state change detected. (old = 'running', new = 'paused')
2025-10-12 20:58:06 (62529): VM state change detected. (old = 'paused', new = 'running')
2025-10-12 21:20:09 (62529): Status Report: Elapsed Time: '30000.000000'
2025-10-12 21:20:09 (62529): Status Report: CPU Time: '52497.090000'
2025-10-12 22:59:48 (62529): Status Report: Elapsed Time: '36000.000000'
2025-10-12 22:59:48 (62529): Status Report: CPU Time: '63098.480000'
2025-10-12 23:21:46 (62529): Guest Log:  *** Job finished ***
2025-10-12 23:21:46 (62529): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:15,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:15,064 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:29,394 | INFO     | [monitor] cgroup control has ended
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:30,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956214155072)>', '<ExcThread(monitor, started 139955753948928)>']
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:31,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:31,100 | INFO     | [monitor] control thread has ended
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,601 | INFO     | all workflow threads have been joined
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,601 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,601 | INFO     | traces error code: 0
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,602 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,708 [wrapper] ==== pilot stdout END ====
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,717 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,725 [wrapper] pilotpid: 5922
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,732 [wrapper] Pilot exit status: 0
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,815 [wrapper] pandaids: 6838852661
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,865 [wrapper] cleanup supervisor_pilot 19386 5923
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,874 [wrapper] Test setup, not cleaning
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,882 [wrapper] apfmon messages muted
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,891 [wrapper] ==== wrapper stdout END ====
2025-10-12 23:21:46 (62529): Guest Log: 2025-10-12 21:21:35,900 [wrapper] ==== wrapper stderr END ====
2025-10-12 23:21:46 (62529): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 23:21:46 (62529): Guest Log:     "exeErrorCode": 0,
2025-10-12 23:21:46 (62529): Guest Log:     "exeErrorDiag": "",
2025-10-12 23:21:46 (62529): Guest Log:     "pilotErrorCode": 0,
2025-10-12 23:21:46 (62529): Guest Log:     "pilotErrorDiag": "",
2025-10-12 23:21:46 (62529): Guest Log:  *** Listing of results directory ***
2025-10-12 23:21:46 (62529): Guest Log: total 198724
2025-10-12 23:21:46 (62529): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 11 20:36 pilot3.tar.gz
2025-10-12 23:21:46 (62529): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 11 20:38 queuedata.json
2025-10-12 23:21:46 (62529): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 11 20:39 runpilot2-wrapper.sh
2025-10-12 23:21:46 (62529): Guest Log: -rw-r--r--. 1 atlas atlas      8378 Oct 12 11:02 init_data.xml
2025-10-12 23:21:46 (62529): Guest Log: -rw-r-----. 1 atlas atlas    569679 Oct 12 11:02 input.tar.gz
2025-10-12 23:21:46 (62529): Guest Log: -rw-r-----. 1 atlas atlas     15120 Oct 12 11:02 start_atlas.sh
2025-10-12 23:21:46 (62529): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 11:02 EVNT.46676267._002590.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 23:21:46 (62529): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 12 11:02 pandaJob.out
2025-10-12 23:21:46 (62529): Guest Log: -rw-------. 1 atlas atlas    975520 Oct 12 11:03 agis_schedconf.cvmfs.json
2025-10-12 23:21:46 (62529): Guest Log: drwx------. 5 atlas atlas      4096 Oct 12 11:03 pilot3
2025-10-12 23:21:46 (62529): Guest Log: -rw-------. 1 atlas atlas 188450461 Oct 12 21:19 HITS.46676269._064443.pool.root.1
2025-10-12 23:21:46 (62529): Guest Log: -rw-------. 1 atlas atlas      1041 Oct 12 21:20 memory_monitor_summary.json
2025-10-12 23:21:46 (62529): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 21:20 agis_ddmendpoints.agis.ALL.json
2025-10-12 23:21:46 (62529): Guest Log: -rw-------. 1 atlas atlas    666024 Oct 12 21:20 log.46676269._064443.job.log.tgz.1
2025-10-12 23:21:46 (62529): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 21:20 pilot_heartbeat.json
2025-10-12 23:21:46 (62529): Guest Log: -rw-------. 1 atlas atlas      7818 Oct 12 21:20 heartbeat.json
2025-10-12 23:21:46 (62529): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 12 21:21 pilotlog.txt
2025-10-12 23:21:46 (62529): Guest Log: -rw-------. 1 atlas atlas   4935713 Oct 12 21:21 log.46676269._064443.job.log.1
2025-10-12 23:21:46 (62529): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 21:21 output.list
2025-10-12 23:21:46 (62529): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 21:21 runtime_log
2025-10-12 23:21:46 (62529): Guest Log: -rw-------. 1 atlas atlas   5621760 Oct 12 21:21 result.tar.gz
2025-10-12 23:21:46 (62529): Guest Log: -rw-r--r--. 1 atlas atlas      8661 Oct 12 21:21 runtime_log.err
2025-10-12 23:21:46 (62529): Guest Log: -rw-------. 1 atlas atlas       667 Oct 12 21:21 QhNLDm3XvR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlXSMDmOkLYXn.diag
2025-10-12 23:21:46 (62529): Guest Log: Looking for outputfile HITS.46676269._064443.pool.root.1
2025-10-12 23:21:46 (62529): Guest Log: HITS file was successfully produced
2025-10-12 23:21:46 (62529): Guest Log: -rw-------. 1 atlas atlas 188450461 Oct 12 21:19 /home/atlas/RunAtlas/HITS.46676269._064443.pool.root.1
2025-10-12 23:21:46 (62529): Guest Log: Successfully finished the ATLAS job!
2025-10-12 23:21:46 (62529): Guest Log: Copying the results back to the shared directory!
2025-10-12 23:21:47 (62529): Guest Log:  *** Contents of shared directory: ***
2025-10-12 23:21:47 (62529): Guest Log: total 219048
2025-10-12 23:21:47 (62529): Guest Log: -rw-rw----. 1 root root 218079115 Oct 12 11:01 ATLAS.root_0
2025-10-12 23:21:47 (62529): Guest Log: -rw-rw-r--. 1 root root      8378 Oct 12 11:01 init_data.xml
2025-10-12 23:21:47 (62529): Guest Log: -rw-rw----. 1 root root    569679 Oct 12 11:01 input.tar.gz
2025-10-12 23:21:47 (62529): Guest Log: -rw-r--r--. 1 root root   5621760 Oct 12  2025 result.tar.gz
2025-10-12 23:21:47 (62529): Guest Log: -rw-rw----. 1 root root     15120 Oct 12 11:01 start_atlas.sh
2025-10-12 23:21:47 (62529): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 23:21:47 (62529): VM Completion File Detected.
2025-10-12 23:21:47 (62529): Powering off VM.
2025-10-12 23:21:47 (62529): Successfully stopped VM.
2025-10-12 23:21:47 (62529): Deregistering VM. (boinc_d3b4d0164cea0f07, slot#0)
2025-10-12 23:21:47 (62529): Removing network bandwidth throttle group from VM.
2025-10-12 23:21:47 (62529): Removing VM from VirtualBox.
2025-10-12 23:21:52 (62529): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN