Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:36:41 (3909034): wrapper (7.7.26015): starting
09:36:41 (3909034): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 09:36:41] Arguments: --nthreads 4
[2025-10-13 09:36:41] Threads: 4
[2025-10-13 09:36:41] Checking for CVMFS
[2025-10-13 09:36:41] No cvmfs_config command found, will try listing directly
[2025-10-13 09:36:41] CVMFS is ok
[2025-10-13 09:36:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:36:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:36:41] Further information can be found at the LHC@home message board.
[2025-10-13 09:36:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:36:41] Checking for apptainer binary...
[2025-10-13 09:36:41] which: no apptainer in ((null))
[2025-10-13 09:36:41] apptainer is not installed, using version from CVMFS
[2025-10-13 09:36:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:36:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2025-10-13 09:36:42] apptainer works
[2025-10-13 09:36:42] Set ATHENA_PROC_NUMBER=4
[2025-10-13 09:36:42] Set ATHENA_CORE_NUMBER=4
[2025-10-13 09:36:42] Starting ATLAS job with PandaID=6838913635
[2025-10-13 09:36:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:01:41]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:01:41] 2025-10-13 10:53:36,658 | INFO     | time since job start (11803s) is within the limit (172800.0s)
[2025-10-13 13:01:41] 2025-10-13 10:53:38,663 | INFO     | time since job start (11805s) is within the limit (172800.0s)
[2025-10-13 13:01:41] 2025-10-13 10:53:38,667 | INFO     | monitor loop #864: job 0:6838913635 is in state 'finished'
[2025-10-13 13:01:41] 2025-10-13 10:53:38,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 13:01:41] 2025-10-13 10:53:39,360 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 13:01:41] 2025-10-13 10:53:39,366 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2644.841825
[2025-10-13 13:01:41] 2025-10-13 10:53:39,374 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6838913635/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 13:01:41] 2025-10-13 10:53:39,375 | INFO     | extracted standard info from prmon json
[2025-10-13 13:01:41] 2025-10-13 10:53:39,375 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 13:01:41] 2025-10-13 10:53:39,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 13:01:41] 2025-10-13 10:53:39,375 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 13:01:41] 2025-10-13 10:53:39,375 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:01:41] 2025-10-13 10:53:39,379 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:01:41] 2025-10-13 10:53:39,380 | INFO     | sum of square deviations: 2229146912.0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,381 | INFO     | sum of deviations: 5867778246.000009
[2025-10-13 13:01:41] 2025-10-13 10:53:39,381 | INFO     | mean x: 1760346894.0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,381 | INFO     | mean y: 2350465.3316062177
[2025-10-13 13:01:41] 2025-10-13 10:53:39,382 | INFO     | -- intersect: -4631406580.658409
[2025-10-13 13:01:41] 2025-10-13 10:53:39,382 | INFO     | intersect: -4631406580.658409
[2025-10-13 13:01:41] 2025-10-13 10:53:39,382 | INFO     | chi2: 1.4410575001350432
[2025-10-13 13:01:41] 2025-10-13 10:53:39,382 | INFO     | sum of square deviations: 2060343747.0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,384 | INFO     | sum of deviations: 4993996952.499998
[2025-10-13 13:01:41] 2025-10-13 10:53:39,384 | INFO     | mean x: 1760346741.5
[2025-10-13 13:01:41] 2025-10-13 10:53:39,384 | INFO     | mean y: 2349679.7712765955
[2025-10-13 13:01:41] 2025-10-13 10:53:39,384 | INFO     | -- intersect: -4264494760.7230997
[2025-10-13 13:01:41] 2025-10-13 10:53:39,384 | INFO     | intersect: -4264494760.7230997
[2025-10-13 13:01:41] 2025-10-13 10:53:39,385 | INFO     | chi2: 1.43981447789726
[2025-10-13 13:01:41] 2025-10-13 10:53:39,385 | INFO     | current chi2=1.43981447789726 (change=0.08625764327008399 %)
[2025-10-13 13:01:41] 2025-10-13 10:53:39,385 | INFO     | right removable region: 187
[2025-10-13 13:01:41] 2025-10-13 10:53:39,385 | INFO     | sum of square deviations: 2060343747.0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,386 | INFO     | sum of deviations: -18982504996.499996
[2025-10-13 13:01:41] 2025-10-13 10:53:39,387 | INFO     | mean x: 1760347046.5
[2025-10-13 13:01:41] 2025-10-13 10:53:39,387 | INFO     | mean y: 2372612.664893617
[2025-10-13 13:01:41] 2025-10-13 10:53:39,387 | INFO     | -- intersect: 16220926751.708889
[2025-10-13 13:01:41] 2025-10-13 10:53:39,387 | INFO     | intersect: 16220926751.708889
[2025-10-13 13:01:41] 2025-10-13 10:53:39,387 | INFO     | chi2: 0.09946970677905351
[2025-10-13 13:01:41] 2025-10-13 10:53:39,387 | INFO     | current chi2=0.09946970677905351 (change=93.09745053408818 %)
[2025-10-13 13:01:41] 2025-10-13 10:53:39,388 | INFO     | sum of square deviations: 1900284932.0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,389 | INFO     | sum of deviations: -18947492795.999992
[2025-10-13 13:01:41] 2025-10-13 10:53:39,389 | INFO     | mean x: 1760347199.0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,389 | INFO     | mean y: 2372564.6174863386
[2025-10-13 13:01:41] 2025-10-13 10:53:39,389 | INFO     | -- intersect: 17554564506.91052
[2025-10-13 13:01:41] 2025-10-13 10:53:39,390 | INFO     | intersect: 17554564506.91052
[2025-10-13 13:01:41] 2025-10-13 10:53:39,390 | INFO     | chi2: 0.09483291463131051
[2025-10-13 13:01:41] 2025-10-13 10:53:39,390 | INFO     | current chi2=0.09483291463131051 (change=4.661511828965622 %)
[2025-10-13 13:01:41] 2025-10-13 10:53:39,390 | INFO     | left removable region: 20
[2025-10-13 13:01:41] 2025-10-13 10:53:39,390 | INFO     | sum of square deviations: 1444149868.0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,391 | INFO     | sum of deviations: -12019873954.0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,392 | INFO     | mean x: 1760347321.0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,392 | INFO     | mean y: 2364470.0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,392 | INFO     | -- intersect: 14653996812.69089
[2025-10-13 13:01:41] 2025-10-13 10:53:39,392 | INFO     | intersect: 14653996812.69089
[2025-10-13 13:01:41] 2025-10-13 10:53:39,392 | INFO     | chi2: 0.07830779548199829
[2025-10-13 13:01:41] 2025-10-13 10:53:39,392 | INFO     | -- intersect: 14653996812.69089
[2025-10-13 13:01:41] 2025-10-13 10:53:39,393 | INFO     | current memory leak: -8.32 B/s (using 167 data points, chi2=0.08)
[2025-10-13 13:01:41] 2025-10-13 10:53:39,393 | INFO     | could have reported an average CPU frequency of 2608 MHz (10 samples)
[2025-10-13 13:01:41] 2025-10-13 10:53:39,393 | INFO     | ..............................
[2025-10-13 13:01:41] 2025-10-13 10:53:39,393 | INFO     | . Timing measurements:
[2025-10-13 13:01:41] 2025-10-13 10:53:39,393 | INFO     | . get job = 0 s
[2025-10-13 13:01:41] 2025-10-13 10:53:39,394 | INFO     | . initial setup = 1 s
[2025-10-13 13:01:41] 2025-10-13 10:53:39,394 | INFO     | . payload setup = 5 s
[2025-10-13 13:01:41] 2025-10-13 10:53:39,394 | INFO     | . stage-in = 0 s
[2025-10-13 13:01:41] 2025-10-13 10:53:39,394 | INFO     | . payload execution = 11772 s
[2025-10-13 13:01:41] 2025-10-13 10:53:39,394 | INFO     | . stage-out = 1 s
[2025-10-13 13:01:41] 2025-10-13 10:53:39,394 | INFO     | . log creation = 0 s
[2025-10-13 13:01:41] 2025-10-13 10:53:39,394 | INFO     | ..............................
[2025-10-13 13:01:41] 2025-10-13 10:53:39,501 | INFO     | 
[2025-10-13 13:01:41] 2025-10-13 10:53:39,501 | INFO     | job summary report
[2025-10-13 13:01:41] 2025-10-13 10:53:39,501 | INFO     | --------------------------------------------------
[2025-10-13 13:01:41] 2025-10-13 10:53:39,501 | INFO     | PanDA job id: 6838913635
[2025-10-13 13:01:41] 2025-10-13 10:53:39,502 | INFO     | task id: 46676269
[2025-10-13 13:01:41] 2025-10-13 10:53:39,502 | INFO     | errors: (none)
[2025-10-13 13:01:41] 2025-10-13 10:53:39,502 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:01:41] 2025-10-13 10:53:39,502 | INFO     | pilot state: finished 
[2025-10-13 13:01:41] 2025-10-13 10:53:39,502 | INFO     | transexitcode: 0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,502 | INFO     | exeerrorcode: 0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,502 | INFO     | exeerrordiag: 
[2025-10-13 13:01:41] 2025-10-13 10:53:39,503 | INFO     | exitcode: 0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,503 | INFO     | exitmsg: OK
[2025-10-13 13:01:41] 2025-10-13 10:53:39,503 | INFO     | cpuconsumptiontime: 45091 s
[2025-10-13 13:01:41] 2025-10-13 10:53:39,503 | INFO     | nevents: 400
[2025-10-13 13:01:41] 2025-10-13 10:53:39,503 | INFO     | neventsw: 0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,503 | INFO     | pid: 3930205
[2025-10-13 13:01:41] 2025-10-13 10:53:39,503 | INFO     | pgrp: 3930205
[2025-10-13 13:01:41] 2025-10-13 10:53:39,503 | INFO     | corecount: 4
[2025-10-13 13:01:41] 2025-10-13 10:53:39,504 | INFO     | event service: False
[2025-10-13 13:01:41] 2025-10-13 10:53:39,504 | INFO     | sizes: {0: 2348029, 1: 2348896, 5: 2349158, 12: 2349214, 11781: 2378715, 11782: 2378714, 11783: 2387918, 11785: 2387974, 11790: 2388168}
[2025-10-13 13:01:41] 2025-10-13 10:53:39,504 | INFO     | --------------------------------------------------
[2025-10-13 13:01:41] 2025-10-13 10:53:39,504 | INFO     | 
[2025-10-13 13:01:41] 2025-10-13 10:53:39,504 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-13 13:01:41] 2025-10-13 10:53:39,524 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,524 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,525 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,525 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,525 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,525 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,525 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,525 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,525 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,525 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,525 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,526 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,526 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,526 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,526 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,526 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,526 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,526 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:01:41] 2025-10-13 10:53:39,526 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,526 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:01:41] 2025-10-13 10:53:39,527 | INFO     | job 6838913635 has completed (purged errors)
[2025-10-13 13:01:41] 2025-10-13 10:53:39,527 | INFO     | overall cleanup function is called
[2025-10-13 13:01:41] 2025-10-13 10:53:40,535 | INFO     | --- collectZombieJob: --- 10, [3930205]
[2025-10-13 13:01:41] 2025-10-13 10:53:40,535 | INFO     | zombie collector waiting for pid 3930205
[2025-10-13 13:01:41] 2025-10-13 10:53:40,535 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:01:41] 2025-10-13 10:53:40,535 | INFO     | collected zombie processes
[2025-10-13 13:01:41] 2025-10-13 10:53:40,535 | INFO     | will attempt to kill all subprocesses of pid=3930205
[2025-10-13 13:01:41] 2025-10-13 10:53:40,841 | INFO     | process IDs to be killed: [3930205] (in reverse order)
[2025-10-13 13:01:41] 2025-10-13 10:53:40,917 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:01:41] 2025-10-13 10:53:40,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:01:41] 2025-10-13 10:53:40,925 | INFO     | did not find any defunct processes belonging to 3930205
[2025-10-13 13:01:41] 2025-10-13 10:53:40,932 | INFO     | did not find any defunct processes belonging to 3930205
[2025-10-13 13:01:41] 2025-10-13 10:53:40,932 | INFO     | ready for new job
[2025-10-13 13:01:41] 2025-10-13 10:53:40,932 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:01:41] 2025-10-13 10:53:40,934 | INFO     | ***************************************
[2025-10-13 13:01:41] 2025-10-13 10:53:40,934 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:01:41] 2025-10-13 10:53:40,934 | INFO     | ***************************************
[2025-10-13 13:01:41] 2025-10-13 10:53:40,934 | INFO     | 
[2025-10-13 13:01:41] 2025-10-13 10:53:40,937 | INFO     | architecture information:
[2025-10-13 13:01:41] 2025-10-13 10:53:40,937 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:01:41] 2025-10-13 10:53:40,951 | INFO     | cat /etc/os-release:
[2025-10-13 13:01:41] NAME="CentOS Linux"
[2025-10-13 13:01:41] VERSION="7 (Core)"
[2025-10-13 13:01:41] ID="centos"
[2025-10-13 13:01:41] ID_LIKE="rhel fedora"
[2025-10-13 13:01:41] VERSION_ID="7"
[2025-10-13 13:01:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:01:41] ANSI_COLOR="0;31"
[2025-10-13 13:01:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:01:41] HOME_URL="https://www.centos.org/"
[2025-10-13 13:01:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:01:41] 
[2025-10-13 13:01:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:01:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:01:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:01:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:01:41] 
[2025-10-13 13:01:41] 2025-10-13 10:53:40,951 | INFO     | ***************************************
[2025-10-13 13:01:41] 2025-10-13 10:53:41,452 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-13 13:01:41] 2025-10-13 10:53:41,467 | INFO     | sufficient remaining disk space (1675329798144 B)
[2025-10-13 13:01:41] 2025-10-13 10:53:41,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:01:41] 2025-10-13 10:53:41,468 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:01:41] 2025-10-13 10:53:41,468 | INFO     | update_server=False
[2025-10-13 13:01:41] 2025-10-13 10:53:41,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:01:41] 2025-10-13 10:53:41,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:01:41] 2025-10-13 10:53:41,719 | INFO     | all data control threads have been joined
[2025-10-13 13:01:41] 2025-10-13 10:53:41,970 | INFO     | all payload control threads have been joined
[2025-10-13 13:01:41] 2025-10-13 10:53:41,978 | INFO     | all job control threads have been joined
[2025-10-13 13:01:41] 2025-10-13 10:53:42,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:01:41] 2025-10-13 10:53:42,175 | INFO     | aborting loop
[2025-10-13 13:01:41] 2025-10-13 10:53:42,473 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:42,474 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:42,498 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:01:41] 2025-10-13 10:53:42,725 | INFO     | [data] control thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:42,779 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:42,840 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:42,975 | INFO     | [payload] control thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:42,984 | INFO     | [job] control thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:42,984 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:43,041 | INFO     | [job] validate thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:43,181 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:43,292 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:43,575 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:43,594 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:43,915 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:44,503 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:53:44,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:01:41] 2025-10-13 10:53:48,816 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:01:41] 2025-10-13 10:54:10,737 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:01:41] 2025-10-13 10:54:12,096 | INFO     | PID=3916671 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:01:41] 2025-10-13 10:54:12,097 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:01:41] 2025-10-13 10:54:12,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:01:41] 2025-10-13 10:54:12,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:01:41] 2025-10-13 10:54:12,556 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22412375549760)>', '<ExcThread(monitor, started 22412064163584)>']
[2025-10-13 13:01:41] 2025-10-13 10:54:13,102 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:01:41] 2025-10-13 10:54:13,103 | INFO     | [monitor] control thread has ended
[2025-10-13 13:01:41] 2025-10-13 10:54:17,581 | INFO     | all workflow threads have been joined
[2025-10-13 13:01:41] 2025-10-13 10:54:17,581 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:01:41] 2025-10-13 10:54:17,581 | INFO     | traces error code: 0
[2025-10-13 13:01:41] 2025-10-13 10:54:17,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:01:41] 2025-10-13 10:54:17,690 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:01:41] 2025-10-13 10:54:17,692 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:01:41] 2025-10-13 10:54:17,695 [wrapper] pilotpid: 3916671
[2025-10-13 13:01:41] 2025-10-13 10:54:17,698 [wrapper] Pilot exit status: 0
[2025-10-13 13:01:41] 2025-10-13 10:54:17,706 [wrapper] pandaids: 6838913635
[2025-10-13 13:01:41] 2025-10-13 10:54:17,755 [wrapper] cleanup supervisor_pilot 4062556 3916672
[2025-10-13 13:01:41] 2025-10-13 10:54:17,758 [wrapper] Test setup, not cleaning
[2025-10-13 13:01:41] 2025-10-13 10:54:17,760 [wrapper] apfmon messages muted
[2025-10-13 13:01:41] 2025-10-13 10:54:17,763 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:01:41] 2025-10-13 10:54:17,765 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:01:41]  *** Error codes and diagnostics ***
[2025-10-13 13:01:41]     "exeErrorCode": 0,
[2025-10-13 13:01:41]     "exeErrorDiag": "",
[2025-10-13 13:01:41]     "pilotErrorCode": 0,
[2025-10-13 13:01:41]     "pilotErrorDiag": "",
[2025-10-13 13:01:41]  *** Listing of results directory ***
[2025-10-13 13:01:41] total 418696
[2025-10-13 13:01:41] -rw-r--r-- 1 boinc boinc      5112 Oct 11 22:53 queuedata.json
[2025-10-13 13:01:41] -rw-r--r-- 1 boinc boinc    557409 Oct 11 22:53 pilot3.tar.gz
[2025-10-13 13:01:41] -rwx------ 1 boinc boinc     36292 Oct 11 22:55 runpilot2-wrapper.sh
[2025-10-13 13:01:41] -rw-r--r-- 1 boinc boinc       100 Oct 13 09:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:01:41] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 09:36 run_atlas
[2025-10-13 13:01:41] -rw-r--r-- 1 boinc boinc       105 Oct 13 09:36 job.xml
[2025-10-13 13:01:41] -rw-r--r-- 1 boinc boinc      6421 Oct 13 09:36 init_data.xml
[2025-10-13 13:01:41] -rw-r--r-- 2 boinc boinc 222688771 Oct 13 09:36 EVNT.46676267._002606.pool.root.1
[2025-10-13 13:01:41] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:36 start_atlas.sh
[2025-10-13 13:01:41] drwxrwx--x 2 boinc boinc      4096 Oct 13 09:36 shared
[2025-10-13 13:01:41] -rw-r--r-- 2 boinc boinc    569682 Oct 13 09:36 input.tar.gz
[2025-10-13 13:01:41] -rw-r--r-- 1 boinc boinc         0 Oct 13 09:36 boinc_lockfile
[2025-10-13 13:01:41] -rw-r--r-- 1 boinc boinc      2550 Oct 13 09:36 pandaJob.out
[2025-10-13 13:01:41] -rw------- 1 boinc boinc    972849 Oct 13 09:36 agis_schedconf.cvmfs.json
[2025-10-13 13:01:41] drwx------ 5 boinc boinc      4096 Oct 13 09:36 pilot3
[2025-10-13 13:01:41] -rw-r--r-- 1 boinc boinc       527 Oct 13 12:52 boinc_task_state.xml
[2025-10-13 13:01:41] -rw------- 1 boinc boinc 198027491 Oct 13 12:52 HITS.46676269._064888.pool.root.1
[2025-10-13 13:01:41] -rw------- 1 boinc boinc      1031 Oct 13 12:53 memory_monitor_summary.json
[2025-10-13 13:01:41] -rw------- 1 boinc boinc   1560580 Oct 13 12:53 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:01:41] -rw------- 1 boinc boinc    376854 Oct 13 12:53 log.46676269._064888.job.log.tgz.1
[2025-10-13 13:01:41] -rw------- 1 boinc boinc      7827 Oct 13 12:53 heartbeat.json
[2025-10-13 13:01:41] -rw------- 1 boinc boinc        95 Oct 13 12:54 pilot_heartbeat.json
[2025-10-13 13:01:41] -rw------- 1 boinc boinc      4759 Oct 13 12:54 pilotlog.txt
[2025-10-13 13:01:41] -rw------- 1 boinc boinc   1684357 Oct 13 12:54 log.46676269._064888.job.log.1
[2025-10-13 13:01:41] -rw------- 1 boinc boinc       357 Oct 13 12:54 output.list
[2025-10-13 13:01:41] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:54 runtime_log
[2025-10-13 13:01:41] -rw------- 1 boinc boinc   2078720 Oct 13 12:54 result.tar.gz
[2025-10-13 13:01:41] -rw-r--r-- 1 boinc boinc      9070 Oct 13 12:54 runtime_log.err
[2025-10-13 13:01:41] -rw------- 1 boinc boinc       664 Oct 13 12:54 L6HMDmEovR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4bhNDm2VXDxn.diag
[2025-10-13 13:01:41] -rw-r--r-- 1 boinc boinc        26 Oct 13 13:01 wrapper_checkpoint.txt
[2025-10-13 13:01:41] -rw-r--r-- 1 boinc boinc      8192 Oct 13 13:01 boinc_mmap_file
[2025-10-13 13:01:41] -rw-r--r-- 1 boinc boinc     20958 Oct 13 13:01 stderr.txt
[2025-10-13 13:01:41] HITS file was successfully produced:
[2025-10-13 13:01:41] -rw------- 1 boinc boinc 198027491 Oct 13 12:52 shared/HITS.pool.root.1
[2025-10-13 13:01:41]  *** Contents of shared directory: ***
[2025-10-13 13:01:41] total 413476
[2025-10-13 13:01:41] -rw-r--r-- 2 boinc boinc 222688771 Oct 13 09:36 ATLAS.root_0
[2025-10-13 13:01:41] -rw-r--r-- 2 boinc boinc     15120 Oct 13 09:36 start_atlas.sh
[2025-10-13 13:01:41] -rw-r--r-- 2 boinc boinc    569682 Oct 13 09:36 input.tar.gz
[2025-10-13 13:01:41] -rw------- 1 boinc boinc 198027491 Oct 13 12:52 HITS.pool.root.1
[2025-10-13 13:01:41] -rw------- 1 boinc boinc   2078720 Oct 13 12:54 result.tar.gz
13:01:43 (3909034): run_atlas exited; CPU time 45529.283976
13:01:43 (3909034): called boinc_finish(0)

</stderr_txt>
]]>

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