Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:55:52 (3275201): wrapper (7.7.26015): starting
18:55:52 (3275201): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 18:55:52] Arguments: --nthreads 12
[2025-10-11 18:55:52] Threads: 12
[2025-10-11 18:55:52] Checking for CVMFS
[2025-10-11 18:55:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:55:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:55:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:55:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:55:53] 2.11.5.0 2851 30822 201336 151602 0 387 32595621 45568000 20991 130560 0 306303223 99.861 133681778 26762 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 18:55:53] CVMFS is ok
[2025-10-11 18:55:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:55:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:55:53] Further information can be found at the LHC@home message board.
[2025-10-11 18:55:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:55:53] Checking for apptainer binary...
[2025-10-11 18:55:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:55:53] Running /usr/bin/apptainer --version
[2025-10-11 18:55:53] apptainer version 1.4.1-1.el9
[2025-10-11 18:55:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:55:53] wns0087.triumf.lcg
[2025-10-11 18:55:53] apptainer works
[2025-10-11 18:55:53] Set ATHENA_PROC_NUMBER=12
[2025-10-11 18:55:53] Set ATHENA_CORE_NUMBER=12
[2025-10-11 18:55:54] Starting ATLAS job with PandaID=6839162599
[2025-10-11 18:55:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:00:37]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:00:37] 2025-10-12 02:00:03,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:00:37] 2025-10-12 02:00:03,808 | WARNING  | wrong length of table data, x=[1760234246.0], y=[1103.0] (must be same and length>=4)
[2025-10-11 19:00:37] 2025-10-12 02:00:03,809 | INFO     | could have reported an average CPU frequency of 2641 MHz (4 samples)
[2025-10-11 19:00:37] 2025-10-12 02:00:03,809 | INFO     | ..............................
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . Timing measurements:
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . get job = 0 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . initial setup = 3 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . payload setup = 16 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . stage-in = 0 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . payload execution = 40 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . stage-out = 0 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . log creation = 0 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | ..............................
[2025-10-11 19:00:37] 2025-10-12 02:00:03,818 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 19:00:37] 2025-10-12 02:00:03,818 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162599/pilotlog.txt
[2025-10-11 19:00:37] 2025-10-12 02:00:04,005 | INFO     | monitor loop #71: job 0:6839162599 is in state 'failed'
[2025-10-11 19:00:37] 2025-10-12 02:00:04,006 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-11 19:00:37] 2025-10-12 02:00:04,063 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 19:00:37] - Log from pilotlog.txt -
[2025-10-11 19:00:37] 2025-10-12 02:00:03,807 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:00:37] 2025-10-12 02:00:03,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:00:37] 2025-10-12 02:00:03,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:00:37] 2025-10-12 02:00:03,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:00:37] 2025-10-12 02:00:03,808 | WARNING  | wrong length of table data, x=[1760234246.0], y=[1103.0] (must be same and length>=4)
[2025-10-11 19:00:37] 2025-10-12 02:00:03,809 | INFO     | could have reported an average CPU frequency of 2641 MHz (4 samples)
[2025-10-11 19:00:37] 2025-10-12 02:00:03,809 | INFO     | ..............................
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . Timing measurements:
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . get job = 0 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . initial setup = 3 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . payload setup = 16 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . stage-in = 0 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . payload execution = 40 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . stage-out = 0 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . log creation = 0 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | ..............................
[2025-10-11 19:00:37] 2025-10-12 02:00:03,818 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 19:00:37] 2025-10-12 02:00:03,818 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162599/pilotlog.txt
[2025-10-11 19:00:37] 2025-10-12 02:00:04,005 | INFO     | monitor loop #71: job 0:6839162599 is in state 'failed'
[2025-10-11 19:00:37] 2025-10-12 02:00:04,006 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-11 19:00:37] 2025-10-12 02:00:04,063 | WARNING  | 
[2025-10-11 19:00:37] [begin log extracts]
[2025-10-11 19:00:37] - Log from pilotlog.txt -
[2025-10-11 19:00:37] 2025-10-12 02:00:03,807 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 19:00:37] 2025-10-12 02:00:03,807 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 19:00:37] 2025-10-12 02:00:03,808 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 19:00:37] 2025-10-12 02:00:03,808 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:00:37] 2025-10-12 02:00:03,808 | WARNING  | wrong length of table data, x=[1760234246.0], y=[1103.0] (must be same and length>=4)
[2025-10-11 19:00:37] 2025-10-12 02:00:03,809 | INFO     | could have reported an average CPU frequency of 2641 MHz (4 samples)
[2025-10-11 19:00:37] 2025-10-12 02:00:03,809 | INFO     | ..............................
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . Timing measurements:
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . get job = 0 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . initial setup = 3 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . payload setup = 16 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . stage-in = 0 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . payload execution = 40 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . stage-out = 0 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | . log creation = 0 s
[2025-10-11 19:00:37] 2025-10-12 02:00:03,817 | INFO     | ..............................
[2025-10-11 19:00:37] 2025-10-12 02:00:03,818 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 19:00:37] 2025-10-12 02:00:03,818 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162599/pilotlog.txt
[2025-10-11 19:00:37] 2025-10-12 02:00:04,005 | INFO     | monitor loop #71: job 0:6839162599 is in state 'failed'
[2025-10-11 19:00:37] 2025-10-12 02:00:04,006 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-10-11 19:00:37] [end log extracts]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,064 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 19:00:37] 2025-10-12 02:00:04,065 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 19:00:37] 2025-10-12 02:00:04,408 | INFO     | 
[2025-10-11 19:00:37] 2025-10-12 02:00:04,408 | INFO     | job summary report
[2025-10-11 19:00:37] 2025-10-12 02:00:04,408 | INFO     | --------------------------------------------------
[2025-10-11 19:00:37] 2025-10-12 02:00:04,408 | INFO     | PanDA job id: 6839162599
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | task id: 46676269
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 18:57:44,106 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | pilot state: failed 
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | transexitcode: 65
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | exeerrorcode: 65
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | exitcode: 65
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | cpuconsumptiontime: 17 s
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | nevents: 0
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | neventsw: 0
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | pid: 3298447
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | pgrp: 3298447
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | corecount: 12
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | event service: False
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | sizes: {0: 2348803, 11: 2348803, 12: 2349093, 22: 2349121, 60: 2372579, 61: 2372555, 62: 2377003, 63: 2377031, 192: 2377197}
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | --------------------------------------------------
[2025-10-11 19:00:37] 2025-10-12 02:00:04,409 | INFO     | 
[2025-10-11 19:00:37] 2025-10-12 02:00:04,410 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 19:00:37] 2025-10-12 02:00:04,516 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,517 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,517 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,517 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,530 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,530 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,531 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,531 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,531 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:00:37] 2025-10-12 02:00:04,531 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,531 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:00:37] 2025-10-12 02:00:04,531 | INFO     | job 6839162599 has completed (purged errors)
[2025-10-11 19:00:37] 2025-10-12 02:00:04,531 | INFO     | overall cleanup function is called
[2025-10-11 19:00:37] 2025-10-12 02:00:05,538 | INFO     | --- collectZombieJob: --- 10, [3298447]
[2025-10-11 19:00:37] 2025-10-12 02:00:05,538 | INFO     | zombie collector waiting for pid 3298447
[2025-10-11 19:00:37] 2025-10-12 02:00:05,538 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:00:37] 2025-10-12 02:00:05,538 | INFO     | collected zombie processes
[2025-10-11 19:00:37] 2025-10-12 02:00:05,538 | INFO     | will attempt to kill all subprocesses of pid=3298447
[2025-10-11 19:00:37] 2025-10-12 02:00:06,133 | INFO     | process IDs to be killed: [3298447] (in reverse order)
[2025-10-11 19:00:37] 2025-10-12 02:00:06,636 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:00:37] 2025-10-12 02:00:06,637 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:00:37] 2025-10-12 02:00:06,670 | INFO     | did not find any defunct processes belonging to 3298447
[2025-10-11 19:00:37] 2025-10-12 02:00:06,709 | INFO     | did not find any defunct processes belonging to 3298447
[2025-10-11 19:00:37] 2025-10-12 02:00:06,709 | INFO     | ready for new job
[2025-10-11 19:00:37] 2025-10-12 02:00:06,709 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:00:37] 2025-10-12 02:00:06,715 | INFO     | ***************************************
[2025-10-11 19:00:37] 2025-10-12 02:00:06,715 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:00:37] 2025-10-12 02:00:06,715 | INFO     | ***************************************
[2025-10-11 19:00:37] 2025-10-12 02:00:06,715 | INFO     | 
[2025-10-11 19:00:37] 2025-10-12 02:00:06,717 | INFO     | architecture information:
[2025-10-11 19:00:37] 2025-10-12 02:00:06,723 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:00:37] 2025-10-12 02:00:06,771 | INFO     | cat /etc/os-release:
[2025-10-11 19:00:37] NAME="CentOS Linux"
[2025-10-11 19:00:37] VERSION="7 (Core)"
[2025-10-11 19:00:37] ID="centos"
[2025-10-11 19:00:37] ID_LIKE="rhel fedora"
[2025-10-11 19:00:37] VERSION_ID="7"
[2025-10-11 19:00:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:00:37] ANSI_COLOR="0;31"
[2025-10-11 19:00:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:00:37] HOME_URL="https://www.centos.org/"
[2025-10-11 19:00:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:00:37] 
[2025-10-11 19:00:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:00:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:00:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:00:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:00:37] 
[2025-10-11 19:00:37] 2025-10-12 02:00:06,772 | INFO     | ***************************************
[2025-10-11 19:00:37] 2025-10-12 02:00:07,275 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 19:00:37] 2025-10-12 02:00:07,314 | INFO     | sufficient remaining disk space (1808188571648 B)
[2025-10-11 19:00:37] 2025-10-12 02:00:07,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:00:37] 2025-10-12 02:00:07,314 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:00:37] 2025-10-12 02:00:07,314 | INFO     | update_server=False
[2025-10-11 19:00:37] 2025-10-12 02:00:07,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:00:37] 2025-10-12 02:00:07,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:00:37] 2025-10-12 02:00:07,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:00:37] 2025-10-12 02:00:07,527 | INFO     | aborting loop
[2025-10-11 19:00:37] 2025-10-12 02:00:07,541 | INFO     | all data control threads have been joined
[2025-10-11 19:00:37] 2025-10-12 02:00:07,646 | INFO     | all job control threads have been joined
[2025-10-11 19:00:37] 2025-10-12 02:00:07,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:00:37] 2025-10-12 02:00:08,280 | INFO     | all payload control threads have been joined
[2025-10-11 19:00:37] 2025-10-12 02:00:08,330 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:08,439 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:08,536 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:08,547 | INFO     | [data] control thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:08,652 | INFO     | [job] control thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:08,774 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:08,898 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:09,256 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:09,288 | INFO     | [payload] control thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:09,413 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:09,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:00:37] 2025-10-12 02:00:09,458 | INFO     | [job] validate thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:09,693 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:09,735 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:09,801 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:10,428 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:11,330 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:00:37] 2025-10-12 02:00:17,529 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:00:37] 2025-10-12 02:00:19,320 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139681629968192)>', '<ExcThread(monitor, started 139680792180480)>']
[2025-10-11 19:00:37] 2025-10-12 02:00:24,345 | INFO     | all workflow threads have been joined
[2025-10-11 19:00:37] 2025-10-12 02:00:24,345 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:00:37] 2025-10-12 02:00:24,346 | INFO     | traces error code: 0
[2025-10-11 19:00:37] 2025-10-12 02:00:24,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:00:37] 2025-10-12 02:00:36,730 | INFO     | PID=3290773 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 19:00:37] 2025-10-12 02:00:36,731 | INFO     | .. there are 35 such processes running
[2025-10-11 19:00:37] 2025-10-12 02:00:36,731 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:00:37] 2025-10-12 02:00:36,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:00:37] 2025-10-12 02:00:36,731 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:00:37] 2025-10-12 02:00:36,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:00:37] 2025-10-12 02:00:36,732 | INFO     | [monitor] control thread has ended
[2025-10-11 19:00:37] 2025-10-12 02:00:36,846 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:00:37] 2025-10-12 02:00:36,849 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:00:37] 2025-10-12 02:00:36,854 [wrapper] pilotpid: 3290773
[2025-10-11 19:00:37] 2025-10-12 02:00:36,859 [wrapper] Pilot exit status: 0
[2025-10-11 19:00:37] 2025-10-12 02:00:36,879 [wrapper] pandaids: 6839162599
[2025-10-11 19:00:37] 2025-10-12 02:00:36,938 [wrapper] cleanup supervisor_pilot 3290786 3290774
[2025-10-11 19:00:37] 2025-10-12 02:00:36,942 [wrapper] Test setup, not cleaning
[2025-10-11 19:00:37] 2025-10-12 02:00:36,947 [wrapper] apfmon messages muted
[2025-10-11 19:00:37] 2025-10-12 02:00:36,950 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:00:37] 2025-10-12 02:00:36,954 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:00:37]  *** Error codes and diagnostics ***
[2025-10-11 19:00:37]     "exeErrorCode": 65,
[2025-10-11 19:00:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 19:00:37]     "pilotErrorCode": 1305,
[2025-10-11 19:00:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 19:00:37]  *** Listing of results directory ***
[2025-10-11 19:00:37] total 220256
[2025-10-11 19:00:37] -rw-r--r--. 1 boinc boinc    557409 Oct 11 16:21 pilot3.tar.gz
[2025-10-11 19:00:37] -rwx------. 1 boinc boinc     36292 Oct 11 16:29 runpilot2-wrapper.sh
[2025-10-11 19:00:37] -rw-r--r--. 1 boinc boinc      5112 Oct 11 16:29 queuedata.json
[2025-10-11 19:00:37] -rw-r--r--. 1 boinc boinc       100 Oct 11 18:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:00:37] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 18:55 run_atlas
[2025-10-11 19:00:37] -rw-r--r--. 1 boinc boinc       105 Oct 11 18:55 job.xml
[2025-10-11 19:00:37] -rw-r--r--. 1 boinc boinc      6594 Oct 11 18:55 init_data.xml
[2025-10-11 19:00:37] -rw-r--r--. 2 boinc boinc 221412656 Oct 11 18:55 EVNT.46676267._002712.pool.root.1
[2025-10-11 19:00:37] -rw-r--r--. 2 boinc boinc     15120 Oct 11 18:55 start_atlas.sh
[2025-10-11 19:00:37] drwxrwx--x. 2 boinc boinc      4096 Oct 11 18:55 shared
[2025-10-11 19:00:37] -rw-r--r--. 2 boinc boinc    569672 Oct 11 18:55 input.tar.gz
[2025-10-11 19:00:37] -rw-r--r--. 1 boinc boinc         0 Oct 11 18:55 boinc_lockfile
[2025-10-11 19:00:37] -rw-r--r--. 1 boinc boinc      2549 Oct 11 18:55 pandaJob.out
[2025-10-11 19:00:37] -rw-------. 1 boinc boinc    975496 Oct 11 18:56 agis_schedconf.cvmfs.json
[2025-10-11 19:00:37] -rw-------. 1 boinc boinc   1560580 Oct 11 18:56 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:00:37] drwx------. 5 boinc boinc      4096 Oct 11 18:56 pilot3
[2025-10-11 19:00:37] -rw-r--r--. 1 boinc boinc       523 Oct 11 18:57 boinc_task_state.xml
[2025-10-11 19:00:37] -rw-------. 1 boinc boinc       945 Oct 11 18:57 memory_monitor_summary.json
[2025-10-11 19:00:37] -rw-------. 1 boinc boinc     22003 Oct 11 18:57 log.46676269._067022.job.log.tgz.1
[2025-10-11 19:00:37] -rw-------. 1 boinc boinc      8407 Oct 11 19:00 heartbeat.json
[2025-10-11 19:00:37] -rw-r--r--. 1 boinc boinc        22 Oct 11 19:00 wrapper_checkpoint.txt
[2025-10-11 19:00:37] -rw-r--r--. 1 boinc boinc      8192 Oct 11 19:00 boinc_mmap_file
[2025-10-11 19:00:37] -rw-------. 1 boinc boinc       823 Oct 11 19:00 pilotlog.txt
[2025-10-11 19:00:37] -rw-------. 1 boinc boinc        95 Oct 11 19:00 pilot_heartbeat.json
[2025-10-11 19:00:37] -rw-------. 1 boinc boinc     90962 Oct 11 19:00 log.46676269._067022.job.log.1
[2025-10-11 19:00:37] -rw-------. 1 boinc boinc       188 Oct 11 19:00 output.list
[2025-10-11 19:00:37] -rw-r--r--. 1 boinc boinc       620 Oct 11 19:00 runtime_log
[2025-10-11 19:00:37] -rw-------. 1 boinc boinc    133120 Oct 11 19:00 result.tar.gz
[2025-10-11 19:00:37] -rw-r--r--. 1 boinc boinc      8528 Oct 11 19:00 runtime_log.err
[2025-10-11 19:00:37] -rw-------. 1 boinc boinc       644 Oct 11 19:00 kEfLDmKDyR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEyhNDmV4II8m.diag
[2025-10-11 19:00:37] -rw-r--r--. 1 boinc boinc     21329 Oct 11 19:00 stderr.txt
[2025-10-11 19:00:37] No HITS result produced
[2025-10-11 19:00:37]  *** Contents of shared directory: ***
[2025-10-11 19:00:37] total 216936
[2025-10-11 19:00:37] -rw-r--r--. 2 boinc boinc 221412656 Oct 11 18:55 ATLAS.root_0
[2025-10-11 19:00:37] -rw-r--r--. 2 boinc boinc     15120 Oct 11 18:55 start_atlas.sh
[2025-10-11 19:00:37] -rw-r--r--. 2 boinc boinc    569672 Oct 11 18:55 input.tar.gz
[2025-10-11 19:00:37] -rw-------. 1 boinc boinc    133120 Oct 11 19:00 result.tar.gz
19:00:38 (3275201): run_atlas exited; CPU time 26.232913
19:00:38 (3275201): called boinc_finish(0)

</stderr_txt>
]]>

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