Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:54:01 (20094): wrapper (7.7.26015): starting
21:54:01 (20094): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 21:54:01] Arguments: --nthreads 4
[2025-10-11 21:54:01] Threads: 4
[2025-10-11 21:54:01] Checking for CVMFS
[2025-10-11 21:54:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:54:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:54:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:54:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:54:01] 2.11.2.0 2311 42009 67652 151602 3 56 19677585 20275200 1 130560 0 21920202 99.989 1358154 55819 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 21:54:01] CVMFS is ok
[2025-10-11 21:54:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:54:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:54:01] Further information can be found at the LHC@home message board.
[2025-10-11 21:54:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:54:01] Checking for apptainer binary...
[2025-10-11 21:54:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:54:01] Running /usr/bin/apptainer --version
[2025-10-11 21:54:01] apptainer version 1.3.2-1.el7
[2025-10-11 21:54:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:54:01] c-205-34.aglt2.org
[2025-10-11 21:54:01] apptainer works
[2025-10-11 21:54:02] Set ATHENA_PROC_NUMBER=4
[2025-10-11 21:54:02] Set ATHENA_CORE_NUMBER=4
[2025-10-11 21:54:02] Starting ATLAS job with PandaID=6838852626
[2025-10-11 21:54:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:25:49]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:25:49]  scope=mc23_13p6TeV
[2025-10-11 23:25:49]  status=None
[2025-10-11 23:25:49]  status_code=0
[2025-10-11 23:25:49]  storage_token=
[2025-10-11 23:25:49]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838852626/log.46676269._064408.job.log.tgz.1
[2025-10-11 23:25:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/c1/log.46676269._064408.job.log.tgz.1
[2025-10-11 23:25:49]  workdir=None
[2025-10-11 23:25:49] ]
[2025-10-11 23:25:49] 2025-10-12 03:25:08,940 | INFO     | transferring file log.46676269._064408.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838852626/log.46676269._064408.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 23:25:49] 2025-10-12 03:25:08,940 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838852626/log.46676269._064408.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._064408.job
[2025-10-11 23:25:49] 2025-10-12 03:25:08,949 | INFO     | adding to output.list: log.46676269._064408.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/98/c1/log.46676269._064408.job.log.tg
[2025-10-11 23:25:49] 2025-10-12 03:25:08,950 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 23:25:49] 2025-10-12 03:25:08,950 | INFO     | summary of transferred files:
[2025-10-11 23:25:49] 2025-10-12 03:25:08,950 | INFO     |  -- lfn=log.46676269._064408.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 23:25:49] 2025-10-12 03:25:08,950 | INFO     | stage-out finished correctly
[2025-10-11 23:25:49] 2025-10-12 03:25:10,310 | INFO     | time since job start (5459s) is within the limit (172800.0s)
[2025-10-11 23:25:49] 2025-10-12 03:25:11,665 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 23:25:49] 2025-10-12 03:25:12,102 | WARNING  | process 30148 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 23:25:49] 2025-10-12 03:25:12,102 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838852626/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:25:49] 2025-10-12 03:25:12,130 | INFO     | number of running child processes to parent process 30148: 1
[2025-10-11 23:25:49] 2025-10-12 03:25:12,130 | INFO     | maximum number of monitored processes: 6
[2025-10-11 23:25:49] 2025-10-12 03:25:12,315 | INFO     | time since job start (5461s) is within the limit (172800.0s)
[2025-10-11 23:25:49] 2025-10-12 03:25:14,118 | INFO     | job 6838852626 has state=finished
[2025-10-11 23:25:49] 2025-10-12 03:25:14,119 | INFO     | preparing for final server update for job 6838852626 in state='finished'
[2025-10-11 23:25:49] 2025-10-12 03:25:14,119 | INFO     | this job has now completed (state=finished)
[2025-10-11 23:25:49] 2025-10-12 03:25:14,119 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 23:25:49] 2025-10-12 03:25:14,119 | INFO     | log transfer has been attempted: DONE
[2025-10-11 23:25:49] 2025-10-12 03:25:14,120 | INFO     | job 6838852626 has finished - writing final server update
[2025-10-11 23:25:49] 2025-10-12 03:25:14,120 | INFO     | total number of processed events: 400 (read)
[2025-10-11 23:25:49] 2025-10-12 03:25:14,121 | INFO     | executing command: lscpu
[2025-10-11 23:25:49] 2025-10-12 03:25:14,144 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 23:25:49] 2025-10-12 03:25:14,321 | INFO     | time since job start (5463s) is within the limit (172800.0s)
[2025-10-11 23:25:49] 2025-10-12 03:25:14,633 | INFO     | monitor loop #414: job 0:6838852626 is in state 'finished'
[2025-10-11 23:25:49] 2025-10-12 03:25:14,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:25:49] 2025-10-12 03:25:16,326 | INFO     | time since job start (5465s) is within the limit (172800.0s)
[2025-10-11 23:25:49] 2025-10-12 03:25:17,136 | INFO     | monitor loop #415: job 0:6838852626 is in state 'finished'
[2025-10-11 23:25:49] 2025-10-12 03:25:17,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:25:49] 2025-10-12 03:25:17,193 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 23:25:49] 2025-10-12 03:25:17,194 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 1985.41225
[2025-10-11 23:25:49] 2025-10-12 03:25:17,195 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838852626/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:25:49] 2025-10-12 03:25:17,195 | INFO     | extracted standard info from prmon json
[2025-10-11 23:25:49] 2025-10-12 03:25:17,195 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:25:49] 2025-10-12 03:25:17,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:25:49] 2025-10-12 03:25:17,195 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:25:49] 2025-10-12 03:25:17,195 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:25:49] 2025-10-12 03:25:17,197 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:25:49] 2025-10-12 03:25:17,197 | INFO     | sum of square deviations: 177275882.0
[2025-10-11 23:25:49] 2025-10-12 03:25:17,197 | INFO     | sum of deviations: -3521461436.0000005
[2025-10-11 23:25:49] 2025-10-12 03:25:17,197 | INFO     | mean x: 1760236879.0
[2025-10-11 23:25:49] 2025-10-12 03:25:17,197 | INFO     | mean y: 2365622.7590361447
[2025-10-11 23:25:49] 2025-10-12 03:25:17,197 | INFO     | -- intersect: 34968240380.745
[2025-10-11 23:25:49] 2025-10-12 03:25:17,197 | INFO     | intersect: 34968240380.745
[2025-10-11 23:25:49] 2025-10-12 03:25:17,197 | INFO     | chi2: 0.06987177442452237
[2025-10-11 23:25:49] 2025-10-12 03:25:17,197 | INFO     | -- intersect: 34968240380.745
[2025-10-11 23:25:49] 2025-10-12 03:25:17,197 | INFO     | current memory leak: -19.86 B/s (using 83 data points, chi2=0.07)
[2025-10-11 23:25:49] 2025-10-12 03:25:17,198 | INFO     | could have reported an average CPU frequency of 2777 MHz (6 samples)
[2025-10-11 23:25:49] 2025-10-12 03:25:17,198 | INFO     | ..............................
[2025-10-11 23:25:49] 2025-10-12 03:25:17,198 | INFO     | . Timing measurements:
[2025-10-11 23:25:49] 2025-10-12 03:25:17,198 | INFO     | . get job = 0 s
[2025-10-11 23:25:49] 2025-10-12 03:25:17,198 | INFO     | . initial setup = 2 s
[2025-10-11 23:25:49] 2025-10-12 03:25:17,198 | INFO     | . payload setup = 3 s
[2025-10-11 23:25:49] 2025-10-12 03:25:17,198 | INFO     | . stage-in = 0 s
[2025-10-11 23:25:49] 2025-10-12 03:25:17,198 | INFO     | . payload execution = 5435 s
[2025-10-11 23:25:49] 2025-10-12 03:25:17,198 | INFO     | . stage-out = 0 s
[2025-10-11 23:25:49] 2025-10-12 03:25:17,198 | INFO     | . log creation = 0 s
[2025-10-11 23:25:49] 2025-10-12 03:25:17,198 | INFO     | ..............................
[2025-10-11 23:25:49] 2025-10-12 03:25:17,237 | INFO     | 
[2025-10-11 23:25:49] 2025-10-12 03:25:17,237 | INFO     | job summary report
[2025-10-11 23:25:49] 2025-10-12 03:25:17,237 | INFO     | --------------------------------------------------
[2025-10-11 23:25:49] 2025-10-12 03:25:17,237 | INFO     | PanDA job id: 6838852626
[2025-10-11 23:25:49] 2025-10-12 03:25:17,237 | INFO     | task id: 46676269
[2025-10-11 23:25:49] 2025-10-12 03:25:17,237 | INFO     | errors: (none)
[2025-10-11 23:25:49] 2025-10-12 03:25:17,237 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:25:49] 2025-10-12 03:25:17,237 | INFO     | pilot state: finished 
[2025-10-11 23:25:49] 2025-10-12 03:25:17,237 | INFO     | transexitcode: 0
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | exeerrorcode: 0
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | exeerrordiag: 
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | exitcode: 0
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | exitmsg: OK
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | cpuconsumptiontime: 20990 s
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | nevents: 400
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | neventsw: 0
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | pid: 30148
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | pgrp: 30148
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | corecount: 4
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | event service: False
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | sizes: {0: 2348680, 1: 2348879, 4: 2349141, 11: 2349169, 5442: 2375837, 5443: 2375836, 5444: 2385018, 5447: 2385074, 5453: 2385268}
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | --------------------------------------------------
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | 
[2025-10-11 23:25:49] 2025-10-12 03:25:17,238 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 23:25:49] 2025-10-12 03:25:17,249 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,249 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,249 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,249 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,249 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | job 6838852626 has completed (purged errors)
[2025-10-11 23:25:49] 2025-10-12 03:25:17,250 | INFO     | overall cleanup function is called
[2025-10-11 23:25:49] 2025-10-12 03:25:18,257 | INFO     | --- collectZombieJob: --- 10, [30148]
[2025-10-11 23:25:49] 2025-10-12 03:25:18,257 | INFO     | zombie collector waiting for pid 30148
[2025-10-11 23:25:49] 2025-10-12 03:25:18,257 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:25:49] 2025-10-12 03:25:18,257 | INFO     | collected zombie processes
[2025-10-11 23:25:49] 2025-10-12 03:25:18,257 | INFO     | will attempt to kill all subprocesses of pid=30148
[2025-10-11 23:25:49] 2025-10-12 03:25:18,288 | INFO     | process IDs to be killed: [30148] (in reverse order)
[2025-10-11 23:25:49] 2025-10-12 03:25:18,310 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:25:49] 2025-10-12 03:25:18,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:25:49] 2025-10-12 03:25:18,311 | INFO     | did not find any defunct processes belonging to 30148
[2025-10-11 23:25:49] 2025-10-12 03:25:18,312 | INFO     | did not find any defunct processes belonging to 30148
[2025-10-11 23:25:49] 2025-10-12 03:25:18,312 | INFO     | ready for new job
[2025-10-11 23:25:49] 2025-10-12 03:25:18,312 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:25:49] 2025-10-12 03:25:18,313 | INFO     | ***************************************
[2025-10-11 23:25:49] 2025-10-12 03:25:18,313 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:25:49] 2025-10-12 03:25:18,313 | INFO     | ***************************************
[2025-10-11 23:25:49] 2025-10-12 03:25:18,313 | INFO     | 
[2025-10-11 23:25:49] 2025-10-12 03:25:18,313 | INFO     | architecture information:
[2025-10-11 23:25:49] 2025-10-12 03:25:18,313 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:25:49] 2025-10-12 03:25:18,322 | INFO     | cat /etc/os-release:
[2025-10-11 23:25:49] NAME="CentOS Linux"
[2025-10-11 23:25:49] VERSION="7 (Core)"
[2025-10-11 23:25:49] ID="centos"
[2025-10-11 23:25:49] ID_LIKE="rhel fedora"
[2025-10-11 23:25:49] VERSION_ID="7"
[2025-10-11 23:25:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:25:49] ANSI_COLOR="0;31"
[2025-10-11 23:25:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:25:49] HOME_URL="https://www.centos.org/"
