Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:38:29 (404108): wrapper (7.7.26015): starting
21:38:29 (404108): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 21:38:29] Arguments: --nthreads 8
[2025-10-11 21:38:29] Threads: 8
[2025-10-11 21:38:29] Checking for CVMFS
[2025-10-11 21:38:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 21:38:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 21:38:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 21:38:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 21:38:30] 2.13.2.0 5060 5030 123628 151602 3 624 23422777 40960001 22785 16776704 0 16201250 99.842 6081097 35600 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 21:38:30] CVMFS is ok
[2025-10-11 21:38:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 21:38:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 21:38:30] Further information can be found at the LHC@home message board.
[2025-10-11 21:38:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 21:38:30] Checking for apptainer binary...
[2025-10-11 21:38:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 21:38:30] Running /usr/bin/apptainer --version
[2025-10-11 21:38:30] apptainer version 1.4.3-1.el9
[2025-10-11 21:38:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 21:38:30] c-212-3.aglt2.org
[2025-10-11 21:38:30] apptainer works
[2025-10-11 21:38:30] Set ATHENA_PROC_NUMBER=8
[2025-10-11 21:38:30] Set ATHENA_CORE_NUMBER=8
[2025-10-11 21:38:30] Starting ATLAS job with PandaID=6839083878
[2025-10-11 21:38:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:32:16]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:32:16] 2025-10-12 03:31:23,511 | INFO     | time since job start (6748s) is within the limit (172800.0s)
[2025-10-11 23:32:16] 2025-10-12 03:31:24,919 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 23:32:16] 2025-10-12 03:31:24,926 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2993.885239583331
[2025-10-11 23:32:16] 2025-10-12 03:31:24,977 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6839083878/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 23:32:16] 2025-10-12 03:31:24,987 | INFO     | extracted standard info from prmon json
[2025-10-11 23:32:16] 2025-10-12 03:31:24,987 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 23:32:16] 2025-10-12 03:31:24,987 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 23:32:16] 2025-10-12 03:31:24,988 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 23:32:16] 2025-10-12 03:31:24,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 23:32:16] 2025-10-12 03:31:24,990 | INFO     | fitting pss+swap vs Time
[2025-10-11 23:32:16] 2025-10-12 03:31:24,999 | INFO     | sum of square deviations: 412686809.46363544
[2025-10-11 23:32:16] 2025-10-12 03:31:24,999 | INFO     | sum of deviations: 22154457824.745472
[2025-10-11 23:32:16] 2025-10-12 03:31:24,999 | INFO     | mean x: 1760236499.5181818
[2025-10-11 23:32:16] 2025-10-12 03:31:24,999 | INFO     | mean y: 2409066.1272727274
[2025-10-11 23:32:16] 2025-10-12 03:31:24,999 | INFO     | -- intersect: -94493185161.45963
[2025-10-11 23:32:16] 2025-10-12 03:31:25,000 | INFO     | intersect: -94493185161.45963
[2025-10-11 23:32:16] 2025-10-12 03:31:25,000 | INFO     | chi2: 3.39696789942772
[2025-10-11 23:32:16] 2025-10-12 03:31:25,000 | INFO     | sum of square deviations: 358928271.9619045
[2025-10-11 23:32:16] 2025-10-12 03:31:25,000 | INFO     | sum of deviations: 27825088029.257133
[2025-10-11 23:32:16] 2025-10-12 03:31:25,000 | INFO     | mean x: 1760236347.0190477
[2025-10-11 23:32:16] 2025-10-12 03:31:25,001 | INFO     | mean y: 2424441.3714285716
[2025-10-11 23:32:16] 2025-10-12 03:31:25,001 | INFO     | -- intersect: -136455846288.83577
[2025-10-11 23:32:16] 2025-10-12 03:31:25,001 | INFO     | intersect: -136455846288.83577
[2025-10-11 23:32:16] 2025-10-12 03:31:25,001 | INFO     | chi2: 2.7303117770709306
[2025-10-11 23:32:16] 2025-10-12 03:31:25,001 | INFO     | current chi2=2.7303117770709306 (change=19.625034504126443 %)
[2025-10-11 23:32:16] 2025-10-12 03:31:25,001 | INFO     | right removable region: 104
[2025-10-11 23:32:16] 2025-10-12 03:31:25,001 | INFO     | sum of square deviations: 358927051.9619045
[2025-10-11 23:32:16] 2025-10-12 03:31:25,002 | INFO     | sum of deviations: -3510395500.8952355
[2025-10-11 23:32:16] 2025-10-12 03:31:25,002 | INFO     | mean x: 1760236652.0190477
[2025-10-11 23:32:16] 2025-10-12 03:31:25,010 | INFO     | mean y: 2481150.4476190475
[2025-10-11 23:32:16] 2025-10-12 03:31:25,010 | INFO     | -- intersect: 17218031747.660316
[2025-10-11 23:32:16] 2025-10-12 03:31:25,011 | INFO     | intersect: 17218031747.660316
[2025-10-11 23:32:16] 2025-10-12 03:31:25,011 | INFO     | chi2: 0.8990863910624082
[2025-10-11 23:32:16] 2025-10-12 03:31:25,011 | INFO     | current chi2=0.8990863910624082 (change=73.53267921036652 %)
[2025-10-11 23:32:16] 2025-10-12 03:31:25,011 | INFO     | sum of square deviations: 310051106.9600007
[2025-10-11 23:32:16] 2025-10-12 03:31:25,012 | INFO     | sum of deviations: -9216431651.44
[2025-10-11 23:32:16] 2025-10-12 03:31:25,012 | INFO     | mean x: 1760236804.52
[2025-10-11 23:32:16] 2025-10-12 03:31:25,012 | INFO     | mean y: 2498771.47
[2025-10-11 23:32:16] 2025-10-12 03:31:25,012 | INFO     | -- intersect: 52326460321.78517
[2025-10-11 23:32:16] 2025-10-12 03:31:25,012 | INFO     | intersect: 52326460321.78517
[2025-10-11 23:32:16] 2025-10-12 03:31:25,012 | INFO     | chi2: 0.7603196511799177
[2025-10-11 23:32:16] 2025-10-12 03:31:25,012 | INFO     | current chi2=0.7603196511799177 (change=15.434194228934587 %)
[2025-10-11 23:32:16] 2025-10-12 03:31:25,012 | INFO     | left removable region: 20
[2025-10-11 23:32:16] 2025-10-12 03:31:25,013 | INFO     | sum of square deviations: 183759878.95238084
[2025-10-11 23:32:16] 2025-10-12 03:31:25,013 | INFO     | sum of deviations: -1495887602.666667
[2025-10-11 23:32:16] 2025-10-12 03:31:25,013 | INFO     | mean x: 1760236926.5238094
[2025-10-11 23:32:16] 2025-10-12 03:31:25,013 | INFO     | mean y: 2515290.8333333335
[2025-10-11 23:32:16] 2025-10-12 03:31:25,013 | INFO     | -- intersect: 14331631152.002268
[2025-10-11 23:32:16] 2025-10-12 03:31:25,013 | INFO     | intersect: 14331631152.002268
[2025-10-11 23:32:16] 2025-10-12 03:31:25,013 | INFO     | chi2: 0.02664296990060792
[2025-10-11 23:32:16] 2025-10-12 03:31:25,013 | INFO     | -- intersect: 14331631152.002268
[2025-10-11 23:32:16] 2025-10-12 03:31:25,014 | INFO     | current memory leak: -8.14 B/s (using 84 data points, chi2=0.03)
[2025-10-11 23:32:16] 2025-10-12 03:31:25,022 | INFO     | could have reported an average CPU frequency of 3035 MHz (7 samples)
[2025-10-11 23:32:16] 2025-10-12 03:31:25,023 | INFO     | ..............................
[2025-10-11 23:32:16] 2025-10-12 03:31:25,023 | INFO     | . Timing measurements:
[2025-10-11 23:32:16] 2025-10-12 03:31:25,023 | INFO     | . get job = 0 s
[2025-10-11 23:32:16] 2025-10-12 03:31:25,023 | INFO     | . initial setup = 3 s
[2025-10-11 23:32:16] 2025-10-12 03:31:25,023 | INFO     | . payload setup = 11 s
[2025-10-11 23:32:16] 2025-10-12 03:31:25,023 | INFO     | . stage-in = 0 s
[2025-10-11 23:32:16] 2025-10-12 03:31:25,023 | INFO     | . payload execution = 6699 s
[2025-10-11 23:32:16] 2025-10-12 03:31:25,023 | INFO     | . stage-out = 1 s
[2025-10-11 23:32:16] 2025-10-12 03:31:25,023 | INFO     | . log creation = 0 s
[2025-10-11 23:32:16] 2025-10-12 03:31:25,023 | INFO     | ..............................
[2025-10-11 23:32:16] 2025-10-12 03:31:25,488 | INFO     | 
[2025-10-11 23:32:16] 2025-10-12 03:31:25,488 | INFO     | job summary report
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | --------------------------------------------------
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | PanDA job id: 6839083878
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | task id: 46676269
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | errors: (none)
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | pilot state: finished 
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | transexitcode: 0
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | exeerrorcode: 0
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | exeerrordiag: 
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | exitcode: 0
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | exitmsg: OK
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | cpuconsumptiontime: 36519 s
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | nevents: 400
[2025-10-11 23:32:16] 2025-10-12 03:31:25,489 | INFO     | neventsw: 0
[2025-10-11 23:32:16] 2025-10-12 03:31:25,490 | INFO     | pid: 419986
[2025-10-11 23:32:16] 2025-10-12 03:31:25,490 | INFO     | pgrp: 419986
[2025-10-11 23:32:16] 2025-10-12 03:31:25,490 | INFO     | corecount: 8
[2025-10-11 23:32:16] 2025-10-12 03:31:25,490 | INFO     | event service: False
[2025-10-11 23:32:16] 2025-10-12 03:31:25,490 | INFO     | sizes: {0: 2348806, 10: 2349068, 11: 2349096, 6715: 2376126, 6717: 2385124, 6721: 2385180, 6729: 2385502}
[2025-10-11 23:32:16] 2025-10-12 03:31:25,490 | INFO     | --------------------------------------------------
[2025-10-11 23:32:16] 2025-10-12 03:31:25,490 | INFO     | 
[2025-10-11 23:32:16] 2025-10-12 03:31:25,490 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 23:32:16] 2025-10-12 03:31:25,518 | INFO     | time since job start (6750s) is within the limit (172800.0s)
[2025-10-11 23:32:16] 2025-10-12 03:31:25,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,533 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,535 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:32:16] 2025-10-12 03:31:25,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,535 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:32:16] 2025-10-12 03:31:25,535 | INFO     | job 6839083878 has completed (purged errors)
[2025-10-11 23:32:16] 2025-10-12 03:31:25,535 | INFO     | overall cleanup function is called
[2025-10-11 23:32:16] 2025-10-12 03:31:26,545 | INFO     | --- collectZombieJob: --- 10, [419986]
[2025-10-11 23:32:16] 2025-10-12 03:31:26,545 | INFO     | zombie collector waiting for pid 419986
[2025-10-11 23:32:16] 2025-10-12 03:31:26,545 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:32:16] 2025-10-12 03:31:26,545 | INFO     | collected zombie processes
[2025-10-11 23:32:16] 2025-10-12 03:31:26,545 | INFO     | will attempt to kill all subprocesses of pid=419986
[2025-10-11 23:32:16] 2025-10-12 03:31:29,303 | INFO     | process IDs to be killed: [419986] (in reverse order)
[2025-10-11 23:32:16] 2025-10-12 03:31:29,454 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:32:16] 2025-10-12 03:31:29,455 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:32:16] 2025-10-12 03:31:29,471 | INFO     | did not find any defunct processes belonging to 419986
[2025-10-11 23:32:16] 2025-10-12 03:31:29,487 | INFO     | did not find any defunct processes belonging to 419986
[2025-10-11 23:32:16] 2025-10-12 03:31:29,488 | INFO     | ready for new job
[2025-10-11 23:32:16] 2025-10-12 03:31:29,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:32:16] 2025-10-12 03:31:29,491 | INFO     | ***************************************
[2025-10-11 23:32:16] 2025-10-12 03:31:29,491 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:32:16] 2025-10-12 03:31:29,491 | INFO     | ***************************************
[2025-10-11 23:32:16] 2025-10-12 03:31:29,491 | INFO     | 
[2025-10-11 23:32:16] 2025-10-12 03:31:29,538 | INFO     | architecture information:
[2025-10-11 23:32:16] 2025-10-12 03:31:29,568 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:32:16] 2025-10-12 03:31:29,617 | INFO     | cat /etc/os-release:
[2025-10-11 23:32:16] NAME="CentOS Linux"
[2025-10-11 23:32:16] VERSION="7 (Core)"
[2025-10-11 23:32:16] ID="centos"
[2025-10-11 23:32:16] ID_LIKE="rhel fedora"
[2025-10-11 23:32:16] VERSION_ID="7"
[2025-10-11 23:32:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:32:16] ANSI_COLOR="0;31"
[2025-10-11 23:32:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:32:16] HOME_URL="https://www.centos.org/"
[2025-10-11 23:32:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:32:16] 
[2025-10-11 23:32:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:32:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:32:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:32:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:32:16] 
[2025-10-11 23:32:16] 2025-10-12 03:31:29,617 | INFO     | ***************************************
[2025-10-11 23:32:16] 2025-10-12 03:31:30,128 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 23:32:16] 2025-10-12 03:31:30,196 | INFO     | sufficient remaining disk space (127335923712 B)
[2025-10-11 23:32:16] 2025-10-12 03:31:30,197 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:32:16] 2025-10-12 03:31:30,197 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:32:16] 2025-10-12 03:31:30,197 | INFO     | update_server=False
[2025-10-11 23:32:16] 2025-10-12 03:31:30,197 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:32:16] 2025-10-12 03:31:30,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:32:16] 2025-10-12 03:31:30,198 | INFO     | aborting loop
[2025-10-11 23:32:16] 2025-10-12 03:31:30,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:32:16] 2025-10-12 03:31:30,258 | INFO     | all payload control threads have been joined
[2025-10-11 23:32:16] 2025-10-12 03:31:30,902 | INFO     | all data control threads have been joined
[2025-10-11 23:32:16] 2025-10-12 03:31:31,203 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:31,204 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:31,263 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:31,264 | INFO     | [payload] control thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:31,318 | INFO     | all job control threads have been joined
[2025-10-11 23:32:16] 2025-10-12 03:31:31,368 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:32:16] 2025-10-12 03:31:31,566 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:31,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:32:16] 2025-10-12 03:31:31,908 | INFO     | [data] control thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:31,956 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:31,957 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:32,047 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:32,048 | INFO     | [job] validate thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:32,054 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:32,079 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:32,338 | INFO     | [job] control thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:33,375 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:35,915 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:31:40,422 | INFO     | job.realtimelogging is not enabled
[2025-10-11 23:32:16] 2025-10-12 03:31:41,428 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:32:16] 2025-10-12 03:32:00,650 | INFO     | PID=411599 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 23:32:16] 2025-10-12 03:32:00,650 | INFO     | .. there are 23 such processes running
[2025-10-11 23:32:16] 2025-10-12 03:32:00,651 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:32:16] 2025-10-12 03:32:00,651 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:32:16] 2025-10-12 03:32:00,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:32:16] 2025-10-12 03:32:07,020 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:32:16] 2025-10-12 03:32:09,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228280805184)>', '<ExcThread(monitor, started 140227637135104)>']
[2025-10-11 23:32:16] 2025-10-12 03:32:09,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:32:16] 2025-10-12 03:32:09,716 | INFO     | [monitor] control thread has ended
[2025-10-11 23:32:16] 2025-10-12 03:32:14,061 | INFO     | all workflow threads have been joined
[2025-10-11 23:32:16] 2025-10-12 03:32:14,061 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:32:16] 2025-10-12 03:32:14,086 | INFO     | traces error code: 0
[2025-10-11 23:32:16] 2025-10-12 03:32:14,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:32:16] 2025-10-12 03:32:16,307 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:32:16] 2025-10-12 03:32:16,312 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:32:16] 2025-10-12 03:32:16,314 [wrapper] pilotpid: 411599
[2025-10-11 23:32:16] 2025-10-12 03:32:16,317 [wrapper] Pilot exit status: 0
[2025-10-11 23:32:16] 2025-10-12 03:32:16,325 [wrapper] pandaids: 6839083878
[2025-10-11 23:32:16] 2025-10-12 03:32:16,410 [wrapper] cleanup supervisor_pilot  712714 411600
[2025-10-11 23:32:16] 2025-10-12 03:32:16,413 [wrapper] Test setup, not cleaning
[2025-10-11 23:32:16] 2025-10-12 03:32:16,425 [wrapper] apfmon messages muted
[2025-10-11 23:32:16] 2025-10-12 03:32:16,451 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:32:16] 2025-10-12 03:32:16,480 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:32:16]  *** Error codes and diagnostics ***
[2025-10-11 23:32:16]     "exeErrorCode": 0,
[2025-10-11 23:32:16]     "exeErrorDiag": "",
[2025-10-11 23:32:16]     "pilotErrorCode": 0,
[2025-10-11 23:32:16]     "pilotErrorDiag": "",
[2025-10-11 23:32:16]  *** Listing of results directory ***
[2025-10-11 23:32:16] total 411500
[2025-10-11 23:32:16] -rw-r--r--. 1 boincer umatlas    557409 Oct 11 18:51 pilot3.tar.gz
[2025-10-11 23:32:16] -rw-r--r--. 1 boincer umatlas      5112 Oct 11 19:02 queuedata.json
[2025-10-11 23:32:16] -rwx------. 1 boincer umatlas     36292 Oct 11 19:02 runpilot2-wrapper.sh
[2025-10-11 23:32:16] -rw-r--r--. 1 boincer umatlas       100 Oct 11 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:32:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 21:38 run_atlas
[2025-10-11 23:32:16] -rw-r--r--. 1 boincer umatlas       105 Oct 11 21:38 job.xml
[2025-10-11 23:32:16] -rw-r--r--. 2 boincer umatlas 220641972 Oct 11 21:38 EVNT.46676267._002687.pool.root.1
[2025-10-11 23:32:16] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 21:38 input.tar.gz
[2025-10-11 23:32:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:38 start_atlas.sh
[2025-10-11 23:32:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 21:38 shared
[2025-10-11 23:32:16] -rw-r--r--. 1 boincer umatlas         0 Oct 11 21:38 boinc_lockfile
[2025-10-11 23:32:16] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 21:38 pandaJob.out
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas    975496 Oct 11 21:38 agis_schedconf.cvmfs.json
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas   1560580 Oct 11 21:38 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:32:16] drwx------. 5 boincer umatlas      4096 Oct 11 21:38 pilot3
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas 194407544 Oct 11 23:29 HITS.46676269._066642.pool.root.1
[2025-10-11 23:32:16] -rw-r--r--. 1 boincer umatlas       529 Oct 11 23:29 boinc_task_state.xml
[2025-10-11 23:32:16] -rw-r--r--. 1 boincer umatlas      6945 Oct 11 23:30 init_data.xml
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas      1044 Oct 11 23:31 memory_monitor_summary.json
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas    344192 Oct 11 23:31 log.46676269._066642.job.log.tgz.1
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas        95 Oct 11 23:31 pilot_heartbeat.json
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas      7797 Oct 11 23:31 heartbeat.json
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas      4896 Oct 11 23:32 pilotlog.txt
[2025-10-11 23:32:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 23:32 boinc_mmap_file
[2025-10-11 23:32:16] -rw-r--r--. 1 boincer umatlas        27 Oct 11 23:32 wrapper_checkpoint.txt
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas    866786 Oct 11 23:32 log.46676269._066642.job.log.1
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas       357 Oct 11 23:32 output.list
[2025-10-11 23:32:16] -rw-r--r--. 1 boincer umatlas       620 Oct 11 23:32 runtime_log
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas   1228800 Oct 11 23:32 result.tar.gz
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas       654 Oct 11 23:32 XaFKDmGnxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzthNDmj4p3jm.diag
[2025-10-11 23:32:16] -rw-r--r--. 1 boincer umatlas      8698 Oct 11 23:32 runtime_log.err
[2025-10-11 23:32:16] -rw-r--r--. 1 boincer umatlas     20875 Oct 11 23:32 stderr.txt
[2025-10-11 23:32:16] HITS file was successfully produced:
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas 194407544 Oct 11 23:29 shared/HITS.pool.root.1
[2025-10-11 23:32:16]  *** Contents of shared directory: ***
[2025-10-11 23:32:16] total 407108
[2025-10-11 23:32:16] -rw-r--r--. 2 boincer umatlas 220641972 Oct 11 21:38 ATLAS.root_0
[2025-10-11 23:32:16] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 21:38 input.tar.gz
[2025-10-11 23:32:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 21:38 start_atlas.sh
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas 194407544 Oct 11 23:29 HITS.pool.root.1
[2025-10-11 23:32:16] -rw-------. 1 boincer umatlas   1228800 Oct 11 23:32 result.tar.gz
23:32:18 (404108): run_atlas exited; CPU time 36654.050738
23:32:18 (404108): called boinc_finish(0)

</stderr_txt>
]]>

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