Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:09:36 (2470721): wrapper (7.7.26015): starting
22:09:36 (2470721): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 22:09:36] Arguments: --nthreads 9
[2025-10-11 22:09:36] Threads: 9
[2025-10-11 22:09:36] Checking for CVMFS
[2025-10-11 22:09:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:09:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:09:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:09:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:09:37] 2.13.2.0 3269412 35108 363732 151603 1 125 28389486 40960001 49552 16776704 0 448320328 99.843 183281194 36801 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 22:09:37] CVMFS is ok
[2025-10-11 22:09:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:09:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:09:37] Further information can be found at the LHC@home message board.
[2025-10-11 22:09:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:09:37] Checking for apptainer binary...
[2025-10-11 22:09:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:09:37] Running /usr/bin/apptainer --version
[2025-10-11 22:09:37] apptainer version 1.4.3-1.el9
[2025-10-11 22:09:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:09:37] c8-16-2.aglt2.org
[2025-10-11 22:09:37] apptainer works
[2025-10-11 22:09:37] Set ATHENA_PROC_NUMBER=9
[2025-10-11 22:09:37] Set ATHENA_CORE_NUMBER=9
[2025-10-11 22:09:37] Starting ATLAS job with PandaID=6838772127
[2025-10-11 22:09:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:13:29]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:13:29] 2025-10-12 03:12:41,558 | INFO     | transferring file log.46676269._062188.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6838772127/log.46676269._062188.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 23:13:29] 2025-10-12 03:12:41,558 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6838772127/log.46676269._062188.job.log.tgz.1 /tmp/boinchome/slots/2/log.46676269._062188.job
[2025-10-11 23:13:29] 2025-10-12 03:12:41,656 | INFO     | adding to output.list: log.46676269._062188.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/ac/log.46676269._062188.job.log.tg
[2025-10-11 23:13:29] 2025-10-12 03:12:41,657 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 23:13:29] 2025-10-12 03:12:41,657 | INFO     | summary of transferred files:
[2025-10-11 23:13:29] 2025-10-12 03:12:41,657 | INFO     |  -- lfn=log.46676269._062188.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 23:13:29] 2025-10-12 03:12:41,657 | INFO     | stage-out finished correctly
[2025-10-11 23:13:29] 2025-10-12 03:12:41,853 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 23:13:29] 2025-10-12 03:12:43,025 | INFO     | time since job start (3752s) is within the limit (172800.0s)
[2025-10-11 23:13:29] 2025-10-12 03:12:43,057 | INFO     | monitor loop #256: job 0:6838772127 is in state 'finished'
[2025-10-11 23:13:29] 2025-10-12 03:12:43,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:13:29] 2025-10-12 03:12:44,176 | INFO     | job 6838772127 has state=finished
[2025-10-11 23:13:29] 2025-10-12 03:12:44,176 | INFO     | preparing for final server update for job 6838772127 in state='finished'
[2025-10-11 23:13:29] 2025-10-12 03:12:44,177 | INFO     | this job has now completed (state=finished)
[2025-10-11 23:13:29] 2025-10-12 03:12:44,177 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 23:13:29] 2025-10-12 03:12:44,177 | INFO     | log transfer has been attempted: DONE
[2025-10-11 23:13:29] 2025-10-12 03:12:44,177 | INFO     | job 6838772127 has finished - writing final server update
[2025-10-11 23:13:29] 2025-10-12 03:12:44,177 | INFO     | total number of processed events: 400 (read)
[2025-10-11 23:13:29] 2025-10-12 03:12:44,177 | INFO     | executing command: lscpu
[2025-10-11 23:13:29] 2025-10-12 03:12:44,303 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 23:13:29] 2025-10-12 03:12:45,045 | INFO     | time since job start (3754s) is within the limit (172800.0s)