[2025-10-11 23:25:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:25:49] 
[2025-10-11 23:25:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:25:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:25:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:25:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:25:49] 
[2025-10-11 23:25:49] 2025-10-12 03:25:18,322 | INFO     | ***************************************
[2025-10-11 23:25:49] 2025-10-12 03:25:18,825 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 23:25:49] 2025-10-12 03:25:18,927 | INFO     | sufficient remaining disk space (29363273728 B)
[2025-10-11 23:25:49] 2025-10-12 03:25:18,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:25:49] 2025-10-12 03:25:18,928 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:25:49] 2025-10-12 03:25:18,928 | INFO     | update_server=False
[2025-10-11 23:25:49] 2025-10-12 03:25:18,928 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:25:49] 2025-10-12 03:25:18,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:25:49] 2025-10-12 03:25:18,929 | INFO     | aborting loop
[2025-10-11 23:25:49] 2025-10-12 03:25:18,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:25:49] 2025-10-12 03:25:19,381 | INFO     | all data control threads have been joined
[2025-10-11 23:25:49] 2025-10-12 03:25:19,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:25:49] 2025-10-12 03:25:19,532 | INFO     | all job control threads have been joined
[2025-10-11 23:25:49] 2025-10-12 03:25:19,679 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:25:49] 2025-10-12 03:25:19,932 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:19,934 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:19,935 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:20,085 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:20,139 | INFO     | all payload control threads have been joined
[2025-10-11 23:25:49] 2025-10-12 03:25:20,142 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:20,382 | INFO     | [data] control thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:20,538 | INFO     | [job] control thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:20,651 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:20,850 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:21,144 | INFO     | [payload] control thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:21,187 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:21,217 | INFO     | [job] validate thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:21,331 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:21,404 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:21,504 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:22,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:25:49] 2025-10-12 03:25:26,276 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:25:49] 2025-10-12 03:25:27,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002255251264)>', '<ExcThread(monitor, started 140001790629632)>']
[2025-10-11 23:25:49] 2025-10-12 03:25:33,015 | INFO     | all workflow threads have been joined
[2025-10-11 23:25:49] 2025-10-12 03:25:33,015 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:25:49] 2025-10-12 03:25:33,030 | INFO     | traces error code: 0
[2025-10-11 23:25:49] 2025-10-12 03:25:33,030 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:25:49] 2025-10-12 03:25:49,441 | INFO     | PID=23802 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 23:25:49] 2025-10-12 03:25:49,442 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:25:49] 2025-10-12 03:25:49,442 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:25:49] 2025-10-12 03:25:49,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:25:49] 2025-10-12 03:25:49,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:25:49] 2025-10-12 03:25:49,442 | INFO     | [monitor] control thread has ended
[2025-10-11 23:25:49] 2025-10-12 03:25:49,497 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:25:49] 2025-10-12 03:25:49,499 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:25:49] 2025-10-12 03:25:49,501 [wrapper] pilotpid: 23802
[2025-10-11 23:25:49] 2025-10-12 03:25:49,503 [wrapper] Pilot exit status: 0
[2025-10-11 23:25:49] 2025-10-12 03:25:49,509 [wrapper] pandaids: 6838852626
[2025-10-11 23:25:49] 2025-10-12 03:25:49,524 [wrapper] cleanup supervisor_pilot 30802 23803
[2025-10-11 23:25:49] 2025-10-12 03:25:49,526 [wrapper] Test setup, not cleaning
[2025-10-11 23:25:49] 2025-10-12 03:25:49,528 [wrapper] apfmon messages muted
[2025-10-11 23:25:49] 2025-10-12 03:25:49,530 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:25:49] 2025-10-12 03:25:49,532 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:25:49]  *** Error codes and diagnostics ***
[2025-10-11 23:25:49]     "exeErrorCode": 0,
[2025-10-11 23:25:49]     "exeErrorDiag": "",
[2025-10-11 23:25:49]     "pilotErrorCode": 0,
[2025-10-11 23:25:49]     "pilotErrorDiag": "",
[2025-10-11 23:25:49]  *** Listing of results directory ***
[2025-10-11 23:25:49] total 411140
[2025-10-11 23:25:49] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 16:21 pilot3.tar.gz
[2025-10-11 23:25:49] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 16:34 queuedata.json
[2025-10-11 23:25:49] -rwx------ 1 boincer umatlas     36292 Oct 11 16:34 runpilot2-wrapper.sh
[2025-10-11 23:25:49] -rw-r--r-- 1 boincer umatlas       100 Oct 11 21:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:25:49] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 21:54 run_atlas
[2025-10-11 23:25:49] -rw-r--r-- 1 boincer umatlas       105 Oct 11 21:54 job.xml
[2025-10-11 23:25:49] -rw-r--r-- 2 boincer umatlas 220121035 Oct 11 21:54 EVNT.46676267._002589.pool.root.1
[2025-10-11 23:25:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 21:54 start_atlas.sh
[2025-10-11 23:25:49] drwxrwx--x 2 boincer umatlas      4096 Oct 11 21:54 shared
[2025-10-11 23:25:49] -rw-r--r-- 2 boincer umatlas    569677 Oct 11 21:54 input.tar.gz
[2025-10-11 23:25:49] -rw-r--r-- 1 boincer umatlas         0 Oct 11 21:54 boinc_lockfile
[2025-10-11 23:25:49] -rw-r--r-- 1 boincer umatlas      2547 Oct 11 21:54 pandaJob.out
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas    975496 Oct 11 21:54 agis_schedconf.cvmfs.json
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas   1560580 Oct 11 21:54 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:25:49] drwx------ 5 boincer umatlas      4096 Oct 11 21:54 pilot3
[2025-10-11 23:25:49] -rw-r--r-- 1 boincer umatlas      6237 Oct 11 23:21 init_data.xml
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas 194881757 Oct 11 23:24 HITS.46676269._064408.pool.root.1
[2025-10-11 23:25:49] -rw-r--r-- 1 boincer umatlas       529 Oct 11 23:24 boinc_task_state.xml
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas        95 Oct 11 23:24 pilot_heartbeat.json
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas      1041 Oct 11 23:25 memory_monitor_summary.json
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas    261659 Oct 11 23:25 log.46676269._064408.job.log.tgz.1
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas      7824 Oct 11 23:25 heartbeat.json
[2025-10-11 23:25:49] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 23:25 boinc_mmap_file
[2025-10-11 23:25:49] -rw-r--r-- 1 boincer umatlas        27 Oct 11 23:25 wrapper_checkpoint.txt
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas       745 Oct 11 23:25 pilotlog.txt
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas    789751 Oct 11 23:25 log.46676269._064408.job.log.1
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas       357 Oct 11 23:25 output.list
[2025-10-11 23:25:49] -rw-r--r-- 1 boincer umatlas       620 Oct 11 23:25 runtime_log
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas   1075200 Oct 11 23:25 result.tar.gz
[2025-10-11 23:25:49] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 23:25 runtime_log.err
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas       656 Oct 11 23:25 nG0LDmpTvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVXhNDmDjOpun.diag
[2025-10-11 23:25:49] -rw-r--r-- 1 boincer umatlas     21951 Oct 11 23:25 stderr.txt
[2025-10-11 23:25:49] HITS file was successfully produced:
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas 194881757 Oct 11 23:24 shared/HITS.pool.root.1
[2025-10-11 23:25:49]  *** Contents of shared directory: ***
[2025-10-11 23:25:49] total 406912
[2025-10-11 23:25:49] -rw-r--r-- 2 boincer umatlas 220121035 Oct 11 21:54 ATLAS.root_0
[2025-10-11 23:25:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 21:54 start_atlas.sh
[2025-10-11 23:25:49] -rw-r--r-- 2 boincer umatlas    569677 Oct 11 21:54 input.tar.gz
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas 194881757 Oct 11 23:24 HITS.pool.root.1
[2025-10-11 23:25:49] -rw------- 1 boincer umatlas   1075200 Oct 11 23:25 result.tar.gz
23:25:51 (20094): run_atlas exited; CPU time 21003.934084
23:25:51 (20094): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN