Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:14 (592555): wrapper (7.7.26015): starting
00:03:14 (592555): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:03:14] Arguments: --nthreads 9
[2025-10-12 00:03:14] Threads: 9
[2025-10-12 00:03:14] Checking for CVMFS
[2025-10-12 00:03:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:03:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:03:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:03:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:03:17] 2.13.2.0 403710 10756 215360 151606 3 413 19584086 32935937 31598 16776704 0 29389163 99.700 22902813 27898 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:03:17] CVMFS is ok
[2025-10-12 00:03:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:03:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:03:17] Further information can be found at the LHC@home message board.
[2025-10-12 00:03:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:03:17] Checking for apptainer binary...
[2025-10-12 00:03:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:03:17] Running /usr/bin/apptainer --version
[2025-10-12 00:03:18] apptainer version 1.4.3-1.el9
[2025-10-12 00:03:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:03:19] c-4-40.aglt2.org
[2025-10-12 00:03:19] apptainer works
[2025-10-12 00:03:19] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:03:19] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:03:20] Starting ATLAS job with PandaID=6839083871
[2025-10-12 00:03:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 17:02:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 17:02:22] 2025-10-12 21:01:12,233 | INFO     | time since job start (61011s) is within the limit (172800.0s)
[2025-10-12 17:02:22] 2025-10-12 21:01:12,330 | INFO     | monitor loop #3510: job 0:6839083871 is in state 'finished'
[2025-10-12 17:02:22] 2025-10-12 21:01:12,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 17:02:22] 2025-10-12 21:01:12,379 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 17:02:22] 2025-10-12 21:01:12,389 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8770499999982
[2025-10-12 17:02:22] 2025-10-12 21:01:12,396 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6839083871/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 17:02:22] 2025-10-12 21:01:12,397 | INFO     | extracted standard info from prmon json
[2025-10-12 17:02:22] 2025-10-12 21:01:12,397 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 17:02:22] 2025-10-12 21:01:12,397 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 17:02:22] 2025-10-12 21:01:12,398 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 17:02:22] 2025-10-12 21:01:12,398 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 17:02:22] 2025-10-12 21:01:12,430 | INFO     | fitting pss+swap vs Time
[2025-10-12 17:02:22] 2025-10-12 21:01:12,435 | INFO     | sum of square deviations: 308202837978.2296
[2025-10-12 17:02:22] 2025-10-12 21:01:12,462 | INFO     | sum of deviations: 1841291723650.8865
[2025-10-12 17:02:22] 2025-10-12 21:01:12,463 | INFO     | mean x: 1760272415.0691383
[2025-10-12 17:02:22] 2025-10-12 21:01:12,463 | INFO     | mean y: 2133358.639278557
[2025-10-12 17:02:22] 2025-10-12 21:01:12,463 | INFO     | -- intersect: -10514236479.157957
[2025-10-12 17:02:22] 2025-10-12 21:01:12,463 | INFO     | intersect: -10514236479.157957
[2025-10-12 17:02:22] 2025-10-12 21:01:12,465 | INFO     | chi2: 11.62467912414467
[2025-10-12 17:02:22] 2025-10-12 21:01:12,466 | INFO     | sum of square deviations: 303593824518.3561
[2025-10-12 17:02:22] 2025-10-12 21:01:12,504 | INFO     | sum of deviations: 1891613606382.1147
[2025-10-12 17:02:22] 2025-10-12 21:01:12,504 | INFO     | mean x: 1760272262.5770392
[2025-10-12 17:02:22] 2025-10-12 21:01:12,504 | INFO     | mean y: 2135015.952668681
[2025-10-12 17:02:22] 2025-10-12 21:01:12,504 | INFO     | -- intersect: -10965660419.643988
[2025-10-12 17:02:22] 2025-10-12 21:01:12,504 | INFO     | intersect: -10965660419.643988
[2025-10-12 17:02:22] 2025-10-12 21:01:12,510 | INFO     | chi2: 10.850759084962336
[2025-10-12 17:02:22] 2025-10-12 21:01:12,510 | INFO     | current chi2=10.850759084962336 (change=6.657560444613806 %)
[2025-10-12 17:02:22] 2025-10-12 21:01:12,510 | INFO     | right removable region: 992
[2025-10-12 17:02:22] 2025-10-12 21:01:12,512 | INFO     | sum of square deviations: 303592869258.3562
[2025-10-12 17:02:22] 2025-10-12 21:01:12,590 | INFO     | sum of deviations: 1571841721655.8394
[2025-10-12 17:02:22] 2025-10-12 21:01:12,591 | INFO     | mean x: 1760272567.5770392
[2025-10-12 17:02:22] 2025-10-12 21:01:12,591 | INFO     | mean y: 2142269.721047331
[2025-10-12 17:02:22] 2025-10-12 21:01:12,591 | INFO     | -- intersect: -9111608886.43422
[2025-10-12 17:02:22] 2025-10-12 21:01:12,591 | INFO     | intersect: -9111608886.43422
[2025-10-12 17:02:22] 2025-10-12 21:01:12,593 | INFO     | chi2: 8.06031614805196
[2025-10-12 17:02:22] 2025-10-12 21:01:12,593 | INFO     | current chi2=8.06031614805196 (change=30.66203323143314 %)
[2025-10-12 17:02:22] 2025-10-12 21:01:12,594 | INFO     | sum of square deviations: 299029148270.02734
[2025-10-12 17:02:22] 2025-10-12 21:01:12,647 | INFO     | sum of deviations: 1365918196365.5364
[2025-10-12 17:02:22] 2025-10-12 21:01:12,647 | INFO     | mean x: 1760272720.084008
[2025-10-12 17:02:22] 2025-10-12 21:01:12,647 | INFO     | mean y: 2149150.5718623484
[2025-10-12 17:02:22] 2025-10-12 21:01:12,647 | INFO     | -- intersect: -8038500240.428006
[2025-10-12 17:02:22] 2025-10-12 21:01:12,647 | INFO     | intersect: -8038500240.428006
[2025-10-12 17:02:22] 2025-10-12 21:01:12,653 | INFO     | chi2: 6.121995339695351
[2025-10-12 17:02:22] 2025-10-12 21:01:12,653 | INFO     | current chi2=6.121995339695351 (change=24.047702010113685 %)
[2025-10-12 17:02:22] 2025-10-12 21:01:12,653 | INFO     | left removable region: 20
[2025-10-12 17:02:22] 2025-10-12 21:01:12,655 | INFO     | sum of square deviations: 284733979281.6562
[2025-10-12 17:02:22] 2025-10-12 21:01:12,763 | INFO     | sum of deviations: 1153958058153.3396
[2025-10-12 17:02:22] 2025-10-12 21:01:12,763 | INFO     | mean x: 1760272842.1080246
[2025-10-12 17:02:22] 2025-10-12 21:01:12,763 | INFO     | mean y: 2159628.1872427985
[2025-10-12 17:02:22] 2025-10-12 21:01:12,763 | INFO     | -- intersect: -7131801115.885778
[2025-10-12 17:02:22] 2025-10-12 21:01:12,763 | INFO     | intersect: -7131801115.885778
[2025-10-12 17:02:22] 2025-10-12 21:01:12,764 | INFO     | chi2: 3.859447225463962
[2025-10-12 17:02:22] 2025-10-12 21:01:12,765 | INFO     | -- intersect: -7131801115.885778
[2025-10-12 17:02:22] 2025-10-12 21:01:12,765 | INFO     | current memory leak: 4.05 B/s (using 972 data points, chi2=3.86)
[2025-10-12 17:02:22] 2025-10-12 21:01:12,766 | INFO     | could have reported an average CPU frequency of 2599 MHz (36 samples)
[2025-10-12 17:02:22] 2025-10-12 21:01:12,770 | INFO     | ..............................
[2025-10-12 17:02:22] 2025-10-12 21:01:12,770 | INFO     | . Timing measurements:
[2025-10-12 17:02:22] 2025-10-12 21:01:12,770 | INFO     | . get job = 0 s
[2025-10-12 17:02:22] 2025-10-12 21:01:12,770 | INFO     | . initial setup = 4 s
[2025-10-12 17:02:22] 2025-10-12 21:01:12,771 | INFO     | . payload setup = 41 s
[2025-10-12 17:02:22] 2025-10-12 21:01:12,771 | INFO     | . stage-in = 0 s
[2025-10-12 17:02:22] 2025-10-12 21:01:12,771 | INFO     | . payload execution = 60866 s
[2025-10-12 17:02:22] 2025-10-12 21:01:12,771 | INFO     | . stage-out = 6 s
[2025-10-12 17:02:22] 2025-10-12 21:01:12,771 | INFO     | . log creation = 1 s
[2025-10-12 17:02:22] 2025-10-12 21:01:12,771 | INFO     | ..............................
[2025-10-12 17:02:22] 2025-10-12 21:01:14,097 | INFO     | 
[2025-10-12 17:02:22] 2025-10-12 21:01:14,097 | INFO     | job summary report
[2025-10-12 17:02:22] 2025-10-12 21:01:14,098 | INFO     | --------------------------------------------------
[2025-10-12 17:02:22] 2025-10-12 21:01:14,099 | INFO     | PanDA job id: 6839083871
[2025-10-12 17:02:22] 2025-10-12 21:01:14,100 | INFO     | task id: 46676269
[2025-10-12 17:02:22] 2025-10-12 21:01:14,100 | INFO     | errors: (none)
[2025-10-12 17:02:22] 2025-10-12 21:01:14,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 17:02:22] 2025-10-12 21:01:14,100 | INFO     | pilot state: finished 
[2025-10-12 17:02:22] 2025-10-12 21:01:14,101 | INFO     | transexitcode: 0
[2025-10-12 17:02:22] 2025-10-12 21:01:14,101 | INFO     | exeerrorcode: 0
[2025-10-12 17:02:22] 2025-10-12 21:01:14,131 | INFO     | exeerrordiag: 
[2025-10-12 17:02:22] 2025-10-12 21:01:14,131 | INFO     | exitcode: 0
[2025-10-12 17:02:22] 2025-10-12 21:01:14,131 | INFO     | exitmsg: OK
[2025-10-12 17:02:22] 2025-10-12 21:01:14,131 | INFO     | cpuconsumptiontime: 51113 s
[2025-10-12 17:02:22] 2025-10-12 21:01:14,131 | INFO     | nevents: 400
[2025-10-12 17:02:22] 2025-10-12 21:01:14,132 | INFO     | neventsw: 0
[2025-10-12 17:02:22] 2025-10-12 21:01:14,132 | INFO     | pid: 623896
[2025-10-12 17:02:22] 2025-10-12 21:01:14,132 | INFO     | pgrp: 623896
[2025-10-12 17:02:22] 2025-10-12 21:01:14,132 | INFO     | corecount: 9
[2025-10-12 17:02:22] 2025-10-12 21:01:14,132 | INFO     | event service: False
[2025-10-12 17:02:22] 2025-10-12 21:01:14,132 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 3: 2348913, 14: 2348941, 25: 2348969, 33: 2349387, 36: 2349443, 60911: 2401353, 60912: 2401352, 60920: 2410406, 60924: 
[2025-10-12 17:02:22] 2025-10-12 21:01:14,132 | INFO     | --------------------------------------------------
[2025-10-12 17:02:22] 2025-10-12 21:01:14,132 | INFO     | 
[2025-10-12 17:02:22] 2025-10-12 21:01:14,133 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 17:02:22] 2025-10-12 21:01:14,234 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,235 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,235 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,235 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,235 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,235 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,235 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,236 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 17:02:22] 2025-10-12 21:01:14,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,236 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 17:02:22] 2025-10-12 21:01:14,237 | INFO     | job 6839083871 has completed (purged errors)
[2025-10-12 17:02:22] 2025-10-12 21:01:14,237 | INFO     | overall cleanup function is called
[2025-10-12 17:02:22] 2025-10-12 21:01:15,251 | INFO     | --- collectZombieJob: --- 10, [623896]
[2025-10-12 17:02:22] 2025-10-12 21:01:15,251 | INFO     | zombie collector waiting for pid 623896
[2025-10-12 17:02:22] 2025-10-12 21:01:15,251 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 17:02:22] 2025-10-12 21:01:15,251 | INFO     | collected zombie processes
[2025-10-12 17:02:22] 2025-10-12 21:01:15,252 | INFO     | will attempt to kill all subprocesses of pid=623896
[2025-10-12 17:02:22] 2025-10-12 21:01:16,704 | INFO     | process IDs to be killed: [623896] (in reverse order)
[2025-10-12 17:02:22] 2025-10-12 21:01:17,476 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 17:02:22] 2025-10-12 21:01:17,477 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 17:02:22] 2025-10-12 21:01:17,536 | INFO     | did not find any defunct processes belonging to 623896
[2025-10-12 17:02:22] 2025-10-12 21:01:17,596 | INFO     | did not find any defunct processes belonging to 623896
[2025-10-12 17:02:22] 2025-10-12 21:01:17,600 | INFO     | ready for new job
[2025-10-12 17:02:22] 2025-10-12 21:01:17,600 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 17:02:22] 2025-10-12 21:01:17,613 | INFO     | ***************************************
[2025-10-12 17:02:22] 2025-10-12 21:01:17,613 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 17:02:22] 2025-10-12 21:01:17,613 | INFO     | ***************************************
[2025-10-12 17:02:22] 2025-10-12 21:01:17,613 | INFO     | 
[2025-10-12 17:02:22] 2025-10-12 21:01:17,631 | INFO     | architecture information:
[2025-10-12 17:02:22] 2025-10-12 21:01:17,631 | INFO     | executing command: cat /etc/os-release
[2025-10-12 17:02:22] 2025-10-12 21:01:17,697 | INFO     | cat /etc/os-release:
[2025-10-12 17:02:22] NAME="CentOS Linux"
[2025-10-12 17:02:22] VERSION="7 (Core)"
[2025-10-12 17:02:22] ID="centos"
[2025-10-12 17:02:22] ID_LIKE="rhel fedora"
[2025-10-12 17:02:22] VERSION_ID="7"
[2025-10-12 17:02:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 17:02:22] ANSI_COLOR="0;31"
[2025-10-12 17:02:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 17:02:22] HOME_URL="https://www.centos.org/"
[2025-10-12 17:02:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 17:02:22] 
[2025-10-12 17:02:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 17:02:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 17:02:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 17:02:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 17:02:22] 
[2025-10-12 17:02:22] 2025-10-12 21:01:17,698 | INFO     | ***************************************
[2025-10-12 17:02:22] 2025-10-12 21:01:18,202 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 17:02:22] 2025-10-12 21:01:18,554 | INFO     | sufficient remaining disk space (75848744960 B)
[2025-10-12 17:02:22] 2025-10-12 21:01:18,555 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 17:02:22] 2025-10-12 21:01:18,555 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 17:02:22] 2025-10-12 21:01:18,555 | INFO     | update_server=False
[2025-10-12 17:02:22] 2025-10-12 21:01:18,555 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 17:02:22] 2025-10-12 21:01:18,556 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 17:02:22] 2025-10-12 21:01:18,556 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:02:22] 2025-10-12 21:01:18,556 | INFO     | aborting loop
[2025-10-12 17:02:22] 2025-10-12 21:01:18,623 | INFO     | all job control threads have been joined
[2025-10-12 17:02:22] 2025-10-12 21:01:18,734 | INFO     | all payload control threads have been joined
[2025-10-12 17:02:22] 2025-10-12 21:01:19,061 | INFO     | all data control threads have been joined
[2025-10-12 17:02:22] 2025-10-12 21:01:19,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 17:02:22] 2025-10-12 21:01:19,569 | INFO     | [job] job monitor thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:19,587 | INFO     | [job] retrieve thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:19,629 | INFO     | [job] control thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:19,791 | INFO     | [payload] control thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:19,807 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 17:02:22] 2025-10-12 21:01:19,959 | INFO     | [data] copytool_in thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:20,067 | INFO     | [data] control thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:20,097 | INFO     | [job] queue monitor thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:20,345 | INFO     | [payload] failed_post thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:20,412 | INFO     | [job] validate thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:20,575 | INFO     | [data] copytool_out thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:20,635 | INFO     | [payload] validate_post thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:20,650 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:21,053 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:21,054 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:21,062 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:23,884 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 17:02:22] 2025-10-12 21:01:47,428 | INFO     | PID=601494 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 17:02:22] 2025-10-12 21:01:47,428 | INFO     | .. there are 26 such processes running
[2025-10-12 17:02:22] 2025-10-12 21:01:47,428 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 17:02:22] 2025-10-12 21:01:47,428 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 17:02:22] 2025-10-12 21:01:47,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 17:02:22] 2025-10-12 21:02:13,101 | INFO     | [monitor] cgroup control has ended
[2025-10-12 17:02:22] 2025-10-12 21:02:15,143 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139789699888960)>', '<ExcThread(monitor, started 139788745164544)>']
[2025-10-12 17:02:22] 2025-10-12 21:02:15,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 17:02:22] 2025-10-12 21:02:15,845 | INFO     | [monitor] control thread has ended
[2025-10-12 17:02:22] 2025-10-12 21:02:20,177 | INFO     | all workflow threads have been joined
[2025-10-12 17:02:22] 2025-10-12 21:02:20,177 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 17:02:22] 2025-10-12 21:02:20,178 | INFO     | traces error code: 0
[2025-10-12 17:02:22] 2025-10-12 21:02:20,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 17:02:22] 2025-10-12 21:02:21,573 [wrapper] ==== pilot stdout END ====
[2025-10-12 17:02:22] 2025-10-12 21:02:21,635 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 17:02:22] 2025-10-12 21:02:21,697 [wrapper] pilotpid: 601494
[2025-10-12 17:02:22] 2025-10-12 21:02:21,738 [wrapper] Pilot exit status: 0
[2025-10-12 17:02:22] 2025-10-12 21:02:21,926 [wrapper] pandaids: 6839083871
[2025-10-12 17:02:22] 2025-10-12 21:02:22,300 [wrapper] cleanup supervisor_pilot 3667878 601495
[2025-10-12 17:02:22] 2025-10-12 21:02:22,309 [wrapper] Test setup, not cleaning
[2025-10-12 17:02:22] 2025-10-12 21:02:22,312 [wrapper] apfmon messages muted
[2025-10-12 17:02:22] 2025-10-12 21:02:22,315 [wrapper] ==== wrapper stdout END ====
[2025-10-12 17:02:22] 2025-10-12 21:02:22,320 [wrapper] ==== wrapper stderr END ====
[2025-10-12 17:02:22]  *** Error codes and diagnostics ***
[2025-10-12 17:02:22]     "exeErrorCode": 0,
[2025-10-12 17:02:22]     "exeErrorDiag": "",
[2025-10-12 17:02:22]     "pilotErrorCode": 0,
[2025-10-12 17:02:22]     "pilotErrorDiag": "",
[2025-10-12 17:02:22]  *** Listing of results directory ***
[2025-10-12 17:02:22] total 430028
[2025-10-12 17:02:22] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-12 17:02:22] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 19:05 queuedata.json
[2025-10-12 17:02:22] -rwx------. 1 boincer umatlas     36292 Oct 11 19:06 runpilot2-wrapper.sh
[2025-10-12 17:02:22] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 17:02:22] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:03 run_atlas
[2025-10-12 17:02:22] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:03 job.xml
[2025-10-12 17:02:22] -rw-r--r--. 2 boincer umatlas 222233762 Oct 12 00:03 EVNT.46676267._002686.pool.root.1
[2025-10-12 17:02:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 17:02:22] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:03 shared
[2025-10-12 17:02:22] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 00:03 input.tar.gz
[2025-10-12 17:02:22] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:03 boinc_lockfile
[2025-10-12 17:02:22] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:03 pandaJob.out
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas    975512 Oct 12 00:04 agis_schedconf.cvmfs.json
[2025-10-12 17:02:22] drwx------. 5 boincer umatlas      4096 Oct 12 00:04 pilot3
[2025-10-12 17:02:22] -rw-r--r--. 1 boincer umatlas      6657 Oct 12 16:55 init_data.xml
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas 197298463 Oct 12 16:59 HITS.46676269._066635.pool.root.1
[2025-10-12 17:02:22] -rw-r--r--. 1 boincer umatlas       531 Oct 12 16:59 boinc_task_state.xml
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas      1054 Oct 12 17:00 memory_monitor_summary.json
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas   1560580 Oct 12 17:00 agis_ddmendpoints.agis.ALL.json
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas   1080935 Oct 12 17:00 log.46676269._066635.job.log.tgz.1
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas        95 Oct 12 17:00 pilot_heartbeat.json
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas      7847 Oct 12 17:01 heartbeat.json
[2025-10-12 17:02:22] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 17:02 boinc_mmap_file
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas      4823 Oct 12 17:02 pilotlog.txt
[2025-10-12 17:02:22] -rw-r--r--. 1 boincer umatlas        28 Oct 12 17:02 wrapper_checkpoint.txt
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas   7374795 Oct 12 17:02 log.46676269._066635.job.log.1
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas       357 Oct 12 17:02 output.list
[2025-10-12 17:02:22] -rw-r--r--. 1 boincer umatlas       620 Oct 12 17:02 runtime_log
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas   8478720 Oct 12 17:02 result.tar.gz
[2025-10-12 17:02:22] -rw-r--r--. 1 boincer umatlas      8694 Oct 12 17:02 runtime_log.err
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas       658 Oct 12 17:02 pYyNDmIqxR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmPlSMDmQVOSYo.diag
[2025-10-12 17:02:22] -rw-r--r--. 1 boincer umatlas     21234 Oct 12 17:02 stderr.txt
[2025-10-12 17:02:22] HITS file was successfully produced:
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas 197298463 Oct 12 16:59 shared/HITS.pool.root.1
[2025-10-12 17:02:22]  *** Contents of shared directory: ***
[2025-10-12 17:02:22] total 418564
[2025-10-12 17:02:22] -rw-r--r--. 2 boincer umatlas 222233762 Oct 12 00:03 ATLAS.root_0
[2025-10-12 17:02:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 17:02:22] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 00:03 input.tar.gz
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas 197298463 Oct 12 16:59 HITS.pool.root.1
[2025-10-12 17:02:22] -rw-------. 1 boincer umatlas   8478720 Oct 12 17:02 result.tar.gz
17:02:24 (592555): run_atlas exited; CPU time 53864.708987
17:02:24 (592555): called boinc_finish(0)

</stderr_txt>
]]>

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