Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:28:40 (3372181): wrapper (7.7.26015): starting
05:28:40 (3372181): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 05:28:40] Arguments: --nthreads 4
[2025-10-13 05:28:40] Threads: 4
[2025-10-13 05:28:40] Checking for CVMFS
[2025-10-13 05:28:40] No cvmfs_config command found, will try listing directly
[2025-10-13 05:28:40] CVMFS is ok
[2025-10-13 05:28:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:28:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:28:40] Further information can be found at the LHC@home message board.
[2025-10-13 05:28:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:28:40] Checking for apptainer binary...
[2025-10-13 05:28:40] which: no apptainer in ((null))
[2025-10-13 05:28:40] apptainer is not installed, using version from CVMFS
[2025-10-13 05:28:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:28:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-10-13 05:28:40] apptainer works
[2025-10-13 05:28:40] Set ATHENA_PROC_NUMBER=4
[2025-10-13 05:28:40] Set ATHENA_CORE_NUMBER=4
[2025-10-13 05:28:40] Starting ATLAS job with PandaID=6839162355
[2025-10-13 05:28:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:04:02]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:04:02] 2025-10-13 05:52:36,394 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 08:04:02] 2025-10-13 05:52:36,412 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2733.3183671874995
[2025-10-13 08:04:02] 2025-10-13 05:52:36,434 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6839162355/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:04:02] 2025-10-13 05:52:36,435 | INFO     | extracted standard info from prmon json
[2025-10-13 08:04:02] 2025-10-13 05:52:36,435 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 08:04:02] 2025-10-13 05:52:36,435 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:04:02] 2025-10-13 05:52:36,436 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:04:02] 2025-10-13 05:52:36,436 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:04:02] 2025-10-13 05:52:36,439 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:04:02] 2025-10-13 05:52:36,439 | INFO     | sum of square deviations: 869188390.0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,440 | INFO     | sum of deviations: -16761950270.000004
[2025-10-13 08:04:02] 2025-10-13 05:52:36,440 | INFO     | mean x: 1760330437.0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,440 | INFO     | mean y: 2425838.624113475
[2025-10-13 08:04:02] 2025-10-13 05:52:36,440 | INFO     | -- intersect: 33949693868.471333
[2025-10-13 08:04:02] 2025-10-13 05:52:36,440 | INFO     | intersect: 33949693868.471333
[2025-10-13 08:04:02] 2025-10-13 05:52:36,441 | INFO     | chi2: 1.4329981451725415
[2025-10-13 08:04:02] 2025-10-13 05:52:36,441 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,442 | INFO     | sum of deviations: -15713063962.5
[2025-10-13 08:04:02] 2025-10-13 05:52:36,442 | INFO     | mean x: 1760330284.5
[2025-10-13 08:04:02] 2025-10-13 05:52:36,442 | INFO     | mean y: 2427631.992647059
[2025-10-13 08:04:02] 2025-10-13 05:52:36,442 | INFO     | -- intersect: 35466072635.854225
[2025-10-13 08:04:02] 2025-10-13 05:52:36,442 | INFO     | intersect: 35466072635.854225
[2025-10-13 08:04:02] 2025-10-13 05:52:36,442 | INFO     | chi2: 1.4295202692477278
[2025-10-13 08:04:02] 2025-10-13 05:52:36,442 | INFO     | current chi2=1.4295202692477278 (change=0.242699262140007 %)
[2025-10-13 08:04:02] 2025-10-13 05:52:36,442 | INFO     | right removable region: 135
[2025-10-13 08:04:02] 2025-10-13 05:52:36,443 | INFO     | sum of square deviations: 779958810.0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,443 | INFO     | sum of deviations: -31769691423.500004
[2025-10-13 08:04:02] 2025-10-13 05:52:36,443 | INFO     | mean x: 1760330589.5
[2025-10-13 08:04:02] 2025-10-13 05:52:36,443 | INFO     | mean y: 2450866.9779411764
[2025-10-13 08:04:02] 2025-10-13 05:52:36,444 | INFO     | -- intersect: 71705159926.39975
[2025-10-13 08:04:02] 2025-10-13 05:52:36,444 | INFO     | intersect: 71705159926.39975
[2025-10-13 08:04:02] 2025-10-13 05:52:36,444 | INFO     | chi2: 0.17519516787770537
[2025-10-13 08:04:02] 2025-10-13 05:52:36,444 | INFO     | current chi2=0.17519516787770537 (change=87.77422228577898 %)
[2025-10-13 08:04:02] 2025-10-13 05:52:36,444 | INFO     | sum of square deviations: 697054930.0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,445 | INFO     | sum of deviations: -27233171047.0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,445 | INFO     | mean x: 1760330742.0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,445 | INFO     | mean y: 2442504.4503816795
[2025-10-13 08:04:02] 2025-10-13 05:52:36,445 | INFO     | -- intersect: 68776632504.33809
[2025-10-13 08:04:02] 2025-10-13 05:52:36,445 | INFO     | intersect: 68776632504.33809
[2025-10-13 08:04:02] 2025-10-13 05:52:36,446 | INFO     | chi2: 0.1718704413400236
[2025-10-13 08:04:02] 2025-10-13 05:52:36,446 | INFO     | current chi2=0.1718704413400236 (change=1.8977273049006573 %)
[2025-10-13 08:04:02] 2025-10-13 05:52:36,446 | INFO     | left removable region: 20
[2025-10-13 08:04:02] 2025-10-13 05:52:36,446 | INFO     | sum of square deviations: 471562330.0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,447 | INFO     | sum of deviations: -15942218423.0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,447 | INFO     | mean x: 1760330864.0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,447 | INFO     | mean y: 2423445.9826086955
[2025-10-13 08:04:02] 2025-10-13 05:52:36,447 | INFO     | -- intersect: 59514342327.705635
[2025-10-13 08:04:02] 2025-10-13 05:52:36,447 | INFO     | intersect: 59514342327.705635
[2025-10-13 08:04:02] 2025-10-13 05:52:36,447 | INFO     | chi2: 0.13933358462315726
[2025-10-13 08:04:02] 2025-10-13 05:52:36,447 | INFO     | -- intersect: 59514342327.705635
[2025-10-13 08:04:02] 2025-10-13 05:52:36,447 | INFO     | current memory leak: -33.81 B/s (using 115 data points, chi2=0.14)
[2025-10-13 08:04:02] 2025-10-13 05:52:36,448 | INFO     | could have reported an average CPU frequency of 2717 MHz (8 samples)
[2025-10-13 08:04:02] 2025-10-13 05:52:36,448 | INFO     | ..............................
[2025-10-13 08:04:02] 2025-10-13 05:52:36,448 | INFO     | . Timing measurements:
[2025-10-13 08:04:02] 2025-10-13 05:52:36,448 | INFO     | . get job = 0 s
[2025-10-13 08:04:02] 2025-10-13 05:52:36,448 | INFO     | . initial setup = 1 s
[2025-10-13 08:04:02] 2025-10-13 05:52:36,448 | INFO     | . payload setup = 8 s
[2025-10-13 08:04:02] 2025-10-13 05:52:36,448 | INFO     | . stage-in = 0 s
[2025-10-13 08:04:02] 2025-10-13 05:52:36,448 | INFO     | . payload execution = 8583 s
[2025-10-13 08:04:02] 2025-10-13 05:52:36,449 | INFO     | . stage-out = 0 s
[2025-10-13 08:04:02] 2025-10-13 05:52:36,449 | INFO     | . log creation = 0 s
[2025-10-13 08:04:02] 2025-10-13 05:52:36,449 | INFO     | ..............................
[2025-10-13 08:04:02] 2025-10-13 05:52:36,548 | INFO     | 
[2025-10-13 08:04:02] 2025-10-13 05:52:36,549 | INFO     | job summary report
[2025-10-13 08:04:02] 2025-10-13 05:52:36,549 | INFO     | --------------------------------------------------
[2025-10-13 08:04:02] 2025-10-13 05:52:36,549 | INFO     | PanDA job id: 6839162355
[2025-10-13 08:04:02] 2025-10-13 05:52:36,549 | INFO     | task id: 46676269
[2025-10-13 08:04:02] 2025-10-13 05:52:36,549 | INFO     | errors: (none)
[2025-10-13 08:04:02] 2025-10-13 05:52:36,549 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:04:02] 2025-10-13 05:52:36,549 | INFO     | pilot state: finished 
[2025-10-13 08:04:02] 2025-10-13 05:52:36,549 | INFO     | transexitcode: 0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,550 | INFO     | exeerrorcode: 0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,550 | INFO     | exeerrordiag: 
[2025-10-13 08:04:02] 2025-10-13 05:52:36,550 | INFO     | exitcode: 0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,550 | INFO     | exitmsg: OK
[2025-10-13 08:04:02] 2025-10-13 05:52:36,550 | INFO     | cpuconsumptiontime: 32663 s
[2025-10-13 08:04:02] 2025-10-13 05:52:36,550 | INFO     | nevents: 400
[2025-10-13 08:04:02] 2025-10-13 05:52:36,550 | INFO     | neventsw: 0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,550 | INFO     | pid: 3383669
[2025-10-13 08:04:02] 2025-10-13 05:52:36,550 | INFO     | pgrp: 3383669
[2025-10-13 08:04:02] 2025-10-13 05:52:36,550 | INFO     | corecount: 4
[2025-10-13 08:04:02] 2025-10-13 05:52:36,550 | INFO     | event service: False
[2025-10-13 08:04:02] 2025-10-13 05:52:36,550 | INFO     | sizes: {0: 2348869, 7: 2349131, 11: 2349159, 8594: 2377551, 8595: 2386629, 8604: 2386795}
[2025-10-13 08:04:02] 2025-10-13 05:52:36,551 | INFO     | --------------------------------------------------
[2025-10-13 08:04:02] 2025-10-13 05:52:36,551 | INFO     | 
[2025-10-13 08:04:02] 2025-10-13 05:52:36,551 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-10-13 08:04:02] 2025-10-13 05:52:36,586 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,586 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,586 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,587 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,587 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,587 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,587 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,587 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,587 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,587 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,587 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,587 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,588 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,588 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,588 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:04:02] 2025-10-13 05:52:36,588 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,588 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:04:02] 2025-10-13 05:52:36,588 | INFO     | job 6839162355 has completed (purged errors)
[2025-10-13 08:04:02] 2025-10-13 05:52:36,589 | INFO     | overall cleanup function is called
[2025-10-13 08:04:02] 2025-10-13 05:52:37,598 | INFO     | --- collectZombieJob: --- 10, [3383669]
[2025-10-13 08:04:02] 2025-10-13 05:52:37,598 | INFO     | zombie collector waiting for pid 3383669
[2025-10-13 08:04:02] 2025-10-13 05:52:37,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:04:02] 2025-10-13 05:52:37,599 | INFO     | collected zombie processes
[2025-10-13 08:04:02] 2025-10-13 05:52:37,599 | INFO     | will attempt to kill all subprocesses of pid=3383669
[2025-10-13 08:04:02] 2025-10-13 05:52:38,334 | INFO     | process IDs to be killed: [3383669] (in reverse order)
[2025-10-13 08:04:02] 2025-10-13 05:52:38,574 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:04:02] 2025-10-13 05:52:38,574 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:04:02] 2025-10-13 05:52:38,606 | INFO     | did not find any defunct processes belonging to 3383669
[2025-10-13 08:04:02] 2025-10-13 05:52:38,636 | INFO     | did not find any defunct processes belonging to 3383669
[2025-10-13 08:04:02] 2025-10-13 05:52:38,636 | INFO     | ready for new job
[2025-10-13 08:04:02] 2025-10-13 05:52:38,636 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:04:02] 2025-10-13 05:52:38,638 | INFO     | ***************************************
[2025-10-13 08:04:02] 2025-10-13 05:52:38,638 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:04:02] 2025-10-13 05:52:38,639 | INFO     | ***************************************
[2025-10-13 08:04:02] 2025-10-13 05:52:38,639 | INFO     | 
[2025-10-13 08:04:02] 2025-10-13 05:52:38,647 | INFO     | architecture information:
[2025-10-13 08:04:02] 2025-10-13 05:52:38,647 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:04:02] 2025-10-13 05:52:38,670 | INFO     | cat /etc/os-release:
[2025-10-13 08:04:02] NAME="CentOS Linux"
[2025-10-13 08:04:02] VERSION="7 (Core)"
[2025-10-13 08:04:02] ID="centos"
[2025-10-13 08:04:02] ID_LIKE="rhel fedora"
[2025-10-13 08:04:02] VERSION_ID="7"
[2025-10-13 08:04:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:04:02] ANSI_COLOR="0;31"
[2025-10-13 08:04:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:04:02] HOME_URL="https://www.centos.org/"
[2025-10-13 08:04:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:04:02] 
[2025-10-13 08:04:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:04:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:04:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:04:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:04:02] 
[2025-10-13 08:04:02] 2025-10-13 05:52:38,671 | INFO     | ***************************************
[2025-10-13 08:04:02] 2025-10-13 05:52:39,173 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-10-13 08:04:02] 2025-10-13 05:52:39,200 | INFO     | sufficient remaining disk space (3341585219584 B)
[2025-10-13 08:04:02] 2025-10-13 05:52:39,201 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:04:02] 2025-10-13 05:52:39,201 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:04:02] 2025-10-13 05:52:39,201 | INFO     | update_server=False
[2025-10-13 08:04:02] 2025-10-13 05:52:39,201 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:04:02] 2025-10-13 05:52:39,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:04:02] 2025-10-13 05:52:39,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:04:02] 2025-10-13 05:52:39,584 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 08:04:02] 2025-10-13 05:52:39,584 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 08:04:02] 2025-10-13 05:52:39,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:04:02] 2025-10-13 05:52:39,584 | INFO     | will abort loop
[2025-10-13 08:04:02] 2025-10-13 05:52:39,792 | INFO     | all data control threads have been joined
[2025-10-13 08:04:02] 2025-10-13 05:52:40,090 | INFO     | all job control threads have been joined
[2025-10-13 08:04:02] 2025-10-13 05:52:40,203 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:40,296 | INFO     | all payload control threads have been joined
[2025-10-13 08:04:02] 2025-10-13 05:52:40,590 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:40,670 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:40,798 | INFO     | [data] control thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:41,013 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:41,095 | INFO     | [job] control thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:41,164 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:41,207 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:41,233 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:41,300 | INFO     | [payload] control thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:41,531 | INFO     | [job] validate thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:41,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:04:02] 2025-10-13 05:52:41,605 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:41,695 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:42,562 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:43,209 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:52:50,012 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:04:02] 2025-10-13 05:52:51,017 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:04:02] 2025-10-13 05:53:06,842 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:04:02] 2025-10-13 05:53:08,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22492555548480)>', '<ExcThread(monitor, started 22492320077568)>']
[2025-10-13 08:04:02] 2025-10-13 05:53:09,200 | INFO     | PID=3376189 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:04:02] 2025-10-13 05:53:09,201 | INFO     | .. there are 9 such processes running
[2025-10-13 08:04:02] 2025-10-13 05:53:09,201 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:04:02] 2025-10-13 05:53:09,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:04:02] 2025-10-13 05:53:09,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:04:02] 2025-10-13 05:53:09,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:04:02] 2025-10-13 05:53:09,201 | INFO     | [monitor] control thread has ended
[2025-10-13 08:04:02] 2025-10-13 05:53:13,417 | INFO     | all workflow threads have been joined
[2025-10-13 08:04:02] 2025-10-13 05:53:13,417 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:04:02] 2025-10-13 05:53:13,417 | INFO     | traces error code: 0
[2025-10-13 08:04:02] 2025-10-13 05:53:13,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:04:02] 2025-10-13 05:53:13,567 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:04:02] 2025-10-13 05:53:13,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:04:02] 2025-10-13 05:53:13,576 [wrapper] pilotpid: 3376189
[2025-10-13 08:04:02] 2025-10-13 05:53:13,580 [wrapper] Pilot exit status: 0
[2025-10-13 08:04:02] 2025-10-13 05:53:13,594 [wrapper] pandaids: 6839162355
[2025-10-13 08:04:02] 2025-10-13 05:53:13,761 [wrapper] cleanup supervisor_pilot 3749976 3376190
[2025-10-13 08:04:02] 2025-10-13 05:53:13,766 [wrapper] Test setup, not cleaning
[2025-10-13 08:04:02] 2025-10-13 05:53:13,770 [wrapper] apfmon messages muted
[2025-10-13 08:04:02] 2025-10-13 05:53:13,775 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:04:02] 2025-10-13 05:53:13,778 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:04:02]  *** Error codes and diagnostics ***
[2025-10-13 08:04:02]     "exeErrorCode": 0,
[2025-10-13 08:04:02]     "exeErrorDiag": "",
[2025-10-13 08:04:02]     "pilotErrorCode": 0,
[2025-10-13 08:04:02]     "pilotErrorDiag": "",
[2025-10-13 08:04:02]  *** Listing of results directory ***
[2025-10-13 08:04:02] total 417588
[2025-10-13 08:04:02] -rw-r--r-- 1 boinc boinc    557409 Oct 12 01:21 pilot3.tar.gz
[2025-10-13 08:04:02] -rw-r--r-- 1 boinc boinc      5112 Oct 12 01:23 queuedata.json
[2025-10-13 08:04:02] -rwx------ 1 boinc boinc     36292 Oct 12 01:24 runpilot2-wrapper.sh
[2025-10-13 08:04:02] -rw-r--r-- 1 boinc boinc       100 Oct 13 05:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:04:02] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 05:28 run_atlas
[2025-10-13 08:04:02] -rw-r--r-- 1 boinc boinc       105 Oct 13 05:28 job.xml
[2025-10-13 08:04:02] -rw-r--r-- 1 boinc boinc      6688 Oct 13 05:28 init_data.xml
[2025-10-13 08:04:02] -rw-r--r-- 2 boinc boinc 222224736 Oct 13 05:28 EVNT.46676267._002708.pool.root.1
[2025-10-13 08:04:02] -rw-r--r-- 2 boinc boinc    569678 Oct 13 05:28 input.tar.gz
[2025-10-13 08:04:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:28 start_atlas.sh
[2025-10-13 08:04:02] drwxrwx--x 2 boinc boinc      4096 Oct 13 05:28 shared
[2025-10-13 08:04:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:28 boinc_lockfile
[2025-10-13 08:04:02] -rw-r--r-- 1 boinc boinc      2550 Oct 13 05:28 pandaJob.out
[2025-10-13 08:04:02] -rw------- 1 boinc boinc    974373 Oct 13 05:28 agis_schedconf.cvmfs.json
[2025-10-13 08:04:02] -rw------- 1 boinc boinc   1560580 Oct 13 05:28 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:04:02] drwx------ 5 boinc boinc      4096 Oct 13 05:28 pilot3
[2025-10-13 08:04:02] -rw------- 1 boinc boinc 198364020 Oct 13 07:51 HITS.46676269._066962.pool.root.1
[2025-10-13 08:04:02] -rw-r--r-- 1 boinc boinc       528 Oct 13 07:52 boinc_task_state.xml
[2025-10-13 08:04:02] -rw------- 1 boinc boinc      1024 Oct 13 07:52 memory_monitor_summary.json
[2025-10-13 08:04:02] -rw------- 1 boinc boinc    341352 Oct 13 07:52 log.46676269._066962.job.log.tgz.1
[2025-10-13 08:04:02] -rw------- 1 boinc boinc        95 Oct 13 07:52 pilot_heartbeat.json
[2025-10-13 08:04:02] -rw------- 1 boinc boinc      7786 Oct 13 07:52 heartbeat.json
[2025-10-13 08:04:02] -rw------- 1 boinc boinc      5093 Oct 13 07:53 pilotlog.txt
[2025-10-13 08:04:02] -rw------- 1 boinc boinc   1219583 Oct 13 07:53 log.46676269._066962.job.log.1
[2025-10-13 08:04:02] -rw------- 1 boinc boinc       357 Oct 13 07:53 output.list
[2025-10-13 08:04:02] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:53 runtime_log
[2025-10-13 08:04:02] -rw------- 1 boinc boinc   1576960 Oct 13 07:53 result.tar.gz
[2025-10-13 08:04:02] -rw-r--r-- 1 boinc boinc      9084 Oct 13 07:53 runtime_log.err
[2025-10-13 08:04:02] -rw------- 1 boinc boinc       662 Oct 13 07:53 hJwLDmR8xR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaxhNDm5LOh4n.diag
[2025-10-13 08:04:02] -rw-r--r-- 1 boinc boinc        26 Oct 13 08:03 wrapper_checkpoint.txt
[2025-10-13 08:04:02] -rw-r--r-- 1 boinc boinc      8192 Oct 13 08:04 boinc_mmap_file
[2025-10-13 08:04:02] -rw-r--r-- 1 boinc boinc     20841 Oct 13 08:04 stderr.txt
[2025-10-13 08:04:02] HITS file was successfully produced:
[2025-10-13 08:04:02] -rw------- 1 boinc boinc 198364020 Oct 13 07:51 shared/HITS.pool.root.1
[2025-10-13 08:04:02]  *** Contents of shared directory: ***
[2025-10-13 08:04:02] total 412860
[2025-10-13 08:04:02] -rw-r--r-- 2 boinc boinc 222224736 Oct 13 05:28 ATLAS.root_0
[2025-10-13 08:04:02] -rw-r--r-- 2 boinc boinc    569678 Oct 13 05:28 input.tar.gz
[2025-10-13 08:04:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:28 start_atlas.sh
[2025-10-13 08:04:02] -rw------- 1 boinc boinc 198364020 Oct 13 07:51 HITS.pool.root.1
[2025-10-13 08:04:02] -rw------- 1 boinc boinc   1576960 Oct 13 07:53 result.tar.gz
08:04:03 (3372181): run_atlas exited; CPU time 33215.055043
08:04:03 (3372181): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN