Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:57:23 (1011501): wrapper (7.7.26015): starting
21:57:23 (1011501): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:57:23] Arguments: --nthreads 8
[2025-10-11 21:57:23] Threads: 8
[2025-10-11 21:57:23] Checking for CVMFS
[2025-10-11 21:57:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:57:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:57:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:57:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:57:26] 2.13.2.0 6302 43630 264080 151602 2 491 27444339 32935936 28166 16776704 0 129959321 99.641 119043335 30333 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 21:57:26] CVMFS is ok
[2025-10-11 21:57:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:57:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:57:26] Further information can be found at the LHC@home message board.
[2025-10-11 21:57:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:57:26] Checking for apptainer binary...
[2025-10-11 21:57:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:57:26] Running /usr/bin/apptainer --version
[2025-10-11 21:57:26] apptainer version 1.4.3-1.el9
[2025-10-11 21:57:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:57:27] c6-1-24-4.aglt2.org
[2025-10-11 21:57:27] apptainer works
[2025-10-11 21:57:27] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:57:27] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:57:27] Starting ATLAS job with PandaID=6838852949
[2025-10-11 21:57:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:03:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:03:06] 2025-10-12 12:01:53,218 | INFO     | sum of square deviations: 62076491482.91667
[2025-10-12 08:03:06] 2025-10-12 12:01:53,224 | INFO     | sum of deviations: 249823966793.2994
[2025-10-12 08:03:06] 2025-10-12 12:01:53,225 | INFO     | mean x: 1760252315.0119658
[2025-10-12 08:03:06] 2025-10-12 12:01:53,225 | INFO     | mean y: 2087955.9572649573
[2025-10-12 08:03:06] 2025-10-12 12:01:53,225 | INFO     | -- intersect: -7081966013.400796
[2025-10-12 08:03:06] 2025-10-12 12:01:53,225 | INFO     | intersect: -7081966013.400796
[2025-10-12 08:03:06] 2025-10-12 12:01:53,225 | INFO     | chi2: 5.940735478957462
[2025-10-12 08:03:06] 2025-10-12 12:01:53,226 | INFO     | current chi2=5.940735478957462 (change=9.984335955826387 %)
[2025-10-12 08:03:06] 2025-10-12 12:01:53,226 | INFO     | right removable region: 584
[2025-10-12 08:03:06] 2025-10-12 12:01:53,226 | INFO     | sum of square deviations: 62076130362.916626
[2025-10-12 08:03:06] 2025-10-12 12:01:53,240 | INFO     | sum of deviations: 72256638043.00342
[2025-10-12 08:03:06] 2025-10-12 12:01:53,240 | INFO     | mean x: 1760252620.0119658
[2025-10-12 08:03:06] 2025-10-12 12:01:53,240 | INFO     | mean y: 2098473.570940171
[2025-10-12 08:03:06] 2025-10-12 12:01:53,240 | INFO     | -- intersect: -2046836208.4857628
[2025-10-12 08:03:06] 2025-10-12 12:01:53,240 | INFO     | intersect: -2046836208.4857628
[2025-10-12 08:03:06] 2025-10-12 12:01:53,241 | INFO     | chi2: 3.423758328801599
[2025-10-12 08:03:06] 2025-10-12 12:01:53,241 | INFO     | current chi2=3.423758328801599 (change=48.122268600329846 %)
[2025-10-12 08:03:06] 2025-10-12 12:01:53,242 | INFO     | sum of square deviations: 60497814590.82767
[2025-10-12 08:03:06] 2025-10-12 12:01:53,253 | INFO     | sum of deviations: -13502738032.413755
[2025-10-12 08:03:06] 2025-10-12 12:01:53,253 | INFO     | mean x: 1760252772.5172415
[2025-10-12 08:03:06] 2025-10-12 12:01:53,253 | INFO     | mean y: 2106749.8913793103
[2025-10-12 08:03:06] 2025-10-12 12:01:53,253 | INFO     | -- intersect: 394984281.400326
