Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:35:43 (2507392): wrapper (7.7.26015): starting
21:35:43 (2507392): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:35:43] Arguments: --nthreads 8
[2025-10-11 21:35:43] Threads: 8
[2025-10-11 21:35:43] Checking for CVMFS
[2025-10-11 21:35:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:35:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:35:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:35:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:35:44] 2.13.2.0 4298 23698 224032 151602 1 193 23379775 32935936 4331 16776704 0 68171699 99.717 51557194 29847 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 21:35:44] CVMFS is ok
[2025-10-11 21:35:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:35:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:35:44] Further information can be found at the LHC@home message board.
[2025-10-11 21:35:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:35:44] Checking for apptainer binary...
[2025-10-11 21:35:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:35:44] Running /usr/bin/apptainer --version
[2025-10-11 21:35:44] apptainer version 1.4.3-1.el9
[2025-10-11 21:35:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:35:44] c-8-24.aglt2.org
[2025-10-11 21:35:44] apptainer works
[2025-10-11 21:35:44] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:35:44] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:35:44] Starting ATLAS job with PandaID=6838852491
[2025-10-11 21:35:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:17:18]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:17:18]  status=None
[2025-10-11 23:17:18]  status_code=0
[2025-10-11 23:17:18]  storage_token=
[2025-10-11 23:17:18]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6838852491/log.46676269._064273.job.log.tgz.1
[2025-10-11 23:17:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/25/log.46676269._064273.job.log.tgz.1
[2025-10-11 23:17:18]  workdir=None
[2025-10-11 23:17:18] ]
[2025-10-11 23:17:18] 2025-10-12 03:16:40,973 | INFO     | time since job start (6045s) is within the limit (172800.0s)
[2025-10-11 23:17:18] 2025-10-12 03:16:40,974 | INFO     | transferring file log.46676269._064273.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6838852491/log.46676269._064273.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 23:17:18] 2025-10-12 03:16:40,974 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6838852491/log.46676269._064273.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._064273.job
[2025-10-11 23:17:18] 2025-10-12 03:16:40,991 | INFO     | adding to output.list: log.46676269._064273.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fe/25/log.46676269._064273.job.log.tg
[2025-10-11 23:17:18] 2025-10-12 03:16:40,992 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 23:17:18] 2025-10-12 03:16:40,992 | INFO     | summary of transferred files:
[2025-10-11 23:17:18] 2025-10-12 03:16:40,992 | INFO     |  -- lfn=log.46676269._064273.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 23:17:18] 2025-10-12 03:16:40,993 | INFO     | stage-out finished correctly
[2025-10-11 23:17:18] 2025-10-12 03:16:41,098 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 23:17:18] 2025-10-12 03:16:42,560 | INFO     | job 6838852491 has state=finished
[2025-10-11 23:17:18] 2025-10-12 03:16:42,561 | INFO     | preparing for final server update for job 6838852491 in state='finished'
[2025-10-11 23:17:18] 2025-10-12 03:16:42,562 | INFO     | this job has now completed (state=finished)
[2025-10-11 23:17:18] 2025-10-12 03:16:42,562 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 23:17:18] 2025-10-12 03:16:42,562 | INFO     | log transfer has been attempted: DONE
[2025-10-11 23:17:18] 2025-10-12 03:16:42,562 | INFO     | job 6838852491 has finished - writing final server update
