Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:43:04 (2922140): wrapper (7.7.26015): starting
18:43:04 (2922140): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 18:43:04] Arguments: --nthreads 3
[2025-10-12 18:43:04] Threads: 3
[2025-10-12 18:43:04] Checking for CVMFS
[2025-10-12 18:43:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:43:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:43:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:43:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:43:04] 2.9.2.0 1564373 4521 85616 151627 0 56 4746244 36864000 0 130560 0 3551373 99.991 154900 891 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 18:43:04] CVMFS is ok
[2025-10-12 18:43:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:43:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:43:04] Further information can be found at the LHC@home message board.
[2025-10-12 18:43:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:43:04] Checking for apptainer binary...
[2025-10-12 18:43:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:43:04] Running /usr/bin/apptainer --version
[2025-10-12 18:43:04] apptainer version 1.4.1-1.1
[2025-10-12 18:43:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:43:04] thA371
[2025-10-12 18:43:04] apptainer works
[2025-10-12 18:43:04] Set ATHENA_PROC_NUMBER=3
[2025-10-12 18:43:04] Set ATHENA_CORE_NUMBER=3
[2025-10-12 18:43:04] Starting ATLAS job with PandaID=6838852981
[2025-10-12 18:43:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 20:06:40]  *** The last 200 lines of the pilot log: ***
[2025-10-12 20:06:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 20:06:40] ANSI_COLOR="0;31"
[2025-10-12 20:06:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 20:06:40] HOME_URL="https://www.centos.org/"
[2025-10-12 20:06:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 20:06:40] 
[2025-10-12 20:06:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 20:06:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 20:06:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 20:06:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 20:06:40] 
[2025-10-12 20:06:40] 2025-10-12 18:06:09,334 | INFO     | ***************************************
[2025-10-12 20:06:40] 2025-10-12 18:06:09,838 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 20:06:40] 2025-10-12 18:06:09,850 | INFO     | sufficient remaining disk space (355020570624 B)
[2025-10-12 20:06:40] 2025-10-12 18:06:09,851 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 20:06:40] 2025-10-12 18:06:09,851 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 20:06:40] 2025-10-12 18:06:09,851 | INFO     | update_server=False
[2025-10-12 20:06:40] 2025-10-12 18:06:09,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 20:06:40] 2025-10-12 18:06:09,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:06:40] 2025-10-12 18:06:09,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 20:06:40] 2025-10-12 18:06:09,851 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 20:06:40] 2025-10-12 18:06:09,923 | INFO     | all job control threads have been joined
[2025-10-12 20:06:40] 2025-10-12 18:06:10,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 20:06:40] 2025-10-12 18:06:10,200 | INFO     | aborting loop
[2025-10-12 20:06:40] 2025-10-12 18:06:10,295 | INFO     | all data control threads have been joined
[2025-10-12 20:06:40] 2025-10-12 18:06:10,325 | INFO     | all payload control threads have been joined
[2025-10-12 20:06:40] 2025-10-12 18:06:10,855 | INFO     | [job] queue monitor thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:10,855 | INFO     | [job] retrieve thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:10,928 | INFO     | [job] control thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:10,934 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:11,202 | INFO     | [job] job monitor thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:11,301 | INFO     | [data] control thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:11,331 | INFO     | [payload] control thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:11,369 | INFO     | [payload] failed_post thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:11,678 | INFO     | [data] copytool_in thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:11,857 | INFO     | [data] copytool_out thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:11,893 | INFO     | [payload] validate_post thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:12,246 | INFO     | [job] validate thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:12,290 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:12,290 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:13,857 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:14,846 | INFO     | [monitor] cgroup control has ended
[2025-10-12 20:06:40] 2025-10-12 18:06:19,934 | INFO     | job.realtimelogging is not enabled
[2025-10-12 20:06:40] 2025-10-12 18:06:20,940 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 20:06:40] 2025-10-12 18:06:22,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140558449243968)>', '<ExcThread(monitor, started 140557963749120)>']
[2025-10-12 20:06:40] 2025-10-12 18:06:27,285 | INFO     | all workflow threads have been joined
[2025-10-12 20:06:40] 2025-10-12 18:06:27,285 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 20:06:40] 2025-10-12 18:06:27,285 | INFO     | traces error code: 0
