Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:49:33 (4001290): wrapper (7.7.26015): starting
18:49:33 (4001290): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 18:49:33] Arguments: --nthreads 8
[2025-10-11 18:49:33] Threads: 8
[2025-10-11 18:49:33] Checking for CVMFS
[2025-10-11 18:49:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 18:49:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 18:49:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 18:49:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 18:49:34] 2.11.3.0 1858 30806 216444 151602 2 306 30225421 45568001 12020 130560 0 194106032 99.845 82280550 28621 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-11 18:49:34] CVMFS is ok
[2025-10-11 18:49:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 18:49:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 18:49:34] Further information can be found at the LHC@home message board.
[2025-10-11 18:49:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 18:49:34] Checking for apptainer binary...
[2025-10-11 18:49:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 18:49:34] Running /usr/bin/apptainer --version
[2025-10-11 18:49:34] apptainer version 1.4.1-1.el9
[2025-10-11 18:49:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 18:49:34] wns0016.triumf.lcg
[2025-10-11 18:49:34] apptainer works
[2025-10-11 18:49:34] Set ATHENA_PROC_NUMBER=8
[2025-10-11 18:49:34] Set ATHENA_CORE_NUMBER=8
[2025-10-11 18:49:34] Starting ATLAS job with PandaID=6839162343
[2025-10-11 18:49:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 18:55:11]  *** The last 200 lines of the pilot log: ***
[2025-10-11 18:55:11] 2025-10-12 01:54:21,404 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 18:55:11] 2025-10-12 01:54:21,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 18:55:11] 2025-10-12 01:54:21,404 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | WARNING  | wrong length of table data, x=[1760233881.0], y=[1878.0] (must be same and length>=4)
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | ..............................
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . Timing measurements:
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . get job = 0 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . initial setup = 4 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . payload setup = 19 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . stage-in = 0 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . payload execution = 57 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . stage-out = 0 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . log creation = 0 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,406 | INFO     | ..............................
[2025-10-11 18:55:11] 2025-10-12 01:54:21,406 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 18:55:11] 2025-10-12 01:54:21,406 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162343/pilotlog.txt
[2025-10-11 18:55:11] 2025-10-12 01:54:21,427 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-11 18:55:11] - Log from pilotlog.txt -
[2025-10-11 18:55:11] 2025-10-12 01:54:21,401 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839162343/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 18:55:11] 2025-10-12 01:54:21,403 | INFO     | extracted standard info from prmon json
[2025-10-11 18:55:11] 2025-10-12 01:54:21,404 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 18:55:11] 2025-10-12 01:54:21,404 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 18:55:11] 2025-10-12 01:54:21,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 18:55:11] 2025-10-12 01:54:21,404 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | WARNING  | wrong length of table data, x=[1760233881.0], y=[1878.0] (must be same and length>=4)
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | ..............................
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . Timing measurements:
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . get job = 0 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . initial setup = 4 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . payload setup = 19 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . stage-in = 0 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . payload execution = 57 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . stage-out = 0 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . log creation = 0 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,406 | INFO     | ..............................
[2025-10-11 18:55:11] 2025-10-12 01:54:21,406 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 18:55:11] 2025-10-12 01:54:21,406 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162343/pilotlog.txt
[2025-10-11 18:55:11] 2025-10-12 01:54:21,433 | WARNING  | 
[2025-10-11 18:55:11] [begin log extracts]
[2025-10-11 18:55:11] - Log from pilotlog.txt -
[2025-10-11 18:55:11] 2025-10-12 01:54:21,401 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839162343/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 18:55:11] 2025-10-12 01:54:21,403 | INFO     | extracted standard info from prmon json
[2025-10-11 18:55:11] 2025-10-12 01:54:21,404 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 18:55:11] 2025-10-12 01:54:21,404 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 18:55:11] 2025-10-12 01:54:21,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 18:55:11] 2025-10-12 01:54:21,404 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | WARNING  | wrong length of table data, x=[1760233881.0], y=[1878.0] (must be same and length>=4)
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | ..............................
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . Timing measurements:
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . get job = 0 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . initial setup = 4 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . payload setup = 19 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . stage-in = 0 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . payload execution = 57 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . stage-out = 0 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,405 | INFO     | . log creation = 0 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,406 | INFO     | ..............................
[2025-10-11 18:55:11] 2025-10-12 01:54:21,406 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-11 18:55:11] 2025-10-12 01:54:21,406 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839162343/pilotlog.txt
[2025-10-11 18:55:11] [end log extracts]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,433 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-11 18:55:11] 2025-10-12 01:54:21,438 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-11 18:55:11] 2025-10-12 01:54:21,766 | INFO     | 
[2025-10-11 18:55:11] 2025-10-12 01:54:21,767 | INFO     | job summary report
[2025-10-11 18:55:11] 2025-10-12 01:54:21,767 | INFO     | --------------------------------------------------
[2025-10-11 18:55:11] 2025-10-12 01:54:21,767 | INFO     | PanDA job id: 6839162343
[2025-10-11 18:55:11] 2025-10-12 01:54:21,767 | INFO     | task id: 46676269
[2025-10-11 18:55:11] 2025-10-12 01:54:21,767 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-11 18:51:56,995 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-11 18:55:11] 2025-10-12 01:54:21,767 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 18:55:11] 2025-10-12 01:54:21,767 | INFO     | pilot state: failed 
[2025-10-11 18:55:11] 2025-10-12 01:54:21,767 | INFO     | transexitcode: 65
[2025-10-11 18:55:11] 2025-10-12 01:54:21,767 | INFO     | exeerrorcode: 65
[2025-10-11 18:55:11] 2025-10-12 01:54:21,767 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 18:55:11] 2025-10-12 01:54:21,767 | INFO     | exitcode: 65
[2025-10-11 18:55:11] 2025-10-12 01:54:21,767 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-11 18:55:11] 2025-10-12 01:54:21,767 | INFO     | cpuconsumptiontime: 19 s
[2025-10-11 18:55:11] 2025-10-12 01:54:21,768 | INFO     | nevents: 0
[2025-10-11 18:55:11] 2025-10-12 01:54:21,769 | INFO     | neventsw: 0
[2025-10-11 18:55:11] 2025-10-12 01:54:21,769 | INFO     | pid: 4018121
[2025-10-11 18:55:11] 2025-10-12 01:54:21,774 | INFO     | pgrp: 4018121
[2025-10-11 18:55:11] 2025-10-12 01:54:21,774 | INFO     | corecount: 8
[2025-10-11 18:55:11] 2025-10-12 01:54:21,774 | INFO     | event service: False
[2025-10-11 18:55:11] 2025-10-12 01:54:21,775 | INFO     | sizes: {0: 2348681, 1: 2348880, 12: 2348880, 16: 2349170, 23: 2349198, 80: 2372391, 81: 2372495, 82: 2376815, 84: 2376871, 216: 2377037}
[2025-10-11 18:55:11] 2025-10-12 01:54:21,775 | INFO     | --------------------------------------------------
[2025-10-11 18:55:11] 2025-10-12 01:54:21,775 | INFO     | 
[2025-10-11 18:55:11] 2025-10-12 01:54:21,775 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-11 18:55:11] 2025-10-12 01:54:21,875 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,886 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,886 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,886 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,886 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,886 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,890 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,890 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,890 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,890 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,891 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,891 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,891 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,891 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,891 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 18:55:11] 2025-10-12 01:54:21,891 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,891 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 18:55:11] 2025-10-12 01:54:21,894 | INFO     | job 6839162343 has completed (purged errors)
[2025-10-11 18:55:11] 2025-10-12 01:54:21,895 | INFO     | overall cleanup function is called
[2025-10-11 18:55:11] 2025-10-12 01:54:22,907 | INFO     | --- collectZombieJob: --- 10, [4018121]
[2025-10-11 18:55:11] 2025-10-12 01:54:22,907 | INFO     | zombie collector waiting for pid 4018121
[2025-10-11 18:55:11] 2025-10-12 01:54:22,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 18:55:11] 2025-10-12 01:54:22,907 | INFO     | collected zombie processes
[2025-10-11 18:55:11] 2025-10-12 01:54:22,907 | INFO     | will attempt to kill all subprocesses of pid=4018121
[2025-10-11 18:55:11] 2025-10-12 01:54:23,411 | INFO     | process IDs to be killed: [4018121] (in reverse order)
[2025-10-11 18:55:11] 2025-10-12 01:54:23,593 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 18:55:11] 2025-10-12 01:54:23,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 18:55:11] 2025-10-12 01:54:23,616 | INFO     | did not find any defunct processes belonging to 4018121
[2025-10-11 18:55:11] 2025-10-12 01:54:23,626 | INFO     | did not find any defunct processes belonging to 4018121
[2025-10-11 18:55:11] 2025-10-12 01:54:23,626 | INFO     | ready for new job
[2025-10-11 18:55:11] 2025-10-12 01:54:23,626 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 18:55:11] 2025-10-12 01:54:23,627 | INFO     | ***************************************
[2025-10-11 18:55:11] 2025-10-12 01:54:23,628 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 18:55:11] 2025-10-12 01:54:23,628 | INFO     | ***************************************
[2025-10-11 18:55:11] 2025-10-12 01:54:23,628 | INFO     | 
[2025-10-11 18:55:11] 2025-10-12 01:54:23,631 | INFO     | architecture information:
[2025-10-11 18:55:11] 2025-10-12 01:54:23,632 | INFO     | executing command: cat /etc/os-release
[2025-10-11 18:55:11] 2025-10-12 01:54:23,652 | INFO     | cat /etc/os-release:
[2025-10-11 18:55:11] NAME="CentOS Linux"
[2025-10-11 18:55:11] VERSION="7 (Core)"
[2025-10-11 18:55:11] ID="centos"
[2025-10-11 18:55:11] ID_LIKE="rhel fedora"
[2025-10-11 18:55:11] VERSION_ID="7"
[2025-10-11 18:55:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 18:55:11] ANSI_COLOR="0;31"
[2025-10-11 18:55:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 18:55:11] HOME_URL="https://www.centos.org/"
[2025-10-11 18:55:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 18:55:11] 
[2025-10-11 18:55:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 18:55:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 18:55:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 18:55:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 18:55:11] 
[2025-10-11 18:55:11] 2025-10-12 01:54:23,652 | INFO     | ***************************************
[2025-10-11 18:55:11] 2025-10-12 01:54:24,156 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-11 18:55:11] 2025-10-12 01:54:24,206 | INFO     | sufficient remaining disk space (1247002230784 B)
[2025-10-11 18:55:11] 2025-10-12 01:54:24,207 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 18:55:11] 2025-10-12 01:54:24,207 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 18:55:11] 2025-10-12 01:54:24,208 | INFO     | update_server=False
[2025-10-11 18:55:11] 2025-10-12 01:54:24,208 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 18:55:11] 2025-10-12 01:54:24,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:55:11] 2025-10-12 01:54:24,208 | INFO     | aborting loop
[2025-10-11 18:55:11] 2025-10-12 01:54:24,416 | INFO     | all job control threads have been joined
[2025-10-11 18:55:11] 2025-10-12 01:54:24,753 | INFO     | all payload control threads have been joined
[2025-10-11 18:55:11] 2025-10-12 01:54:25,017 | INFO     | all data control threads have been joined
[2025-10-11 18:55:11] 2025-10-12 01:54:25,220 | INFO     | [job] retrieve thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:25,220 | INFO     | [job] job monitor thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:25,366 | INFO     | [payload] failed_post thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:25,426 | INFO     | [job] control thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:25,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 18:55:11] 2025-10-12 01:54:25,761 | INFO     | [payload] control thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:25,952 | INFO     | [job] validate thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:25,975 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 18:55:11] 2025-10-12 01:54:25,979 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:25,990 | INFO     | [data] copytool_in thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:26,022 | INFO     | [data] control thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:26,125 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:26,262 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:26,338 | INFO     | [payload] validate_post thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:26,583 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:26,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 18:55:11] 2025-10-12 01:54:27,627 | INFO     | [data] copytool_out thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:27,650 | INFO     | [job] queue monitor thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:29,988 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 18:55:11] 2025-10-12 01:54:54,402 | INFO     | PID=4005707 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 18:55:11] 2025-10-12 01:54:54,402 | INFO     | .. there are 26 such processes running
[2025-10-11 18:55:11] 2025-10-12 01:54:54,402 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 18:55:11] 2025-10-12 01:54:54,403 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 18:55:11] 2025-10-12 01:54:54,403 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 18:55:11] 2025-10-12 01:55:04,816 | INFO     | [monitor] cgroup control has ended
[2025-10-11 18:55:11] 2025-10-12 01:55:06,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562142689088)>', '<ExcThread(monitor, started 140561294014208)>']
[2025-10-11 18:55:11] 2025-10-12 01:55:06,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 18:55:11] 2025-10-12 01:55:06,487 | INFO     | [monitor] control thread has ended
[2025-10-11 18:55:11] 2025-10-12 01:55:11,161 | INFO     | all workflow threads have been joined
[2025-10-11 18:55:11] 2025-10-12 01:55:11,161 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 18:55:11] 2025-10-12 01:55:11,161 | INFO     | traces error code: 0
[2025-10-11 18:55:11] 2025-10-12 01:55:11,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 18:55:11] 2025-10-12 01:55:11,316 [wrapper] ==== pilot stdout END ====
[2025-10-11 18:55:11] 2025-10-12 01:55:11,322 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 18:55:11] 2025-10-12 01:55:11,354 [wrapper] pilotpid: 4005707
[2025-10-11 18:55:11] 2025-10-12 01:55:11,365 [wrapper] Pilot exit status: 0
[2025-10-11 18:55:11] 2025-10-12 01:55:11,418 [wrapper] pandaids: 6839162343
[2025-10-11 18:55:11] 2025-10-12 01:55:11,509 [wrapper] cleanup supervisor_pilot 4005715 4005708
[2025-10-11 18:55:11] 2025-10-12 01:55:11,521 [wrapper] Test setup, not cleaning
[2025-10-11 18:55:11] 2025-10-12 01:55:11,550 [wrapper] apfmon messages muted
[2025-10-11 18:55:11] 2025-10-12 01:55:11,555 [wrapper] ==== wrapper stdout END ====
[2025-10-11 18:55:11] 2025-10-12 01:55:11,562 [wrapper] ==== wrapper stderr END ====
[2025-10-11 18:55:11]  *** Error codes and diagnostics ***
[2025-10-11 18:55:11]     "exeErrorCode": 65,
[2025-10-11 18:55:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 18:55:11]     "pilotErrorCode": 1305,
[2025-10-11 18:55:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-11 18:55:11]  *** Listing of results directory ***
[2025-10-11 18:55:11] total 221056
[2025-10-11 18:55:11] -rw-r--r--. 1 boinc boinc    557409 Oct 11 16:21 pilot3.tar.gz
[2025-10-11 18:55:11] -rw-r--r--. 1 boinc boinc      5112 Oct 11 16:23 queuedata.json
[2025-10-11 18:55:11] -rwx------. 1 boinc boinc     36292 Oct 11 16:24 runpilot2-wrapper.sh
[2025-10-11 18:55:11] -rw-r--r--. 1 boinc boinc       100 Oct 11 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 18:55:11] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 18:49 run_atlas
[2025-10-11 18:55:11] -rw-r--r--. 1 boinc boinc       105 Oct 11 18:49 job.xml
[2025-10-11 18:55:11] -rw-r--r--. 1 boinc boinc      6444 Oct 11 18:49 init_data.xml
[2025-10-11 18:55:11] -rw-r--r--. 2 boinc boinc 222224736 Oct 11 18:49 EVNT.46676267._002708.pool.root.1
[2025-10-11 18:55:11] -rw-r--r--. 2 boinc boinc     15120 Oct 11 18:49 start_atlas.sh
[2025-10-11 18:55:11] drwxrwx--x. 2 boinc boinc      4096 Oct 11 18:49 shared
[2025-10-11 18:55:11] -rw-r--r--. 2 boinc boinc    569677 Oct 11 18:49 input.tar.gz
[2025-10-11 18:55:11] -rw-r--r--. 1 boinc boinc         0 Oct 11 18:49 boinc_lockfile
[2025-10-11 18:55:11] -rw-r--r--. 1 boinc boinc      2549 Oct 11 18:49 pandaJob.out
[2025-10-11 18:55:11] -rw-------. 1 boinc boinc    975496 Oct 11 18:50 agis_schedconf.cvmfs.json
[2025-10-11 18:55:11] -rw-------. 1 boinc boinc   1560580 Oct 11 18:50 agis_ddmendpoints.agis.ALL.json
[2025-10-11 18:55:11] drwx------. 5 boinc boinc      4096 Oct 11 18:50 pilot3
[2025-10-11 18:55:11] -rw-r--r--. 1 boinc boinc       525 Oct 11 18:51 boinc_task_state.xml
[2025-10-11 18:55:11] -rw-------. 1 boinc boinc       960 Oct 11 18:52 memory_monitor_summary.json
[2025-10-11 18:55:11] -rw-------. 1 boinc boinc     22649 Oct 11 18:52 log.46676269._066950.job.log.tgz.1
[2025-10-11 18:55:11] -rw-------. 1 boinc boinc        95 Oct 11 18:54 pilot_heartbeat.json
[2025-10-11 18:55:11] -rw-------. 1 boinc boinc      8371 Oct 11 18:54 heartbeat.json
[2025-10-11 18:55:11] -rw-r--r--. 1 boinc boinc      8192 Oct 11 18:55 boinc_mmap_file
[2025-10-11 18:55:11] -rw-r--r--. 1 boinc boinc        23 Oct 11 18:55 wrapper_checkpoint.txt
[2025-10-11 18:55:11] -rw-------. 1 boinc boinc      4823 Oct 11 18:55 pilotlog.txt
[2025-10-11 18:55:11] -rw-------. 1 boinc boinc     93355 Oct 11 18:55 log.46676269._066950.job.log.1
[2025-10-11 18:55:11] -rw-------. 1 boinc boinc       188 Oct 11 18:55 output.list
[2025-10-11 18:55:11] -rw-r--r--. 1 boinc boinc       620 Oct 11 18:55 runtime_log
[2025-10-11 18:55:11] -rw-------. 1 boinc boinc    133120 Oct 11 18:55 result.tar.gz
[2025-10-11 18:55:11] -rw-r--r--. 1 boinc boinc      8526 Oct 11 18:55 runtime_log.err
[2025-10-11 18:55:11] -rw-------. 1 boinc boinc       644 Oct 11 18:55 ipbLDmR8xR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOxhNDmR9wN6m.diag
[2025-10-11 18:55:11] -rw-r--r--. 1 boinc boinc     21809 Oct 11 18:55 stderr.txt
[2025-10-11 18:55:11] No HITS result produced
[2025-10-11 18:55:11]  *** Contents of shared directory: ***
[2025-10-11 18:55:11] total 217732
[2025-10-11 18:55:11] -rw-r--r--. 2 boinc boinc 222224736 Oct 11 18:49 ATLAS.root_0
[2025-10-11 18:55:11] -rw-r--r--. 2 boinc boinc     15120 Oct 11 18:49 start_atlas.sh
[2025-10-11 18:55:11] -rw-r--r--. 2 boinc boinc    569677 Oct 11 18:49 input.tar.gz
[2025-10-11 18:55:11] -rw-------. 1 boinc boinc    133120 Oct 11 18:55 result.tar.gz
18:55:13 (4001290): run_atlas exited; CPU time 28.484370
18:55:13 (4001290): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN