Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:57:42 (4093133): wrapper (7.7.26015): starting
18:57:42 (4093133): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 18:57:42] Arguments: --nthreads 12
[2025-10-11 18:57:42] Threads: 12
[2025-10-11 18:57:42] Checking for CVMFS
[2025-10-11 18:57:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:57:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:57:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:57:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:57:44] 2.11.5.0 3542 30824 223624 151602 2 566 27866861 45568000 21004 130560 0 293417199 99.866 122224356 22464 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 18:57:44] CVMFS is ok
[2025-10-11 18:57:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:57:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:57:44] Further information can be found at the LHC@home message board.
[2025-10-11 18:57:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:57:44] Checking for apptainer binary...
[2025-10-11 18:57:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:57:44] Running /usr/bin/apptainer --version
[2025-10-11 18:57:44] apptainer version 1.4.1-1.el9
[2025-10-11 18:57:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:57:45] wns0088.triumf.lcg
[2025-10-11 18:57:45] apptainer works
[2025-10-11 18:57:45] Set ATHENA_PROC_NUMBER=12
[2025-10-11 18:57:45] Set ATHENA_CORE_NUMBER=12
[2025-10-11 18:57:45] Starting ATLAS job with PandaID=6839162666
[2025-10-11 18:57:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:03:23]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:03:23] 2025-10-12 02:02:27,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | WARNING  | wrong length of table data, x=[1760234378.0], y=[1048.0] (must be same and length>=4)
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | could have reported an average CPU frequency of 2614 MHz (4 samples)
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | ..............................
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . Timing measurements:
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . get job = 0 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . initial setup = 4 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . payload setup = 18 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . stage-in = 0 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . payload execution = 52 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . stage-out = 0 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . log creation = 0 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | ..............................
[2025-10-11 19:03:23] 2025-10-12 02:02:27,010 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 19:03:23] 2025-10-12 02:02:27,010 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162666/pilotlog.txt
[2025-10-11 19:03:23] 2025-10-12 02:02:27,026 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 19:03:23] - Log from pilotlog.txt -
[2025-10-11 19:03:23] 2025-10-12 02:02:27,007 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839162666/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 19:03:23] 2025-10-12 02:02:27,008 | INFO     | extracted standard info from prmon json
[2025-10-11 19:03:23] 2025-10-12 02:02:27,008 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:03:23] 2025-10-12 02:02:27,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:03:23] 2025-10-12 02:02:27,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:03:23] 2025-10-12 02:02:27,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | WARNING  | wrong length of table data, x=[1760234378.0], y=[1048.0] (must be same and length>=4)
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | could have reported an average CPU frequency of 2614 MHz (4 samples)
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | ..............................
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . Timing measurements:
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . get job = 0 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . initial setup = 4 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . payload setup = 18 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . stage-in = 0 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . payload execution = 52 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . stage-out = 0 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . log creation = 0 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | ..............................
[2025-10-11 19:03:23] 2025-10-12 02:02:27,010 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 19:03:23] 2025-10-12 02:02:27,010 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162666/pilotlog.txt
[2025-10-11 19:03:23] 2025-10-12 02:02:27,026 | WARNING  | 
[2025-10-11 19:03:23] [begin log extracts]
[2025-10-11 19:03:23] - Log from pilotlog.txt -
[2025-10-11 19:03:23] 2025-10-12 02:02:27,007 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839162666/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 19:03:23] 2025-10-12 02:02:27,008 | INFO     | extracted standard info from prmon json
[2025-10-11 19:03:23] 2025-10-12 02:02:27,008 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:03:23] 2025-10-12 02:02:27,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:03:23] 2025-10-12 02:02:27,008 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:03:23] 2025-10-12 02:02:27,008 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | WARNING  | wrong length of table data, x=[1760234378.0], y=[1048.0] (must be same and length>=4)
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | could have reported an average CPU frequency of 2614 MHz (4 samples)
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | ..............................
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . Timing measurements:
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . get job = 0 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . initial setup = 4 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . payload setup = 18 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . stage-in = 0 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . payload execution = 52 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . stage-out = 0 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | . log creation = 0 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,009 | INFO     | ..............................
[2025-10-11 19:03:23] 2025-10-12 02:02:27,010 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 19:03:23] 2025-10-12 02:02:27,010 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162666/pilotlog.txt
[2025-10-11 19:03:23] [end log extracts]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,027 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 19:03:23] 2025-10-12 02:02:27,027 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 19:03:23] 2025-10-12 02:02:27,147 | INFO     | 
[2025-10-11 19:03:23] 2025-10-12 02:02:27,147 | INFO     | job summary report
[2025-10-11 19:03:23] 2025-10-12 02:02:27,147 | INFO     | --------------------------------------------------
[2025-10-11 19:03:23] 2025-10-12 02:02:27,147 | INFO     | PanDA job id: 6839162666
[2025-10-11 19:03:23] 2025-10-12 02:02:27,147 | INFO     | task id: 46676269
[2025-10-11 19:03:23] 2025-10-12 02:02:27,147 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 19:00:04,295 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | pilot state: failed 
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | transexitcode: 65
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | exeerrorcode: 65
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | exitcode: 65
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | cpuconsumptiontime: 17 s
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | nevents: 0
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | neventsw: 0
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | pid: 4110833
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | pgrp: 4110833
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | corecount: 12
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | event service: False
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | sizes: {0: 2348632, 1: 2348831, 2: 2348831, 12: 2348859, 15: 2349149, 23: 2349177, 74: 2372711, 75: 2377003, 78: 2377031, 209: 2377225}
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | --------------------------------------------------
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | 
[2025-10-11 19:03:23] 2025-10-12 02:02:27,148 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 19:03:23] 2025-10-12 02:02:27,175 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,175 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,175 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,175 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,175 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | job 6839162666 has completed (purged errors)
[2025-10-11 19:03:23] 2025-10-12 02:02:27,176 | INFO     | overall cleanup function is called
[2025-10-11 19:03:23] 2025-10-12 02:02:28,187 | INFO     | --- collectZombieJob: --- 10, [4110833]
[2025-10-11 19:03:23] 2025-10-12 02:02:28,187 | INFO     | zombie collector waiting for pid 4110833
[2025-10-11 19:03:23] 2025-10-12 02:02:28,187 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:03:23] 2025-10-12 02:02:28,187 | INFO     | collected zombie processes
[2025-10-11 19:03:23] 2025-10-12 02:02:28,187 | INFO     | will attempt to kill all subprocesses of pid=4110833
[2025-10-11 19:03:23] 2025-10-12 02:02:28,504 | INFO     | process IDs to be killed: [4110833] (in reverse order)
[2025-10-11 19:03:23] 2025-10-12 02:02:28,641 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:03:23] 2025-10-12 02:02:28,641 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:03:23] 2025-10-12 02:02:28,693 | INFO     | did not find any defunct processes belonging to 4110833
[2025-10-11 19:03:23] 2025-10-12 02:02:28,705 | INFO     | did not find any defunct processes belonging to 4110833
[2025-10-11 19:03:23] 2025-10-12 02:02:28,706 | INFO     | ready for new job
[2025-10-11 19:03:23] 2025-10-12 02:02:28,706 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:03:23] 2025-10-12 02:02:28,707 | INFO     | ***************************************
[2025-10-11 19:03:23] 2025-10-12 02:02:28,707 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:03:23] 2025-10-12 02:02:28,707 | INFO     | ***************************************
[2025-10-11 19:03:23] 2025-10-12 02:02:28,707 | INFO     | 
[2025-10-11 19:03:23] 2025-10-12 02:02:28,710 | INFO     | architecture information:
[2025-10-11 19:03:23] 2025-10-12 02:02:28,710 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:03:23] 2025-10-12 02:02:28,725 | INFO     | cat /etc/os-release:
[2025-10-11 19:03:23] NAME="CentOS Linux"
[2025-10-11 19:03:23] VERSION="7 (Core)"
[2025-10-11 19:03:23] ID="centos"
[2025-10-11 19:03:23] ID_LIKE="rhel fedora"
[2025-10-11 19:03:23] VERSION_ID="7"
[2025-10-11 19:03:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:03:23] ANSI_COLOR="0;31"
[2025-10-11 19:03:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:03:23] HOME_URL="https://www.centos.org/"
[2025-10-11 19:03:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:03:23] 
[2025-10-11 19:03:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:03:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:03:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:03:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:03:23] 
[2025-10-11 19:03:23] 2025-10-12 02:02:28,725 | INFO     | ***************************************
[2025-10-11 19:03:23] 2025-10-12 02:02:29,228 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 19:03:23] 2025-10-12 02:02:29,286 | INFO     | sufficient remaining disk space (1796412014592 B)
[2025-10-11 19:03:23] 2025-10-12 02:02:29,286 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:03:23] 2025-10-12 02:02:29,287 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:03:23] 2025-10-12 02:02:29,287 | INFO     | update_server=False
[2025-10-11 19:03:23] 2025-10-12 02:02:29,287 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:03:23] 2025-10-12 02:02:29,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:03:23] 2025-10-12 02:02:29,338 | INFO     | all payload control threads have been joined
[2025-10-11 19:03:23] 2025-10-12 02:02:29,466 | INFO     | all data control threads have been joined
[2025-10-11 19:03:23] 2025-10-12 02:02:29,747 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 19:03:23] 2025-10-12 02:02:29,747 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 19:03:23] 2025-10-12 02:02:29,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:03:23] 2025-10-12 02:02:29,747 | INFO     | will abort loop
[2025-10-11 19:03:23] 2025-10-12 02:02:30,061 | INFO     | all job control threads have been joined
[2025-10-11 19:03:23] 2025-10-12 02:02:30,299 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:30,343 | INFO     | [payload] control thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:30,472 | INFO     | [data] control thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:30,492 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:30,754 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:31,067 | INFO     | [job] control thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:31,137 | INFO     | [job] validate thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:31,137 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:31,250 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:31,345 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:31,427 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:31,456 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:31,724 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:31,772 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:32,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:03:23] 2025-10-12 02:02:32,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:03:23] 2025-10-12 02:02:33,178 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:36,650 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:03:23] 2025-10-12 02:02:59,031 | INFO     | PID=4099901 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 19:03:23] 2025-10-12 02:02:59,031 | INFO     | .. there are 42 such processes running
[2025-10-11 19:03:23] 2025-10-12 02:02:59,031 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:03:23] 2025-10-12 02:02:59,031 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:03:23] 2025-10-12 02:02:59,031 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:03:23] 2025-10-12 02:03:15,902 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:03:23] 2025-10-12 02:03:16,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140161745680192)>', '<ExcThread(monitor, started 140161207752448)>']
[2025-10-11 19:03:23] 2025-10-12 02:03:17,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:03:23] 2025-10-12 02:03:17,152 | INFO     | [monitor] control thread has ended
[2025-10-11 19:03:23] 2025-10-12 02:03:21,562 | INFO     | all workflow threads have been joined
[2025-10-11 19:03:23] 2025-10-12 02:03:21,562 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:03:23] 2025-10-12 02:03:21,562 | INFO     | traces error code: 0
[2025-10-11 19:03:23] 2025-10-12 02:03:21,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:03:23] 2025-10-12 02:03:22,267 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:03:23] 2025-10-12 02:03:22,274 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:03:23] 2025-10-12 02:03:22,279 [wrapper] pilotpid: 4099901
[2025-10-11 19:03:23] 2025-10-12 02:03:22,284 [wrapper] Pilot exit status: 0
[2025-10-11 19:03:23] 2025-10-12 02:03:22,555 [wrapper] pandaids: 6839162666
[2025-10-11 19:03:23] 2025-10-12 02:03:22,792 [wrapper] cleanup supervisor_pilot 4099913 4099902
[2025-10-11 19:03:23] 2025-10-12 02:03:22,825 [wrapper] Test setup, not cleaning
[2025-10-11 19:03:23] 2025-10-12 02:03:22,841 [wrapper] apfmon messages muted
[2025-10-11 19:03:23] 2025-10-12 02:03:22,877 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:03:23] 2025-10-12 02:03:22,911 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:03:23]  *** Error codes and diagnostics ***
[2025-10-11 19:03:23]     "exeErrorCode": 65,
[2025-10-11 19:03:23]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 19:03:23]     "pilotErrorCode": 1305,
[2025-10-11 19:03:23]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 19:03:23]  *** Listing of results directory ***
[2025-10-11 19:03:23] total 220720
[2025-10-11 19:03:23] -rw-r--r--. 1 boinc boinc    557409 Oct 11 16:21 pilot3.tar.gz
[2025-10-11 19:03:23] -rwx------. 1 boinc boinc     36292 Oct 11 16:31 runpilot2-wrapper.sh
[2025-10-11 19:03:23] -rw-r--r--. 1 boinc boinc      5112 Oct 11 16:31 queuedata.json
[2025-10-11 19:03:23] -rw-r--r--. 1 boinc boinc       100 Oct 11 18:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:03:23] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 18:57 run_atlas
[2025-10-11 19:03:23] -rw-r--r--. 1 boinc boinc       105 Oct 11 18:57 job.xml
[2025-10-11 19:03:23] -rw-r--r--. 1 boinc boinc      6594 Oct 11 18:57 init_data.xml
[2025-10-11 19:03:23] -rw-r--r--. 2 boinc boinc 221904171 Oct 11 18:57 EVNT.46676267._002717.pool.root.1
[2025-10-11 19:03:23] -rw-r--r--. 2 boinc boinc     15120 Oct 11 18:57 start_atlas.sh
[2025-10-11 19:03:23] drwxrwx--x. 2 boinc boinc      4096 Oct 11 18:57 shared
[2025-10-11 19:03:23] -rw-r--r--. 2 boinc boinc    569676 Oct 11 18:57 input.tar.gz
[2025-10-11 19:03:23] -rw-r--r--. 1 boinc boinc         0 Oct 11 18:57 boinc_lockfile
[2025-10-11 19:03:23] -rw-r--r--. 1 boinc boinc      2549 Oct 11 18:57 pandaJob.out
[2025-10-11 19:03:23] -rw-------. 1 boinc boinc    975496 Oct 11 18:58 agis_schedconf.cvmfs.json
[2025-10-11 19:03:23] -rw-------. 1 boinc boinc   1560580 Oct 11 18:58 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:03:23] drwx------. 5 boinc boinc      4096 Oct 11 18:58 pilot3
[2025-10-11 19:03:23] -rw-------. 1 boinc boinc       954 Oct 11 19:00 memory_monitor_summary.json
[2025-10-11 19:03:23] -rw-------. 1 boinc boinc     22111 Oct 11 19:00 log.46676269._067089.job.log.tgz.1
[2025-10-11 19:03:23] -rw-------. 1 boinc boinc        95 Oct 11 19:02 pilot_heartbeat.json
[2025-10-11 19:03:23] -rw-------. 1 boinc boinc      8412 Oct 11 19:02 heartbeat.json
[2025-10-11 19:03:23] -rw-r--r--. 1 boinc boinc       524 Oct 11 19:03 boinc_task_state.xml
[2025-10-11 19:03:23] -rw-------. 1 boinc boinc      5009 Oct 11 19:03 pilotlog.txt
[2025-10-11 19:03:23] -rw-r--r--. 1 boinc boinc      8192 Oct 11 19:03 boinc_mmap_file
[2025-10-11 19:03:23] -rw-------. 1 boinc boinc     93386 Oct 11 19:03 log.46676269._067089.job.log.1
[2025-10-11 19:03:23] -rw-------. 1 boinc boinc       188 Oct 11 19:03 output.list
[2025-10-11 19:03:23] -rw-r--r--. 1 boinc boinc       620 Oct 11 19:03 runtime_log
[2025-10-11 19:03:23] -rw-------. 1 boinc boinc    133120 Oct 11 19:03 result.tar.gz
[2025-10-11 19:03:23] -rw-------. 1 boinc boinc       644 Oct 11 19:03 Yb8NDmPEyR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmrnSMDmL7Jdpn.diag
[2025-10-11 19:03:23] -rw-r--r--. 1 boinc boinc      8528 Oct 11 19:03 runtime_log.err
[2025-10-11 19:03:23] -rw-r--r--. 1 boinc boinc        22 Oct 11 19:03 wrapper_checkpoint.txt
[2025-10-11 19:03:23] -rw-r--r--. 1 boinc boinc      2140 Oct 11 19:03 stderr.txt
[2025-10-11 19:03:23] No HITS result produced
[2025-10-11 19:03:23]  *** Contents of shared directory: ***
[2025-10-11 19:03:23] total 217416
[2025-10-11 19:03:23] -rw-r--r--. 2 boinc boinc 221904171 Oct 11 18:57 ATLAS.root_0
[2025-10-11 19:03:23] -rw-r--r--. 2 boinc boinc     15120 Oct 11 18:57 start_atlas.sh
[2025-10-11 19:03:23] -rw-r--r--. 2 boinc boinc    569676 Oct 11 18:57 input.tar.gz
[2025-10-11 19:03:23] -rw-------. 1 boinc boinc    133120 Oct 11 19:03 result.tar.gz
19:03:25 (4093133): run_atlas exited; CPU time 28.232634
19:03:25 (4093133): called boinc_finish(0)

</stderr_txt>
]]>

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