[2025-10-12 20:06:40] 2025-10-12 18:06:27,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 20:06:40] 2025-10-12 18:06:40,088 | INFO     | PID=2925857 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 20:06:40] 2025-10-12 18:06:40,089 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 20:06:40] 2025-10-12 18:06:40,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 20:06:40] 2025-10-12 18:06:40,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 20:06:40] 2025-10-12 18:06:40,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 20:06:40] 2025-10-12 18:06:40,089 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 20:06:40] 2025-10-12 18:06:40,089 | INFO     | [monitor] control thread has ended
[2025-10-12 20:06:40] 2025-10-12 18:06:40,137 [wrapper] ==== pilot stdout END ====
[2025-10-12 20:06:40] 2025-10-12 18:06:40,139 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 20:06:40] 2025-10-12 18:06:40,141 [wrapper] pilotpid: 2925857
[2025-10-12 20:06:40] 2025-10-12 18:06:40,144 [wrapper] Pilot exit status: 0
[2025-10-12 20:06:40] 2025-10-12 18:06:40,151 [wrapper] pandaids: 6838852981
[2025-10-12 20:06:40] 2025-10-12 18:06:40,166 [wrapper] cleanup supervisor_pilot 2944111 2925858
[2025-10-12 20:06:40] 2025-10-12 18:06:40,169 [wrapper] Test setup, not cleaning
[2025-10-12 20:06:40] 2025-10-12 18:06:40,171 [wrapper] apfmon messages muted
[2025-10-12 20:06:40] 2025-10-12 18:06:40,174 [wrapper] ==== wrapper stdout END ====
[2025-10-12 20:06:40] 2025-10-12 18:06:40,176 [wrapper] ==== wrapper stderr END ====
[2025-10-12 20:06:40]  *** Error codes and diagnostics ***
[2025-10-12 20:06:40]     "exeErrorCode": 0,
[2025-10-12 20:06:40]     "exeErrorDiag": "",
[2025-10-12 20:06:40]     "pilotErrorCode": 0,
[2025-10-12 20:06:40]     "pilotErrorDiag": "",
[2025-10-12 20:06:40]  *** Listing of results directory ***
[2025-10-12 20:06:40] total 419240
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc    557409 Oct 11 22:36 pilot3.tar.gz
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc      5112 Oct 11 22:40 queuedata.json
[2025-10-12 20:06:40] -rwx------ 1 boinc boinc     36292 Oct 11 22:42 runpilot2-wrapper.sh
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc       100 Oct 12 18:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 20:06:40] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 18:43 run_atlas
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc       105 Oct 12 18:43 job.xml
[2025-10-12 20:06:40] -rw-r--r-- 2 boinc boinc 224037175 Oct 12 18:43 EVNT.46676267._002598.pool.root.1
[2025-10-12 20:06:40] -rw-r--r-- 2 boinc boinc    569684 Oct 12 18:43 input.tar.gz
[2025-10-12 20:06:40] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:43 start_atlas.sh
[2025-10-12 20:06:40] drwxrwx--x 2 boinc boinc      4096 Oct 12 18:43 shared
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:43 boinc_setup_complete
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc      6438 Oct 12 18:43 init_data.xml
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:43 boinc_lockfile
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc      2550 Oct 12 18:43 pandaJob.out
[2025-10-12 20:06:40] -rw------- 1 boinc boinc    975528 Oct 12 18:43 agis_schedconf.cvmfs.json
[2025-10-12 20:06:40] -rw------- 1 boinc boinc   1560580 Oct 12 18:43 agis_ddmendpoints.agis.ALL.json
[2025-10-12 20:06:40] drwx------ 5 boinc boinc      4096 Oct 12 18:43 pilot3
[2025-10-12 20:06:40] -rw------- 1 boinc boinc 199412370 Oct 12 20:05 HITS.46676269._064617.pool.root.1
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc       530 Oct 12 20:05 boinc_task_state.xml
[2025-10-12 20:06:40] -rw------- 1 boinc boinc      1018 Oct 12 20:05 memory_monitor_summary.json
[2025-10-12 20:06:40] -rw------- 1 boinc boinc    248805 Oct 12 20:06 log.46676269._064617.job.log.tgz.1
[2025-10-12 20:06:40] -rw------- 1 boinc boinc      7765 Oct 12 20:06 heartbeat.json
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc        27 Oct 12 20:06 wrapper_checkpoint.txt
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc      8192 Oct 12 20:06 boinc_mmap_file
[2025-10-12 20:06:40] -rw------- 1 boinc boinc       817 Oct 12 20:06 pilotlog.txt
[2025-10-12 20:06:40] -rw------- 1 boinc boinc        95 Oct 12 20:06 pilot_heartbeat.json
[2025-10-12 20:06:40] -rw------- 1 boinc boinc    730975 Oct 12 20:06 log.46676269._064617.job.log.1
[2025-10-12 20:06:40] -rw------- 1 boinc boinc       357 Oct 12 20:06 output.list
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc       620 Oct 12 20:06 runtime_log
[2025-10-12 20:06:40] -rw------- 1 boinc boinc   1003520 Oct 12 20:06 result.tar.gz
[2025-10-12 20:06:40] -rw------- 1 boinc boinc       658 Oct 12 20:06 wupMDmqavR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCYSMDmhpEYNm.diag
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc      8777 Oct 12 20:06 runtime_log.err
[2025-10-12 20:06:40] -rw-r--r-- 1 boinc boinc      8693 Oct 12 20:06 stderr.txt
[2025-10-12 20:06:40] HITS file was successfully produced:
[2025-10-12 20:06:40] -rw------- 1 boinc boinc 199412370 Oct 12 20:05 shared/HITS.pool.root.1
[2025-10-12 20:06:40]  *** Contents of shared directory: ***
[2025-10-12 20:06:40] total 415092
[2025-10-12 20:06:40] -rw-r--r-- 2 boinc boinc 224037175 Oct 12 18:43 ATLAS.root_0
[2025-10-12 20:06:40] -rw-r--r-- 2 boinc boinc    569684 Oct 12 18:43 input.tar.gz
[2025-10-12 20:06:40] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:43 start_atlas.sh
[2025-10-12 20:06:40] -rw------- 1 boinc boinc 199412370 Oct 12 20:05 HITS.pool.root.1
[2025-10-12 20:06:40] -rw------- 1 boinc boinc   1003520 Oct 12 20:06 result.tar.gz
20:06:41 (2922140): run_atlas exited; CPU time 14281.777847
20:06:41 (2922140): called boinc_finish(0)

</stderr_txt>
]]>

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