[2025-10-11 23:13:29] 2025-10-12 03:12:45,562 | INFO     | monitor loop #257: job 0:6838772127 is in state 'finished'
[2025-10-11 23:13:29] 2025-10-12 03:12:45,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:13:29] 2025-10-12 03:12:47,052 | INFO     | time since job start (3756s) is within the limit (172800.0s)
[2025-10-11 23:13:29] 2025-10-12 03:12:48,067 | INFO     | monitor loop #258: job 0:6838772127 is in state 'finished'
[2025-10-11 23:13:29] 2025-10-12 03:12:48,067 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:13:29] 2025-10-12 03:12:49,059 | INFO     | time since job start (3758s) is within the limit (172800.0s)
[2025-10-11 23:13:29] 2025-10-12 03:12:50,572 | INFO     | monitor loop #259: job 0:6838772127 is in state 'finished'
[2025-10-11 23:13:29] 2025-10-12 03:12:50,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:13:29] 2025-10-12 03:12:51,066 | INFO     | time since job start (3760s) is within the limit (172800.0s)
[2025-10-11 23:13:29] 2025-10-12 03:12:53,075 | INFO     | monitor loop #260: job 0:6838772127 is in state 'finished'
[2025-10-11 23:13:29] 2025-10-12 03:12:53,075 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:13:29] 2025-10-12 03:12:53,084 | INFO     | time since job start (3762s) is within the limit (172800.0s)
[2025-10-11 23:13:29] 2025-10-12 03:12:55,121 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 23:13:29] 2025-10-12 03:12:55,126 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3795.691453125
[2025-10-11 23:13:29] 2025-10-12 03:12:55,187 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6838772127/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:13:29] 2025-10-12 03:12:55,187 | INFO     | extracted standard info from prmon json
[2025-10-11 23:13:29] 2025-10-12 03:12:55,187 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:13:29] 2025-10-12 03:12:55,187 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:13:29] 2025-10-12 03:12:55,188 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:13:29] 2025-10-12 03:12:55,188 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:13:29] 2025-10-12 03:12:55,188 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | sum of square deviations: 48810217.5
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | sum of deviations: 693800854.4999999
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | mean x: 1760237012.5
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | mean y: 2204772.092592593
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | -- intersect: -25018252131.1168
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | intersect: -25018252131.1168
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | chi2: 0.018581884377026656
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | -- intersect: -25018252131.1168
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | current memory leak: 14.21 B/s (using 54 data points, chi2=0.02)
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | could have reported an average CPU frequency of 3797 MHz (6 samples)
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | ..............................
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | . Timing measurements:
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | . get job = 0 s
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | . initial setup = 3 s
[2025-10-11 23:13:29] 2025-10-12 03:12:55,189 | INFO     | . payload setup = 22 s
[2025-10-11 23:13:29] 2025-10-12 03:12:55,190 | INFO     | . stage-in = 0 s
[2025-10-11 23:13:29] 2025-10-12 03:12:55,190 | INFO     | . payload execution = 3682 s
[2025-10-11 23:13:29] 2025-10-12 03:12:55,190 | INFO     | . stage-out = 1 s
[2025-10-11 23:13:29] 2025-10-12 03:12:55,202 | INFO     | . log creation = 0 s
[2025-10-11 23:13:29] 2025-10-12 03:12:55,202 | INFO     | ..............................
[2025-10-11 23:13:29] 2025-10-12 03:12:55,266 | INFO     | 
[2025-10-11 23:13:29] 2025-10-12 03:12:55,266 | INFO     | job summary report
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | --------------------------------------------------
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | PanDA job id: 6838772127
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | task id: 46676269
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | errors: (none)
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | pilot state: finished 
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | transexitcode: 0
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | exeerrorcode: 0
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | exeerrordiag: 
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | exitcode: 0
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | exitmsg: OK
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | cpuconsumptiontime: 22354 s
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | nevents: 400
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | neventsw: 0
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | pid: 2496060
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | pgrp: 2496060
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | corecount: 9
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | event service: False
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | sizes: {0: 2347974, 1: 2348830, 12: 2348830, 18: 2349120, 22: 2349148, 3708: 2375116, 3711: 2384170, 3724: 2384308}
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | --------------------------------------------------
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | 
[2025-10-11 23:13:29] 2025-10-12 03:12:55,267 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 23:13:29] 2025-10-12 03:12:55,288 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,289 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:13:29] 2025-10-12 03:12:55,290 | INFO     | job 6838772127 has completed (purged errors)
[2025-10-11 23:13:29] 2025-10-12 03:12:55,290 | INFO     | overall cleanup function is called
[2025-10-11 23:13:29] 2025-10-12 03:12:56,040 | INFO     | PID=2477889 has CPU usage=12.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 23:13:29] 2025-10-12 03:12:56,040 | INFO     | .. there are 72 such processes running
[2025-10-11 23:13:29] 2025-10-12 03:12:56,304 | INFO     | --- collectZombieJob: --- 10, [2496060]
[2025-10-11 23:13:29] 2025-10-12 03:12:56,304 | INFO     | zombie collector waiting for pid 2496060
[2025-10-11 23:13:29] 2025-10-12 03:12:56,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:13:29] 2025-10-12 03:12:56,304 | INFO     | collected zombie processes
[2025-10-11 23:13:29] 2025-10-12 03:12:56,304 | INFO     | will attempt to kill all subprocesses of pid=2496060
[2025-10-11 23:13:29] 2025-10-12 03:12:57,897 | INFO     | process IDs to be killed: [2496060] (in reverse order)
[2025-10-11 23:13:29] 2025-10-12 03:12:58,184 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:13:29] 2025-10-12 03:12:58,184 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:13:29] 2025-10-12 03:12:58,230 | INFO     | did not find any defunct processes belonging to 2496060
[2025-10-11 23:13:29] 2025-10-12 03:12:58,264 | INFO     | did not find any defunct processes belonging to 2496060
[2025-10-11 23:13:29] 2025-10-12 03:12:58,264 | INFO     | ready for new job
[2025-10-11 23:13:29] 2025-10-12 03:12:58,265 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:13:29] 2025-10-12 03:12:58,266 | INFO     | ***************************************
[2025-10-11 23:13:29] 2025-10-12 03:12:58,266 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:13:29] 2025-10-12 03:12:58,266 | INFO     | ***************************************
[2025-10-11 23:13:29] 2025-10-12 03:12:58,266 | INFO     | 
[2025-10-11 23:13:29] 2025-10-12 03:12:58,288 | INFO     | architecture information:
[2025-10-11 23:13:29] 2025-10-12 03:12:58,291 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:13:29] 2025-10-12 03:12:58,322 | INFO     | cat /etc/os-release:
[2025-10-11 23:13:29] NAME="CentOS Linux"
[2025-10-11 23:13:29] VERSION="7 (Core)"
[2025-10-11 23:13:29] ID="centos"
[2025-10-11 23:13:29] ID_LIKE="rhel fedora"
[2025-10-11 23:13:29] VERSION_ID="7"
[2025-10-11 23:13:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:13:29] ANSI_COLOR="0;31"
[2025-10-11 23:13:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:13:29] HOME_URL="https://www.centos.org/"
[2025-10-11 23:13:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:13:29] 