[2025-10-12 08:03:06] 2025-10-12 12:01:53,253 | INFO     | intersect: 394984281.400326
[2025-10-12 08:03:06] 2025-10-12 12:01:53,254 | INFO     | chi2: 2.265705626879243
[2025-10-12 08:03:06] 2025-10-12 12:01:53,254 | INFO     | current chi2=2.265705626879243 (change=33.824020001075944 %)
[2025-10-12 08:03:06] 2025-10-12 12:01:53,254 | INFO     | sum of square deviations: 58946511937.74961
[2025-10-12 08:03:06] 2025-10-12 12:01:53,315 | INFO     | sum of deviations: -82397950626.38608
[2025-10-12 08:03:06] 2025-10-12 12:01:53,316 | INFO     | mean x: 1760252925.0208695
[2025-10-12 08:03:06] 2025-10-12 12:01:53,316 | INFO     | mean y: 2113523.532173913
[2025-10-12 08:03:06] 2025-10-12 12:01:53,316 | INFO     | -- intersect: 2462670201.745669
[2025-10-12 08:03:06] 2025-10-12 12:01:53,316 | INFO     | intersect: 2462670201.745669
[2025-10-12 08:03:06] 2025-10-12 12:01:53,317 | INFO     | chi2: 1.5336877049203697
[2025-10-12 08:03:06] 2025-10-12 12:01:53,317 | INFO     | current chi2=1.5336877049203697 (change=32.30860678786177 %)
[2025-10-12 08:03:06] 2025-10-12 12:01:53,317 | INFO     | sum of square deviations: 57421953726.15638
[2025-10-12 08:03:06] 2025-10-12 12:01:53,377 | INFO     | sum of deviations: -124141071144.39476
[2025-10-12 08:03:06] 2025-10-12 12:01:53,377 | INFO     | mean x: 1760253077.5245614
[2025-10-12 08:03:06] 2025-10-12 12:01:53,377 | INFO     | mean y: 2117692.9210526315
[2025-10-12 08:03:06] 2025-10-12 12:01:53,377 | INFO     | -- intersect: 3807625662.420497
[2025-10-12 08:03:06] 2025-10-12 12:01:53,378 | INFO     | intersect: 3807625662.420497
[2025-10-12 08:03:06] 2025-10-12 12:01:53,378 | INFO     | chi2: 1.2245241624218104
[2025-10-12 08:03:06] 2025-10-12 12:01:53,378 | INFO     | current chi2=1.2245241624218104 (change=20.15818093257853 %)
[2025-10-12 08:03:06] 2025-10-12 12:01:53,378 | INFO     | left removable region: 40
[2025-10-12 08:03:06] 2025-10-12 12:01:53,379 | INFO     | sum of square deviations: 49916885895.1103
[2025-10-12 08:03:06] 2025-10-12 12:01:53,442 | INFO     | sum of deviations: -123371833657.13968
[2025-10-12 08:03:06] 2025-10-12 12:01:53,442 | INFO     | mean x: 1760253504.5404413
[2025-10-12 08:03:06] 2025-10-12 12:01:53,442 | INFO     | mean y: 2124725.4154411764
[2025-10-12 08:03:06] 2025-10-12 12:01:53,442 | INFO     | -- intersect: 4352670611.088037
[2025-10-12 08:03:06] 2025-10-12 12:01:53,442 | INFO     | intersect: 4352670611.088037
[2025-10-12 08:03:06] 2025-10-12 12:01:53,443 | INFO     | chi2: 0.347158468361452
[2025-10-12 08:03:06] 2025-10-12 12:01:53,443 | INFO     | -- intersect: 4352670611.088037
[2025-10-12 08:03:06] 2025-10-12 12:01:53,443 | INFO     | current memory leak: -2.47 B/s (using 544 data points, chi2=0.35)
[2025-10-12 08:03:06] 2025-10-12 12:01:53,444 | INFO     | could have reported an average CPU frequency of 2776 MHz (23 samples)
[2025-10-12 08:03:06] 2025-10-12 12:01:53,444 | INFO     | ..............................
[2025-10-12 08:03:06] 2025-10-12 12:01:53,444 | INFO     | . Timing measurements:
[2025-10-12 08:03:06] 2025-10-12 12:01:53,444 | INFO     | . get job = 0 s
[2025-10-12 08:03:06] 2025-10-12 12:01:53,444 | INFO     | . initial setup = 8 s
[2025-10-12 08:03:06] 2025-10-12 12:01:53,444 | INFO     | . payload setup = 51 s
[2025-10-12 08:03:06] 2025-10-12 12:01:53,444 | INFO     | . stage-in = 0 s
[2025-10-12 08:03:06] 2025-10-12 12:01:53,444 | INFO     | . payload execution = 35991 s
[2025-10-12 08:03:06] 2025-10-12 12:01:53,445 | INFO     | . stage-out = 7 s
[2025-10-12 08:03:06] 2025-10-12 12:01:53,445 | INFO     | . log creation = 1 s
[2025-10-12 08:03:06] 2025-10-12 12:01:53,445 | INFO     | ..............................
[2025-10-12 08:03:06] 2025-10-12 12:01:53,985 | INFO     | time since job start (36183s) is within the limit (172800.0s)
[2025-10-12 08:03:06] 2025-10-12 12:01:53,988 | INFO     | 
[2025-10-12 08:03:06] 2025-10-12 12:01:53,989 | INFO     | job summary report
[2025-10-12 08:03:06] 2025-10-12 12:01:53,989 | INFO     | --------------------------------------------------
[2025-10-12 08:03:06] 2025-10-12 12:01:53,989 | INFO     | PanDA job id: 6838852949
[2025-10-12 08:03:06] 2025-10-12 12:01:53,989 | INFO     | task id: 46676269
[2025-10-12 08:03:06] 2025-10-12 12:01:53,989 | INFO     | errors: (none)
[2025-10-12 08:03:06] 2025-10-12 12:01:53,989 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:03:06] 2025-10-12 12:01:53,989 | INFO     | pilot state: finished 
[2025-10-12 08:03:06] 2025-10-12 12:01:53,989 | INFO     | transexitcode: 0
[2025-10-12 08:03:06] 2025-10-12 12:01:53,989 | INFO     | exeerrorcode: 0
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | exeerrordiag: 
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | exitcode: 0
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | exitmsg: OK
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | cpuconsumptiontime: 45142 s
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | nevents: 400
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | neventsw: 0
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | pid: 1040684
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | pgrp: 1040684
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | corecount: 8
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | event service: False
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | sizes: {0: 2348027, 1: 2348712, 2: 2348712, 3: 2348939, 14: 2348939, 25: 2348967, 36: 2349123, 40: 2349413, 48: 2349441, 36047: 2389828, 36048: 2389827, 36056: 239
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | --------------------------------------------------
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | 
[2025-10-12 08:03:06] 2025-10-12 12:01:53,990 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 08:03:06] 2025-10-12 12:01:54,201 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,201 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,201 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,201 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,202 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,203 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,203 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,203 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:03:06] 2025-10-12 12:01:54,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,203 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:03:06] 2025-10-12 12:01:54,204 | INFO     | job 6838852949 has completed (purged errors)
[2025-10-12 08:03:06] 2025-10-12 12:01:54,204 | INFO     | overall cleanup function is called
[2025-10-12 08:03:06] 2025-10-12 12:01:55,260 | INFO     | --- collectZombieJob: --- 10, [1040684]
[2025-10-12 08:03:06] 2025-10-12 12:01:55,260 | INFO     | zombie collector waiting for pid 1040684
[2025-10-12 08:03:06] 2025-10-12 12:01:55,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:03:06] 2025-10-12 12:01:55,260 | INFO     | collected zombie processes
[2025-10-12 08:03:06] 2025-10-12 12:01:55,260 | INFO     | will attempt to kill all subprocesses of pid=1040684
[2025-10-12 08:03:06] 2025-10-12 12:01:57,927 | INFO     | PID=1021283 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:03:06] 2025-10-12 12:01:57,928 | INFO     | .. there are 30 such processes running
[2025-10-12 08:03:06] 2025-10-12 12:01:57,940 | INFO     | process IDs to be killed: [1040684] (in reverse order)
[2025-10-12 08:03:06] 2025-10-12 12:01:58,182 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:03:06] 2025-10-12 12:01:58,183 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:03:06] 2025-10-12 12:01:58,278 | INFO     | did not find any defunct processes belonging to 1040684
[2025-10-12 08:03:06] 2025-10-12 12:01:58,351 | INFO     | did not find any defunct processes belonging to 1040684
[2025-10-12 08:03:06] 2025-10-12 12:01:58,352 | INFO     | ready for new job
[2025-10-12 08:03:06] 2025-10-12 12:01:58,352 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:03:06] 2025-10-12 12:01:58,377 | INFO     | ***************************************
[2025-10-12 08:03:06] 2025-10-12 12:01:58,377 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:03:06] 2025-10-12 12:01:58,377 | INFO     | ***************************************
[2025-10-12 08:03:06] 2025-10-12 12:01:58,377 | INFO     | 
[2025-10-12 08:03:06] 2025-10-12 12:01:58,402 | INFO     | architecture information:
[2025-10-12 08:03:06] 2025-10-12 12:01:58,415 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:03:06] 2025-10-12 12:01:58,561 | INFO     | cat /etc/os-release:
[2025-10-12 08:03:06] NAME="CentOS Linux"
[2025-10-12 08:03:06] VERSION="7 (Core)"
[2025-10-12 08:03:06] ID="centos"
[2025-10-12 08:03:06] ID_LIKE="rhel fedora"
[2025-10-12 08:03:06] VERSION_ID="7"
[2025-10-12 08:03:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:03:06] ANSI_COLOR="0;31"
[2025-10-12 08:03:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:03:06] HOME_URL="https://www.centos.org/"
[2025-10-12 08:03:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:03:06] 
[2025-10-12 08:03:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:03:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:03:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:03:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:03:06] 
[2025-10-12 08:03:06] 2025-10-12 12:01:58,561 | INFO     | ***************************************
[2025-10-12 08:03:06] 2025-10-12 12:01:59,065 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 08:03:06] 2025-10-12 12:01:59,138 | INFO     | sufficient remaining disk space (75672584192 B)
[2025-10-12 08:03:06] 2025-10-12 12:01:59,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:03:06] 2025-10-12 12:01:59,139 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:03:06] 2025-10-12 12:01:59,139 | INFO     | update_server=False
[2025-10-12 08:03:06] 2025-10-12 12:01:59,139 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:03:06] 2025-10-12 12:01:59,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:03:06] 2025-10-12 12:01:59,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:03:06] 2025-10-12 12:01:59,262 | INFO     | all payload control threads have been joined
[2025-10-12 08:03:06] 2025-10-12 12:01:59,372 | INFO     | all job control threads have been joined
[2025-10-12 08:03:06] 2025-10-12 12:01:59,456 | INFO     | all data control threads have been joined
[2025-10-12 08:03:06] 2025-10-12 12:01:59,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:03:06] 2025-10-12 12:01:59,888 | INFO     | aborting loop
[2025-10-12 08:03:06] 2025-10-12 12:02:00,145 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:00,154 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:00,271 | INFO     | [payload] control thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:00,379 | INFO     | [job] control thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:00,463 | INFO     | [data] control thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:00,563 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:00,595 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:00,595 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:00,872 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:00,894 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:00,898 | INFO     | [job] validate thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:00,900 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:01,164 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:01,215 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:01,239 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:02,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:03:06] 2025-10-12 12:02:06,640 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:03:06] 2025-10-12 12:02:31,291 | INFO     | PID=1021283 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:03:06] 2025-10-12 12:02:31,291 | INFO     | .. there are 30 such processes running
[2025-10-12 08:03:06] 2025-10-12 12:02:31,291 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:03:06] 2025-10-12 12:02:31,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:03:06] 2025-10-12 12:02:31,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:03:06] 2025-10-12 12:02:57,174 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:03:06] 2025-10-12 12:02:59,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325989496640)>', '<ExcThread(monitor, started 140325356033792)>']
[2025-10-12 08:03:06] 2025-10-12 12:02:59,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:03:06] 2025-10-12 12:02:59,471 | INFO     | [monitor] control thread has ended
[2025-10-12 08:03:06] 2025-10-12 12:03:04,264 | INFO     | all workflow threads have been joined
[2025-10-12 08:03:06] 2025-10-12 12:03:04,265 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:03:06] 2025-10-12 12:03:04,265 | INFO     | traces error code: 0
[2025-10-12 08:03:06] 2025-10-12 12:03:04,265 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:03:06] 2025-10-12 12:03:05,178 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:03:06] 2025-10-12 12:03:05,199 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:03:06] 2025-10-12 12:03:05,243 [wrapper] pilotpid: 1021283
[2025-10-12 08:03:06] 2025-10-12 12:03:05,254 [wrapper] Pilot exit status: 0
[2025-10-12 08:03:06] 2025-10-12 12:03:05,393 [wrapper] pandaids: 6838852949
[2025-10-12 08:03:06] 2025-10-12 12:03:05,648 [wrapper] cleanup supervisor_pilot 2982894 1021284
[2025-10-12 08:03:06] 2025-10-12 12:03:05,679 [wrapper] Test setup, not cleaning
[2025-10-12 08:03:06] 2025-10-12 12:03:05,736 [wrapper] apfmon messages muted
[2025-10-12 08:03:06] 2025-10-12 12:03:05,797 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:03:06] 2025-10-12 12:03:05,845 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:03:06]  *** Error codes and diagnostics ***
[2025-10-12 08:03:06]     "exeErrorCode": 0,
[2025-10-12 08:03:06]     "exeErrorDiag": "",
[2025-10-12 08:03:06]     "pilotErrorCode": 0,
[2025-10-12 08:03:06]     "pilotErrorDiag": "",
[2025-10-12 08:03:06]  *** Listing of results directory ***
[2025-10-12 08:03:06] total 420112
[2025-10-12 08:03:06] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 16:36 pilot3.tar.gz
[2025-10-12 08:03:06] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 16:43 queuedata.json
[2025-10-12 08:03:06] -rwx------. 1 boincer umatlas     36292 Oct 11 16:44 runpilot2-wrapper.sh
[2025-10-12 08:03:06] -rw-r--r--. 1 boincer umatlas       100 Oct 11 21:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:03:06] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 21:57 run_atlas
[2025-10-12 08:03:06] -rw-r--r--. 1 boincer umatlas       105 Oct 11 21:57 job.xml
[2025-10-12 08:03:06] -rw-r--r--. 2 boincer umatlas 222366918 Oct 11 21:57 EVNT.46676267._002597.pool.root.1
[2025-10-12 08:03:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:57 start_atlas.sh
[2025-10-12 08:03:06] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 21:57 shared
[2025-10-12 08:03:06] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 21:57 input.tar.gz
[2025-10-12 08:03:06] -rw-r--r--. 1 boincer umatlas         0 Oct 11 21:57 boinc_lockfile
[2025-10-12 08:03:06] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 21:57 pandaJob.out
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas    975496 Oct 11 21:58 agis_schedconf.cvmfs.json
[2025-10-12 08:03:06] drwx------. 5 boincer umatlas      4096 Oct 11 21:58 pilot3
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas 193603501 Oct 12 07:59 HITS.46676269._064585.pool.root.1
[2025-10-12 08:03:06] -rw-r--r--. 1 boincer umatlas       531 Oct 12 08:00 boinc_task_state.xml
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas      1050 Oct 12 08:00 memory_monitor_summary.json
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas   1560580 Oct 12 08:01 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas    727717 Oct 12 08:01 log.46676269._064585.job.log.tgz.1
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas        95 Oct 12 08:01 pilot_heartbeat.json
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas      7838 Oct 12 08:01 heartbeat.json
[2025-10-12 08:03:06] -rw-r--r--. 1 boincer umatlas      6844 Oct 12 08:02 init_data.xml
[2025-10-12 08:03:06] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 08:02 boinc_mmap_file
[2025-10-12 08:03:06] -rw-r--r--. 1 boincer umatlas        28 Oct 12 08:02 wrapper_checkpoint.txt
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas      4824 Oct 12 08:03 pilotlog.txt
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas   4435315 Oct 12 08:03 log.46676269._064585.job.log.1
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas       357 Oct 12 08:03 output.list
[2025-10-12 08:03:06] -rw-r--r--. 1 boincer umatlas       620 Oct 12 08:03 runtime_log
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas   5181440 Oct 12 08:03 result.tar.gz
[2025-10-12 08:03:06] -rw-r--r--. 1 boincer umatlas      8709 Oct 12 08:03 runtime_log.err
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas       659 Oct 12 08:03 IF0NDmSdvR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmkYSMDmYN4e9n.diag
[2025-10-12 08:03:06] -rw-r--r--. 1 boincer umatlas     21195 Oct 12 08:03 stderr.txt
[2025-10-12 08:03:06] HITS file was successfully produced:
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas 193603501 Oct 12 07:59 shared/HITS.pool.root.1
[2025-10-12 08:03:06]  *** Contents of shared directory: ***
[2025-10-12 08:03:06] total 411864
[2025-10-12 08:03:06] -rw-r--r--. 2 boincer umatlas 222366918 Oct 11 21:57 ATLAS.root_0
[2025-10-12 08:03:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:57 start_atlas.sh
[2025-10-12 08:03:06] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 21:57 input.tar.gz
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas 193603501 Oct 12 07:59 HITS.pool.root.1
[2025-10-12 08:03:06] -rw-------. 1 boincer umatlas   5181440 Oct 12 08:03 result.tar.gz
08:03:08 (1011501): run_atlas exited; CPU time 46478.139783
08:03:08 (1011501): called boinc_finish(0)

</stderr_txt>
]]>

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