Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:45:44 (12327): wrapper (7.7.26015): starting
21:45:44 (12327): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:45:44] Arguments: --nthreads 8
[2025-10-11 21:45:44] Threads: 8
[2025-10-11 21:45:44] Checking for CVMFS
[2025-10-11 21:45:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:45:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:45:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:45:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:45:45] 2.11.2.0 1598 215560 127016 151602 0 57 19905909 20275200 917 130560 1 219982627 99.992 11680332 11158 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 21:45:45] CVMFS is ok
[2025-10-11 21:45:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:45:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:45:45] Further information can be found at the LHC@home message board.
[2025-10-11 21:45:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:45:45] Checking for apptainer binary...
[2025-10-11 21:45:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:45:45] Running /usr/bin/apptainer --version
[2025-10-11 21:45:45] apptainer version 1.3.2-1.el7
[2025-10-11 21:45:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:45:45] c-205-36.aglt2.org
[2025-10-11 21:45:45] apptainer works
[2025-10-11 21:45:45] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:45:45] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:45:46] Starting ATLAS job with PandaID=6838773118
[2025-10-11 21:45:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:53:10]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:53:10]  replicas=None
[2025-10-11 22:53:10]  scope=mc23_13p6TeV
[2025-10-11 22:53:10]  status=None
[2025-10-11 22:53:10]  status_code=0
[2025-10-11 22:53:10]  storage_token=
[2025-10-11 22:53:10]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6838773118/log.46676269._062548.job.log.tgz.1
[2025-10-11 22:53:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/7a/log.46676269._062548.job.log.tgz.1
[2025-10-11 22:53:10]  workdir=None
[2025-10-11 22:53:10] ]
[2025-10-11 22:53:10] 2025-10-12 02:52:21,452 | INFO     | transferring file log.46676269._062548.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6838773118/log.46676269._062548.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 22:53:10] 2025-10-12 02:52:21,452 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6838773118/log.46676269._062548.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._062548.job
[2025-10-11 22:53:10] 2025-10-12 02:52:21,471 | INFO     | adding to output.list: log.46676269._062548.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/7a/log.46676269._062548.job.log.tg
[2025-10-11 22:53:10] 2025-10-12 02:52:21,472 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 22:53:10] 2025-10-12 02:52:21,473 | INFO     | summary of transferred files:
[2025-10-11 22:53:10] 2025-10-12 02:52:21,473 | INFO     |  -- lfn=log.46676269._062548.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 22:53:10] 2025-10-12 02:52:21,473 | INFO     | stage-out finished correctly
[2025-10-11 22:53:10] 2025-10-12 02:52:21,555 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 22:53:10] 2025-10-12 02:52:22,220 | WARNING  | process 22389 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 22:53:10] 2025-10-12 02:52:22,220 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838773118/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 22:53:10] 2025-10-12 02:52:22,334 | INFO     | number of running child processes to parent process 22389: 1
[2025-10-11 22:53:10] 2025-10-12 02:52:22,335 | INFO     | maximum number of monitored processes: 6
[2025-10-11 22:53:10] 2025-10-12 02:52:22,364 | INFO     | job 6838773118 has state=finished
[2025-10-11 22:53:10] 2025-10-12 02:52:22,364 | INFO     | preparing for final server update for job 6838773118 in state='finished'
[2025-10-11 22:53:10] 2025-10-12 02:52:22,365 | INFO     | this job has now completed (state=finished)
[2025-10-11 22:53:10] 2025-10-12 02:52:22,365 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 22:53:10] 2025-10-12 02:52:22,365 | INFO     | log transfer has been attempted: DONE
[2025-10-11 22:53:10] 2025-10-12 02:52:22,365 | INFO     | job 6838773118 has finished - writing final server update
[2025-10-11 22:53:10] 2025-10-12 02:52:22,366 | INFO     | total number of processed events: 400 (read)
[2025-10-11 22:53:10] 2025-10-12 02:52:22,366 | INFO     | executing command: lscpu
[2025-10-11 22:53:10] 2025-10-12 02:52:22,400 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 22:53:10] 2025-10-12 02:52:23,214 | INFO     | time since job start (3985s) is within the limit (172800.0s)
[2025-10-11 22:53:10] 2025-10-12 02:52:24,837 | INFO     | monitor loop #296: job 0:6838773118 is in state 'finished'
[2025-10-11 22:53:10] 2025-10-12 02:52:24,838 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 22:53:10] 2025-10-12 02:52:25,219 | INFO     | time since job start (3987s) is within the limit (172800.0s)
[2025-10-11 22:53:10] 2025-10-12 02:52:26,364 | INFO     | PID=15991 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 22:53:10] 2025-10-12 02:52:26,364 | INFO     | .. there are 2 such processes running
[2025-10-11 22:53:10] 2025-10-12 02:52:26,657 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 22:53:10] 2025-10-12 02:52:26,661 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2013.4912500000003
[2025-10-11 22:53:10] 2025-10-12 02:52:26,664 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6838773118/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 22:53:10] 2025-10-12 02:52:26,665 | INFO     | extracted standard info from prmon json
[2025-10-11 22:53:10] 2025-10-12 02:52:26,665 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 22:53:10] 2025-10-12 02:52:26,665 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 22:53:10] 2025-10-12 02:52:26,666 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 22:53:10] 2025-10-12 02:52:26,666 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:53:10] 2025-10-12 02:52:26,668 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:53:10] 2025-10-12 02:52:26,668 | INFO     | sum of square deviations: 60482994.5
[2025-10-11 22:53:10] 2025-10-12 02:52:26,668 | INFO     | sum of deviations: -4981115491.000001
[2025-10-11 22:53:10] 2025-10-12 02:52:26,669 | INFO     | mean x: 1760235626.5
[2025-10-11 22:53:10] 2025-10-12 02:52:26,669 | INFO     | mean y: 2588384.724137931
[2025-10-11 22:53:10] 2025-10-12 02:52:26,669 | INFO     | -- intersect: 144967913257.474
[2025-10-11 22:53:10] 2025-10-12 02:52:26,669 | INFO     | intersect: 144967913257.474
[2025-10-11 22:53:10] 2025-10-12 02:52:26,669 | INFO     | chi2: 0.0512286190139429
[2025-10-11 22:53:10] 2025-10-12 02:52:26,669 | INFO     | -- intersect: 144967913257.474
[2025-10-11 22:53:10] 2025-10-12 02:52:26,670 | INFO     | current memory leak: -82.36 B/s (using 58 data points, chi2=0.05)
[2025-10-11 22:53:10] 2025-10-12 02:52:26,670 | INFO     | could have reported an average CPU frequency of 2231 MHz (6 samples)
[2025-10-11 22:53:10] 2025-10-12 02:52:26,670 | INFO     | ..............................
[2025-10-11 22:53:10] 2025-10-12 02:52:26,670 | INFO     | . Timing measurements:
[2025-10-11 22:53:10] 2025-10-12 02:52:26,670 | INFO     | . get job = 0 s
[2025-10-11 22:53:10] 2025-10-12 02:52:26,670 | INFO     | . initial setup = 2 s
[2025-10-11 22:53:10] 2025-10-12 02:52:26,670 | INFO     | . payload setup = 5 s
[2025-10-11 22:53:10] 2025-10-12 02:52:26,671 | INFO     | . stage-in = 0 s
[2025-10-11 22:53:10] 2025-10-12 02:52:26,671 | INFO     | . payload execution = 3956 s
[2025-10-11 22:53:10] 2025-10-12 02:52:26,671 | INFO     | . stage-out = 0 s
[2025-10-11 22:53:10] 2025-10-12 02:52:26,671 | INFO     | . log creation = 0 s
[2025-10-11 22:53:10] 2025-10-12 02:52:26,671 | INFO     | ..............................
[2025-10-11 22:53:10] 2025-10-12 02:52:26,749 | INFO     | 
[2025-10-11 22:53:10] 2025-10-12 02:52:26,749 | INFO     | job summary report
[2025-10-11 22:53:10] 2025-10-12 02:52:26,749 | INFO     | --------------------------------------------------
[2025-10-11 22:53:10] 2025-10-12 02:52:26,749 | INFO     | PanDA job id: 6838773118
[2025-10-11 22:53:10] 2025-10-12 02:52:26,750 | INFO     | task id: 46676269
[2025-10-11 22:53:10] 2025-10-12 02:52:26,750 | INFO     | errors: (none)
[2025-10-11 22:53:10] 2025-10-12 02:52:26,750 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:53:10] 2025-10-12 02:52:26,750 | INFO     | pilot state: finished 
[2025-10-11 22:53:10] 2025-10-12 02:52:26,750 | INFO     | transexitcode: 0
[2025-10-11 22:53:10] 2025-10-12 02:52:26,750 | INFO     | exeerrorcode: 0
[2025-10-11 22:53:10] 2025-10-12 02:52:26,750 | INFO     | exeerrordiag: 
[2025-10-11 22:53:10] 2025-10-12 02:52:26,750 | INFO     | exitcode: 0
[2025-10-11 22:53:10] 2025-10-12 02:52:26,751 | INFO     | exitmsg: OK
[2025-10-11 22:53:10] 2025-10-12 02:52:26,751 | INFO     | cpuconsumptiontime: 29227 s
[2025-10-11 22:53:10] 2025-10-12 02:52:26,751 | INFO     | nevents: 400
[2025-10-11 22:53:10] 2025-10-12 02:52:26,751 | INFO     | neventsw: 0
[2025-10-11 22:53:10] 2025-10-12 02:52:26,751 | INFO     | pid: 22389
[2025-10-11 22:53:10] 2025-10-12 02:52:26,751 | INFO     | pgrp: 22389
[2025-10-11 22:53:10] 2025-10-12 02:52:26,751 | INFO     | corecount: 8
[2025-10-11 22:53:10] 2025-10-12 02:52:26,751 | INFO     | event service: False
[2025-10-11 22:53:10] 2025-10-12 02:52:26,751 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 3965: 2375125, 3967: 2384179, 3973: 2384317}
[2025-10-11 22:53:10] 2025-10-12 02:52:26,751 | INFO     | --------------------------------------------------
[2025-10-11 22:53:10] 2025-10-12 02:52:26,752 | INFO     | 
[2025-10-11 22:53:10] 2025-10-12 02:52:26,752 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 22:53:10] 2025-10-12 02:52:26,776 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,776 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,777 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,777 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,777 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,777 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,777 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,777 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,777 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,777 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,777 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,778 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,778 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,778 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,778 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,778 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,778 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,778 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:53:10] 2025-10-12 02:52:26,778 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,778 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:53:10] 2025-10-12 02:52:26,779 | INFO     | job 6838773118 has completed (purged errors)
[2025-10-11 22:53:10] 2025-10-12 02:52:26,779 | INFO     | overall cleanup function is called
[2025-10-11 22:53:10] 2025-10-12 02:52:27,787 | INFO     | --- collectZombieJob: --- 10, [22389]
[2025-10-11 22:53:10] 2025-10-12 02:52:27,787 | INFO     | zombie collector waiting for pid 22389
[2025-10-11 22:53:10] 2025-10-12 02:52:27,787 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:53:10] 2025-10-12 02:52:27,787 | INFO     | collected zombie processes
[2025-10-11 22:53:10] 2025-10-12 02:52:27,788 | INFO     | will attempt to kill all subprocesses of pid=22389
[2025-10-11 22:53:10] 2025-10-12 02:52:27,901 | INFO     | process IDs to be killed: [22389] (in reverse order)
[2025-10-11 22:53:10] 2025-10-12 02:52:27,962 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:53:10] 2025-10-12 02:52:27,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:53:10] 2025-10-12 02:52:27,967 | INFO     | did not find any defunct processes belonging to 22389
[2025-10-11 22:53:10] 2025-10-12 02:52:27,971 | INFO     | did not find any defunct processes belonging to 22389
[2025-10-11 22:53:10] 2025-10-12 02:52:27,971 | INFO     | ready for new job
[2025-10-11 22:53:10] 2025-10-12 02:52:27,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:53:10] 2025-10-12 02:52:27,973 | INFO     | ***************************************
[2025-10-11 22:53:10] 2025-10-12 02:52:27,973 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:53:10] 2025-10-12 02:52:27,973 | INFO     | ***************************************
[2025-10-11 22:53:10] 2025-10-12 02:52:27,973 | INFO     | 
[2025-10-11 22:53:10] 2025-10-12 02:52:27,975 | INFO     | architecture information:
[2025-10-11 22:53:10] 2025-10-12 02:52:27,975 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:53:10] 2025-10-12 02:52:27,992 | INFO     | cat /etc/os-release:
[2025-10-11 22:53:10] NAME="CentOS Linux"
[2025-10-11 22:53:10] VERSION="7 (Core)"
[2025-10-11 22:53:10] ID="centos"
[2025-10-11 22:53:10] ID_LIKE="rhel fedora"
[2025-10-11 22:53:10] VERSION_ID="7"
[2025-10-11 22:53:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:53:10] ANSI_COLOR="0;31"
[2025-10-11 22:53:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:53:10] HOME_URL="https://www.centos.org/"
[2025-10-11 22:53:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:53:10] 
[2025-10-11 22:53:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:53:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:53:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:53:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:53:10] 
[2025-10-11 22:53:10] 2025-10-12 02:52:27,992 | INFO     | ***************************************
[2025-10-11 22:53:10] 2025-10-12 02:52:28,495 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 22:53:10] 2025-10-12 02:52:28,514 | INFO     | sufficient remaining disk space (32671531008 B)
[2025-10-11 22:53:10] 2025-10-12 02:52:28,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:53:10] 2025-10-12 02:52:28,515 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:53:10] 2025-10-12 02:52:28,515 | INFO     | update_server=False
[2025-10-11 22:53:10] 2025-10-12 02:52:28,515 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:53:10] 2025-10-12 02:52:28,515 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:53:10] 2025-10-12 02:52:28,516 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:53:10] 2025-10-12 02:52:28,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:53:10] 2025-10-12 02:52:28,516 | INFO     | aborting loop
[2025-10-11 22:53:10] 2025-10-12 02:52:28,828 | INFO     | all data control threads have been joined
[2025-10-11 22:53:10] 2025-10-12 02:52:28,968 | INFO     | all payload control threads have been joined
[2025-10-11 22:53:10] 2025-10-12 02:52:29,521 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:29,521 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:29,522 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:29,537 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:29,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:53:10] 2025-10-12 02:52:29,757 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:29,769 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:29,809 | INFO     | all job control threads have been joined
[2025-10-11 22:53:10] 2025-10-12 02:52:29,834 | INFO     | [data] control thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:29,972 | INFO     | [payload] control thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:30,250 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:30,427 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:30,570 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:30,790 | INFO     | [job] validate thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:30,814 | INFO     | [job] control thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:30,821 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:31,572 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:32,519 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:53:10] 2025-10-12 02:52:58,598 | INFO     | PID=15991 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 22:53:10] 2025-10-12 02:52:58,599 | INFO     | .. there are 2 such processes running
[2025-10-11 22:53:10] 2025-10-12 02:52:58,599 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:53:10] 2025-10-12 02:52:58,599 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:53:10] 2025-10-12 02:52:58,599 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:53:10] 2025-10-12 02:53:04,701 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:53:10] 2025-10-12 02:53:05,025 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140025954137920)>', '<ExcThread(monitor, started 140025387804416)>']
[2025-10-11 22:53:10] 2025-10-12 02:53:05,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:53:10] 2025-10-12 02:53:05,627 | INFO     | [monitor] control thread has ended
[2025-10-11 22:53:10] 2025-10-12 02:53:10,037 | INFO     | all workflow threads have been joined
[2025-10-11 22:53:10] 2025-10-12 02:53:10,037 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:53:10] 2025-10-12 02:53:10,038 | INFO     | traces error code: 0
[2025-10-11 22:53:10] 2025-10-12 02:53:10,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:53:10] 2025-10-12 02:53:10,151 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:53:10] 2025-10-12 02:53:10,155 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:53:10] 2025-10-12 02:53:10,158 [wrapper] pilotpid: 15991
[2025-10-11 22:53:10] 2025-10-12 02:53:10,161 [wrapper] Pilot exit status: 0
[2025-10-11 22:53:10] 2025-10-12 02:53:10,174 [wrapper] pandaids: 6838773118
[2025-10-11 22:53:10] 2025-10-12 02:53:10,202 [wrapper] cleanup supervisor_pilot  2388 15992
[2025-10-11 22:53:10] 2025-10-12 02:53:10,205 [wrapper] Test setup, not cleaning
[2025-10-11 22:53:10] 2025-10-12 02:53:10,209 [wrapper] apfmon messages muted
[2025-10-11 22:53:10] 2025-10-12 02:53:10,212 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:53:10] 2025-10-12 02:53:10,215 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:53:10]  *** Error codes and diagnostics ***
[2025-10-11 22:53:10]     "exeErrorCode": 0,
[2025-10-11 22:53:10]     "exeErrorDiag": "",
[2025-10-11 22:53:10]     "pilotErrorCode": 0,
[2025-10-11 22:53:10]     "pilotErrorDiag": "",
[2025-10-11 22:53:10]  *** Listing of results directory ***
[2025-10-11 22:53:10] total 418660
[2025-10-11 22:53:10] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 14:14 pilot3.tar.gz
[2025-10-11 22:53:10] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 14:21 queuedata.json
[2025-10-11 22:53:10] -rwx------ 1 boincer umatlas     36292 Oct 11 14:22 runpilot2-wrapper.sh
[2025-10-11 22:53:10] -rw-r--r-- 1 boincer umatlas       100 Oct 11 21:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:53:10] -rwxr-xr-x 1 boincer umatlas      7986 Oct 11 21:45 run_atlas
[2025-10-11 22:53:10] -rw-r--r-- 1 boincer umatlas       105 Oct 11 21:45 job.xml
[2025-10-11 22:53:10] -rw-r--r-- 2 boincer umatlas 225262344 Oct 11 21:45 EVNT.46676267._002512.pool.root.1
[2025-10-11 22:53:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 21:45 start_atlas.sh
[2025-10-11 22:53:10] drwxrwx--x 2 boincer umatlas      4096 Oct 11 21:45 shared
[2025-10-11 22:53:10] -rw-r--r-- 2 boincer umatlas    569684 Oct 11 21:45 input.tar.gz
[2025-10-11 22:53:10] -rw-r--r-- 1 boincer umatlas         0 Oct 11 21:45 boinc_lockfile
[2025-10-11 22:53:10] -rw-r--r-- 1 boincer umatlas      2550 Oct 11 21:45 pandaJob.out
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas    975496 Oct 11 21:45 agis_schedconf.cvmfs.json
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas   1560580 Oct 11 21:45 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:53:10] drwx------ 5 boincer umatlas      4096 Oct 11 21:45 pilot3
[2025-10-11 22:53:10] -rw-r--r-- 1 boincer umatlas      6135 Oct 11 22:47 init_data.xml
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas 197674597 Oct 11 22:51 HITS.46676269._062548.pool.root.1
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas      1046 Oct 11 22:52 memory_monitor_summary.json
[2025-10-11 22:53:10] -rw-r--r-- 1 boincer umatlas       529 Oct 11 22:52 boinc_task_state.xml
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas    332123 Oct 11 22:52 log.46676269._062548.job.log.tgz.1
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas      7841 Oct 11 22:52 heartbeat.json
[2025-10-11 22:53:10] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 22:52 boinc_mmap_file
[2025-10-11 22:53:10] -rw-r--r-- 1 boincer umatlas        27 Oct 11 22:52 wrapper_checkpoint.txt
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas        95 Oct 11 22:52 pilot_heartbeat.json
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas      4821 Oct 11 22:53 pilotlog.txt
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas    597692 Oct 11 22:53 log.46676269._062548.job.log.1
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas       357 Oct 11 22:53 output.list
[2025-10-11 22:53:10] -rw-r--r-- 1 boincer umatlas       620 Oct 11 22:53 runtime_log
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas    952320 Oct 11 22:53 result.tar.gz
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas       658 Oct 11 22:53 X3ANDmIQtR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm3LSMDmjqKFRm.diag
[2025-10-11 22:53:10] -rw-r--r-- 1 boincer umatlas      8703 Oct 11 22:53 runtime_log.err
[2025-10-11 22:53:10] -rw-r--r-- 1 boincer umatlas     21881 Oct 11 22:53 stderr.txt
[2025-10-11 22:53:10] HITS file was successfully produced:
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas 197674597 Oct 11 22:51 shared/HITS.pool.root.1
[2025-10-11 22:53:10]  *** Contents of shared directory: ***
[2025-10-11 22:53:10] total 414544
[2025-10-11 22:53:10] -rw-r--r-- 2 boincer umatlas 225262344 Oct 11 21:45 ATLAS.root_0
[2025-10-11 22:53:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 11 21:45 start_atlas.sh
[2025-10-11 22:53:10] -rw-r--r-- 2 boincer umatlas    569684 Oct 11 21:45 input.tar.gz
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas 197674597 Oct 11 22:51 HITS.pool.root.1
[2025-10-11 22:53:10] -rw------- 1 boincer umatlas    952320 Oct 11 22:53 result.tar.gz
22:53:11 (12327): run_atlas exited; CPU time 29231.581509
22:53:11 (12327): called boinc_finish(0)

</stderr_txt>
]]>

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