[2025-10-11 23:17:18] 2025-10-12 03:16:42,562 | INFO     | total number of processed events: 400 (read)
[2025-10-11 23:17:18] 2025-10-12 03:16:42,563 | INFO     | executing command: lscpu
[2025-10-11 23:17:18] 2025-10-12 03:16:42,614 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 23:17:18] 2025-10-12 03:16:42,980 | INFO     | time since job start (6047s) is within the limit (172800.0s)
[2025-10-11 23:17:18] 2025-10-12 03:16:43,214 | WARNING  | process 2517922 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 23:17:18] 2025-10-12 03:16:43,214 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6838852491/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:17:18] 2025-10-12 03:16:43,476 | INFO     | number of running child processes to parent process 2517922: 1
[2025-10-11 23:17:18] 2025-10-12 03:16:43,476 | INFO     | maximum number of monitored processes: 6
[2025-10-11 23:17:18] 2025-10-12 03:16:44,986 | INFO     | time since job start (6049s) is within the limit (172800.0s)
[2025-10-11 23:17:18] 2025-10-12 03:16:45,979 | INFO     | monitor loop #448: job 0:6838852491 is in state 'finished'
[2025-10-11 23:17:18] 2025-10-12 03:16:45,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:17:18] 2025-10-12 03:16:46,114 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 23:17:18] 2025-10-12 03:16:46,121 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2700.1457249999994
[2025-10-11 23:17:18] 2025-10-12 03:16:46,128 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6838852491/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:17:18] 2025-10-12 03:16:46,129 | INFO     | extracted standard info from prmon json
[2025-10-11 23:17:18] 2025-10-12 03:16:46,129 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:17:18] 2025-10-12 03:16:46,129 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:17:18] 2025-10-12 03:16:46,130 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:17:18] 2025-10-12 03:16:46,130 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:17:18] 2025-10-12 03:16:46,132 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:17:18] 2025-10-12 03:16:46,133 | INFO     | sum of square deviations: 241429643.0
[2025-10-11 23:17:18] 2025-10-12 03:16:46,133 | INFO     | sum of deviations: -8182753042.500001
[2025-10-11 23:17:18] 2025-10-12 03:16:46,133 | INFO     | mean x: 1760236059.5
[2025-10-11 23:17:18] 2025-10-12 03:16:46,133 | INFO     | mean y: 2225650.2717391304
[2025-10-11 23:17:18] 2025-10-12 03:16:46,134 | INFO     | -- intersect: 59661747125.81746
[2025-10-11 23:17:18] 2025-10-12 03:16:46,134 | INFO     | intersect: 59661747125.81746
[2025-10-11 23:17:18] 2025-10-12 03:16:46,134 | INFO     | chi2: 0.07048455936898758
[2025-10-11 23:17:18] 2025-10-12 03:16:46,134 | INFO     | -- intersect: 59661747125.81746
[2025-10-11 23:17:18] 2025-10-12 03:16:46,134 | INFO     | current memory leak: -33.89 B/s (using 92 data points, chi2=0.07)
[2025-10-11 23:17:18] 2025-10-12 03:16:46,135 | INFO     | could have reported an average CPU frequency of 2685 MHz (7 samples)
[2025-10-11 23:17:18] 2025-10-12 03:16:46,135 | INFO     | ..............................
[2025-10-11 23:17:18] 2025-10-12 03:16:46,135 | INFO     | . Timing measurements:
[2025-10-11 23:17:18] 2025-10-12 03:16:46,135 | INFO     | . get job = 0 s
[2025-10-11 23:17:18] 2025-10-12 03:16:46,135 | INFO     | . initial setup = 2 s
[2025-10-11 23:17:18] 2025-10-12 03:16:46,135 | INFO     | . payload setup = 4 s
[2025-10-11 23:17:18] 2025-10-12 03:16:46,136 | INFO     | . stage-in = 0 s
[2025-10-11 23:17:18] 2025-10-12 03:16:46,136 | INFO     | . payload execution = 6021 s
[2025-10-11 23:17:18] 2025-10-12 03:16:46,136 | INFO     | . stage-out = 0 s
[2025-10-11 23:17:18] 2025-10-12 03:16:46,136 | INFO     | . log creation = 0 s
[2025-10-11 23:17:18] 2025-10-12 03:16:46,136 | INFO     | ..............................
[2025-10-11 23:17:18] 2025-10-12 03:16:46,250 | INFO     | 
[2025-10-11 23:17:18] 2025-10-12 03:16:46,250 | INFO     | job summary report
[2025-10-11 23:17:18] 2025-10-12 03:16:46,250 | INFO     | --------------------------------------------------
[2025-10-11 23:17:18] 2025-10-12 03:16:46,250 | INFO     | PanDA job id: 6838852491
[2025-10-11 23:17:18] 2025-10-12 03:16:46,250 | INFO     | task id: 46676269
[2025-10-11 23:17:18] 2025-10-12 03:16:46,251 | INFO     | errors: (none)
[2025-10-11 23:17:18] 2025-10-12 03:16:46,251 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:17:18] 2025-10-12 03:16:46,251 | INFO     | pilot state: finished 
[2025-10-11 23:17:18] 2025-10-12 03:16:46,251 | INFO     | transexitcode: 0
[2025-10-11 23:17:18] 2025-10-12 03:16:46,251 | INFO     | exeerrorcode: 0
[2025-10-11 23:17:18] 2025-10-12 03:16:46,251 | INFO     | exeerrordiag: 
[2025-10-11 23:17:18] 2025-10-12 03:16:46,251 | INFO     | exitcode: 0
[2025-10-11 23:17:18] 2025-10-12 03:16:46,251 | INFO     | exitmsg: OK
[2025-10-11 23:17:18] 2025-10-12 03:16:46,251 | INFO     | cpuconsumptiontime: 43076 s
[2025-10-11 23:17:18] 2025-10-12 03:16:46,252 | INFO     | nevents: 400
[2025-10-11 23:17:18] 2025-10-12 03:16:46,252 | INFO     | neventsw: 0
[2025-10-11 23:17:18] 2025-10-12 03:16:46,252 | INFO     | pid: 2517922
[2025-10-11 23:17:18] 2025-10-12 03:16:46,252 | INFO     | pgrp: 2517922
[2025-10-11 23:17:18] 2025-10-12 03:16:46,252 | INFO     | corecount: 8
[2025-10-11 23:17:18] 2025-10-12 03:16:46,252 | INFO     | event service: False
[2025-10-11 23:17:18] 2025-10-12 03:16:46,252 | INFO     | sizes: {0: 2348685, 1: 2348884, 4: 2349146, 11: 2349174, 6029: 2376017, 6030: 2376016, 6031: 2385254, 6036: 2385392}
[2025-10-11 23:17:18] 2025-10-12 03:16:46,252 | INFO     | --------------------------------------------------
[2025-10-11 23:17:18] 2025-10-12 03:16:46,252 | INFO     | 
[2025-10-11 23:17:18] 2025-10-12 03:16:46,253 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-11 23:17:18] 2025-10-12 03:16:46,269 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,270 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,270 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,270 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,271 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,271 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,271 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,271 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,271 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,271 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,271 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,272 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,272 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,272 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:17:18] 2025-10-12 03:16:46,272 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,272 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:17:18] 2025-10-12 03:16:46,272 | INFO     | job 6838852491 has completed (purged errors)
[2025-10-11 23:17:18] 2025-10-12 03:16:46,273 | INFO     | overall cleanup function is called
[2025-10-11 23:17:18] 2025-10-12 03:16:47,282 | INFO     | --- collectZombieJob: --- 10, [2517922]
[2025-10-11 23:17:18] 2025-10-12 03:16:47,282 | INFO     | zombie collector waiting for pid 2517922
[2025-10-11 23:17:18] 2025-10-12 03:16:47,282 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:17:18] 2025-10-12 03:16:47,282 | INFO     | collected zombie processes
[2025-10-11 23:17:18] 2025-10-12 03:16:47,282 | INFO     | will attempt to kill all subprocesses of pid=2517922
[2025-10-11 23:17:18] 2025-10-12 03:16:47,550 | INFO     | process IDs to be killed: [2517922] (in reverse order)
[2025-10-11 23:17:18] 2025-10-12 03:16:47,620 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:17:18] 2025-10-12 03:16:47,621 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:17:18] 2025-10-12 03:16:47,629 | INFO     | did not find any defunct processes belonging to 2517922
[2025-10-11 23:17:18] 2025-10-12 03:16:47,635 | INFO     | did not find any defunct processes belonging to 2517922
[2025-10-11 23:17:18] 2025-10-12 03:16:47,635 | INFO     | ready for new job
[2025-10-11 23:17:18] 2025-10-12 03:16:47,636 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:17:18] 2025-10-12 03:16:47,637 | INFO     | ***************************************
[2025-10-11 23:17:18] 2025-10-12 03:16:47,638 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:17:18] 2025-10-12 03:16:47,638 | INFO     | ***************************************
[2025-10-11 23:17:18] 2025-10-12 03:16:47,638 | INFO     | 
[2025-10-11 23:17:18] 2025-10-12 03:16:47,651 | INFO     | architecture information:
[2025-10-11 23:17:18] 2025-10-12 03:16:47,652 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:17:18] 2025-10-12 03:16:47,667 | INFO     | cat /etc/os-release:
[2025-10-11 23:17:18] NAME="CentOS Linux"
[2025-10-11 23:17:18] VERSION="7 (Core)"
[2025-10-11 23:17:18] ID="centos"
[2025-10-11 23:17:18] ID_LIKE="rhel fedora"
[2025-10-11 23:17:18] VERSION_ID="7"
[2025-10-11 23:17:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:17:18] ANSI_COLOR="0;31"
[2025-10-11 23:17:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:17:18] HOME_URL="https://www.centos.org/"
[2025-10-11 23:17:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:17:18] 
[2025-10-11 23:17:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:17:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:17:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:17:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:17:18] 
[2025-10-11 23:17:18] 2025-10-12 03:16:47,667 | INFO     | ***************************************
[2025-10-11 23:17:18] 2025-10-12 03:16:48,170 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-11 23:17:18] 2025-10-12 03:16:48,184 | INFO     | sufficient remaining disk space (74402758656 B)
[2025-10-11 23:17:18] 2025-10-12 03:16:48,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:17:18] 2025-10-12 03:16:48,185 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:17:18] 2025-10-12 03:16:48,185 | INFO     | update_server=False
[2025-10-11 23:17:18] 2025-10-12 03:16:48,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:17:18] 2025-10-12 03:16:48,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:17:18] 2025-10-12 03:16:48,186 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:17:18] 2025-10-12 03:16:48,482 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 23:17:18] 2025-10-12 03:16:48,482 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 23:17:18] 2025-10-12 03:16:48,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:17:18] 2025-10-12 03:16:48,482 | INFO     | will abort loop
[2025-10-11 23:17:18] 2025-10-12 03:16:48,519 | INFO     | all payload control threads have been joined
[2025-10-11 23:17:18] 2025-10-12 03:16:48,694 | INFO     | all job control threads have been joined
[2025-10-11 23:17:18] 2025-10-12 03:16:48,786 | INFO     | all data control threads have been joined
[2025-10-11 23:17:18] 2025-10-12 03:16:49,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:17:18] 2025-10-12 03:16:49,190 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:49,191 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:49,474 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:49,487 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:49,513 | INFO     | [job] validate thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:49,525 | INFO     | [payload] control thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:49,555 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:49,700 | INFO     | [job] control thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:49,784 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:49,792 | INFO     | [data] control thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:49,936 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:50,396 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:50,465 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:51,114 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:52,190 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:16:58,323 | INFO     | job.realtimelogging is not enabled
[2025-10-11 23:17:18] 2025-10-12 03:16:59,328 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:17:18] 2025-10-12 03:17:04,336 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:17:18] 2025-10-12 03:17:04,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110556784448)>', '<ExcThread(monitor, started 140109919794944)>']
[2025-10-11 23:17:18] 2025-10-12 03:17:09,687 | INFO     | all workflow threads have been joined
[2025-10-11 23:17:18] 2025-10-12 03:17:09,687 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:17:18] 2025-10-12 03:17:09,688 | INFO     | traces error code: 0
[2025-10-11 23:17:18] 2025-10-12 03:17:09,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:17:18] 2025-10-12 03:17:18,400 | INFO     | PID=2511053 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 23:17:18] 2025-10-12 03:17:18,400 | INFO     | .. there are 6 such processes running
[2025-10-11 23:17:18] 2025-10-12 03:17:18,402 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:17:18] 2025-10-12 03:17:18,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:17:18] 2025-10-12 03:17:18,402 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:17:18] 2025-10-12 03:17:18,402 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:17:18] 2025-10-12 03:17:18,402 | INFO     | [monitor] control thread has ended
[2025-10-11 23:17:18] 2025-10-12 03:17:18,527 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:17:18] 2025-10-12 03:17:18,529 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:17:18] 2025-10-12 03:17:18,531 [wrapper] pilotpid: 2511053
[2025-10-11 23:17:18] 2025-10-12 03:17:18,533 [wrapper] Pilot exit status: 0
[2025-10-11 23:17:18] 2025-10-12 03:17:18,542 [wrapper] pandaids: 6838852491
[2025-10-11 23:17:18] 2025-10-12 03:17:18,590 [wrapper] cleanup supervisor_pilot 2736737 2511054
[2025-10-11 23:17:18] 2025-10-12 03:17:18,593 [wrapper] Test setup, not cleaning
[2025-10-11 23:17:18] 2025-10-12 03:17:18,595 [wrapper] apfmon messages muted
[2025-10-11 23:17:18] 2025-10-12 03:17:18,598 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:17:18] 2025-10-12 03:17:18,600 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:17:18]  *** Error codes and diagnostics ***
[2025-10-11 23:17:18]     "exeErrorCode": 0,
[2025-10-11 23:17:18]     "exeErrorDiag": "",
[2025-10-11 23:17:18]     "pilotErrorCode": 0,
[2025-10-11 23:17:18]     "pilotErrorDiag": "",
[2025-10-11 23:17:18]  *** Listing of results directory ***
[2025-10-11 23:17:18] total 410844
[2025-10-11 23:17:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 16:21 pilot3.tar.gz
[2025-10-11 23:17:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 16:29 queuedata.json
[2025-10-11 23:17:18] -rwx------. 1 boincer umatlas     36292 Oct 11 16:29 runpilot2-wrapper.sh
[2025-10-11 23:17:18] -rw-r--r--. 1 boincer umatlas       100 Oct 11 21:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:17:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 21:35 run_atlas
[2025-10-11 23:17:18] -rw-r--r--. 1 boincer umatlas       105 Oct 11 21:35 job.xml
[2025-10-11 23:17:18] -rw-r--r--. 2 boincer umatlas 222041161 Oct 11 21:35 EVNT.46676267._002583.pool.root.1
[2025-10-11 23:17:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:35 start_atlas.sh
[2025-10-11 23:17:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 21:35 shared
[2025-10-11 23:17:18] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 21:35 input.tar.gz
[2025-10-11 23:17:18] -rw-r--r--. 1 boincer umatlas         0 Oct 11 21:35 boinc_lockfile
[2025-10-11 23:17:18] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 21:35 pandaJob.out
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas    975496 Oct 11 21:35 agis_schedconf.cvmfs.json
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas   1560580 Oct 11 21:35 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:17:18] drwx------. 5 boincer umatlas      4096 Oct 11 21:35 pilot3
[2025-10-11 23:17:18] -rw-r--r--. 1 boincer umatlas      6660 Oct 11 23:10 init_data.xml
[2025-10-11 23:17:18] -rw-r--r--. 1 boincer umatlas       529 Oct 11 23:16 boinc_task_state.xml
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas 192300193 Oct 11 23:16 HITS.46676269._064273.pool.root.1
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas      1035 Oct 11 23:16 memory_monitor_summary.json
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas    353406 Oct 11 23:16 log.46676269._064273.job.log.tgz.1
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas      7815 Oct 11 23:16 heartbeat.json
[2025-10-11 23:17:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 23:17 boinc_mmap_file
[2025-10-11 23:17:18] -rw-r--r--. 1 boincer umatlas        27 Oct 11 23:17 wrapper_checkpoint.txt
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas        95 Oct 11 23:17 pilot_heartbeat.json
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas       822 Oct 11 23:17 pilotlog.txt
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas    880579 Oct 11 23:17 log.46676269._064273.job.log.1
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas       357 Oct 11 23:17 output.list
[2025-10-11 23:17:18] -rw-r--r--. 1 boincer umatlas       620 Oct 11 23:17 runtime_log
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas   1249280 Oct 11 23:17 result.tar.gz
[2025-10-11 23:17:18] -rw-r--r--. 1 boincer umatlas      8693 Oct 11 23:17 runtime_log.err
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas       650 Oct 11 23:17 h0sMDmlOvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJWhNDm1zG20m.diag
[2025-10-11 23:17:18] -rw-r--r--. 1 boincer umatlas     21992 Oct 11 23:17 stderr.txt
[2025-10-11 23:17:18] HITS file was successfully produced:
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas 192300193 Oct 11 23:16 shared/HITS.pool.root.1
[2025-10-11 23:17:18]  *** Contents of shared directory: ***
[2025-10-11 23:17:18] total 406436
[2025-10-11 23:17:18] -rw-r--r--. 2 boincer umatlas 222041161 Oct 11 21:35 ATLAS.root_0
[2025-10-11 23:17:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:35 start_atlas.sh
[2025-10-11 23:17:18] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 21:35 input.tar.gz
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas 192300193 Oct 11 23:16 HITS.pool.root.1
[2025-10-11 23:17:18] -rw-------. 1 boincer umatlas   1249280 Oct 11 23:17 result.tar.gz
23:17:19 (2507392): run_atlas exited; CPU time 43205.063928
23:17:19 (2507392): called boinc_finish(0)

</stderr_txt>
]]>

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