[2025-10-11 23:13:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:13:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:13:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:13:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:13:29] 
[2025-10-11 23:13:29] 2025-10-12 03:12:58,322 | INFO     | ***************************************
[2025-10-11 23:13:29] 2025-10-12 03:12:58,833 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 23:13:29] 2025-10-12 03:12:58,850 | INFO     | sufficient remaining disk space (168137064448 B)
[2025-10-11 23:13:29] 2025-10-12 03:12:58,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:13:29] 2025-10-12 03:12:58,850 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:13:29] 2025-10-12 03:12:58,850 | INFO     | update_server=False
[2025-10-11 23:13:29] 2025-10-12 03:12:58,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:13:29] 2025-10-12 03:12:59,117 | INFO     | all data control threads have been joined
[2025-10-11 23:13:29] 2025-10-12 03:12:59,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:13:29] 2025-10-12 03:12:59,124 | INFO     | aborting loop
[2025-10-11 23:13:29] 2025-10-12 03:12:59,384 | INFO     | all payload control threads have been joined
[2025-10-11 23:13:29] 2025-10-12 03:12:59,846 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:13:29] 2025-10-12 03:12:59,855 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:12:59,936 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:12:59,988 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:00,098 | INFO     | all job control threads have been joined
[2025-10-11 23:13:29] 2025-10-12 03:13:00,113 | INFO     | [job] validate thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:00,123 | INFO     | [data] control thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:00,130 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:00,280 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:13:29] 2025-10-12 03:13:00,390 | INFO     | [payload] control thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:00,438 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:00,501 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:00,506 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:01,104 | INFO     | [job] control thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:01,286 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:01,367 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:01,458 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:13:29] 2025-10-12 03:13:01,853 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:05,466 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:09,798 | INFO     | job.realtimelogging is not enabled
[2025-10-11 23:13:29] 2025-10-12 03:13:10,803 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:13:29] 2025-10-12 03:13:17,055 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:13:29] 2025-10-12 03:13:18,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139956412938048)>', '<ExcThread(monitor, started 139955930130176)>']
[2025-10-11 23:13:29] 2025-10-12 03:13:23,732 | INFO     | all workflow threads have been joined
[2025-10-11 23:13:29] 2025-10-12 03:13:23,732 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:13:29] 2025-10-12 03:13:23,732 | INFO     | traces error code: 0
[2025-10-11 23:13:29] 2025-10-12 03:13:23,732 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:13:29] 2025-10-12 03:13:28,952 | INFO     | PID=2477889 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 23:13:29] 2025-10-12 03:13:28,952 | INFO     | .. there are 71 such processes running
[2025-10-11 23:13:29] 2025-10-12 03:13:28,953 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:13:29] 2025-10-12 03:13:28,953 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:13:29] 2025-10-12 03:13:28,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:13:29] 2025-10-12 03:13:28,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:13:29] 2025-10-12 03:13:28,953 | INFO     | [monitor] control thread has ended
[2025-10-11 23:13:29] 2025-10-12 03:13:29,085 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:13:29] 2025-10-12 03:13:29,099 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:13:29] 2025-10-12 03:13:29,119 [wrapper] pilotpid: 2477889
[2025-10-11 23:13:29] 2025-10-12 03:13:29,130 [wrapper] Pilot exit status: 0
[2025-10-11 23:13:29] 2025-10-12 03:13:29,174 [wrapper] pandaids: 6838772127
[2025-10-11 23:13:29] 2025-10-12 03:13:29,354 [wrapper] cleanup supervisor_pilot 2949439 2477891
[2025-10-11 23:13:29] 2025-10-12 03:13:29,360 [wrapper] Test setup, not cleaning
[2025-10-11 23:13:29] 2025-10-12 03:13:29,362 [wrapper] apfmon messages muted
[2025-10-11 23:13:29] 2025-10-12 03:13:29,364 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:13:29] 2025-10-12 03:13:29,366 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:13:29]  *** Error codes and diagnostics ***
[2025-10-11 23:13:29]     "exeErrorCode": 0,
[2025-10-11 23:13:29]     "exeErrorDiag": "",
[2025-10-11 23:13:29]     "pilotErrorCode": 0,
[2025-10-11 23:13:29]     "pilotErrorDiag": "",
[2025-10-11 23:13:29]  *** Listing of results directory ***
[2025-10-11 23:13:29] total 407968
[2025-10-11 23:13:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 13:33 pilot3.tar.gz
[2025-10-11 23:13:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 13:43 queuedata.json
[2025-10-11 23:13:29] -rwx------. 1 boincer umatlas     36292 Oct 11 13:45 runpilot2-wrapper.sh
[2025-10-11 23:13:29] -rw-r--r--. 1 boincer umatlas       100 Oct 11 22:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:13:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 22:09 run_atlas
[2025-10-11 23:13:29] -rw-r--r--. 1 boincer umatlas       105 Oct 11 22:09 job.xml
[2025-10-11 23:13:29] -rw-r--r--. 2 boincer umatlas 219030404 Oct 11 22:09 EVNT.46676267._000941.pool.root.1
[2025-10-11 23:13:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:09 start_atlas.sh
[2025-10-11 23:13:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 22:09 shared
[2025-10-11 23:13:29] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 22:09 input.tar.gz
[2025-10-11 23:13:29] -rw-r--r--. 1 boincer umatlas         0 Oct 11 22:09 boinc_lockfile
[2025-10-11 23:13:29] -rw-r--r--. 1 boincer umatlas      2547 Oct 11 22:09 pandaJob.out
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas    975496 Oct 11 22:10 agis_schedconf.cvmfs.json
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas   1560580 Oct 11 22:10 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:13:29] drwx------. 5 boincer umatlas      4096 Oct 11 22:10 pilot3
[2025-10-11 23:13:29] -rw-r--r--. 1 boincer umatlas      7161 Oct 11 23:03 init_data.xml
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas 193123834 Oct 11 23:12 HITS.46676269._062188.pool.root.1
[2025-10-11 23:13:29] -rw-r--r--. 1 boincer umatlas       529 Oct 11 23:12 boinc_task_state.xml
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas      1034 Oct 11 23:12 memory_monitor_summary.json
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas    314532 Oct 11 23:12 log.46676269._062188.job.log.tgz.1
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas      7775 Oct 11 23:12 heartbeat.json
[2025-10-11 23:13:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 23:13 boinc_mmap_file
[2025-10-11 23:13:29] -rw-r--r--. 1 boincer umatlas        27 Oct 11 23:13 wrapper_checkpoint.txt
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas       823 Oct 11 23:13 pilotlog.txt
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas        95 Oct 11 23:13 pilot_heartbeat.json
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas    538007 Oct 11 23:13 log.46676269._062188.job.log.1
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas       357 Oct 11 23:13 output.list
[2025-10-11 23:13:29] -rw-r--r--. 1 boincer umatlas       620 Oct 11 23:13 runtime_log
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas    870400 Oct 11 23:13 result.tar.gz
[2025-10-11 23:13:29] -rw-r--r--. 1 boincer umatlas      8698 Oct 11 23:13 runtime_log.err
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas       651 Oct 11 23:13 qRaLDmwpsR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmY9gNDm5aY3Pn.diag
[2025-10-11 23:13:29] -rw-r--r--. 1 boincer umatlas     22537 Oct 11 23:13 stderr.txt
[2025-10-11 23:13:29] HITS file was successfully produced:
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas 193123834 Oct 11 23:12 shared/HITS.pool.root.1
[2025-10-11 23:13:29]  *** Contents of shared directory: ***
[2025-10-11 23:13:29] total 403932
[2025-10-11 23:13:29] -rw-r--r--. 2 boincer umatlas 219030404 Oct 11 22:09 ATLAS.root_0
[2025-10-11 23:13:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:09 start_atlas.sh
[2025-10-11 23:13:29] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 22:09 input.tar.gz
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas 193123834 Oct 11 23:12 HITS.pool.root.1
[2025-10-11 23:13:29] -rw-------. 1 boincer umatlas    870400 Oct 11 23:13 result.tar.gz
23:13:30 (2470721): run_atlas exited; CPU time 22446.990031
23:13:30 (2470721): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN