Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:13:59 (2532155): wrapper (7.7.26015): starting
18:13:59 (2532155): wrapper: running run_atlas (--nthreads 3)
[2025-10-12 18:13:59] Arguments: --nthreads 3
[2025-10-12 18:13:59] Threads: 3
[2025-10-12 18:13:59] Checking for CVMFS
[2025-10-12 18:13:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:13:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:13:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:13:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:13:59] 2.9.2.0 1182477 4652 82008 151625 2 57 3753201 36864001 0 130560 0 3553235 99.991 158788 919 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-12 18:13:59] CVMFS is ok
[2025-10-12 18:13:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 18:13:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 18:13:59] Further information can be found at the LHC@home message board.
[2025-10-12 18:13:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:13:59] Checking for apptainer binary...
[2025-10-12 18:13:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 18:13:59] Running /usr/bin/apptainer --version
[2025-10-12 18:13:59] apptainer version 1.4.1-1.1
[2025-10-12 18:13:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:13:59] thA332
[2025-10-12 18:13:59] apptainer works
[2025-10-12 18:13:59] Set ATHENA_PROC_NUMBER=3
[2025-10-12 18:13:59] Set ATHENA_CORE_NUMBER=3
[2025-10-12 18:13:59] Starting ATLAS job with PandaID=6838852451
[2025-10-12 18:13:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:36:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:36:31] 2025-10-12 17:36:00,440 | INFO     | cat /etc/os-release:
[2025-10-12 19:36:31] NAME="CentOS Linux"
[2025-10-12 19:36:31] VERSION="7 (Core)"
[2025-10-12 19:36:31] ID="centos"
[2025-10-12 19:36:31] ID_LIKE="rhel fedora"
[2025-10-12 19:36:31] VERSION_ID="7"
[2025-10-12 19:36:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:36:31] ANSI_COLOR="0;31"
[2025-10-12 19:36:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:36:31] HOME_URL="https://www.centos.org/"
[2025-10-12 19:36:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:36:31] 
[2025-10-12 19:36:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:36:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:36:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:36:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:36:31] 
[2025-10-12 19:36:31] 2025-10-12 17:36:00,440 | INFO     | ***************************************
[2025-10-12 19:36:31] 2025-10-12 17:36:00,943 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-12 19:36:31] 2025-10-12 17:36:00,956 | INFO     | sufficient remaining disk space (255735103488 B)
[2025-10-12 19:36:31] 2025-10-12 17:36:00,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:36:31] 2025-10-12 17:36:00,956 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:36:31] 2025-10-12 17:36:00,956 | INFO     | update_server=False
[2025-10-12 19:36:31] 2025-10-12 17:36:00,956 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:36:31] 2025-10-12 17:36:00,956 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:36:31] 2025-10-12 17:36:00,957 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:36:31] 2025-10-12 17:36:00,957 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:36:31] 2025-10-12 17:36:00,957 | INFO     | aborting loop
[2025-10-12 19:36:31] 2025-10-12 17:36:01,114 | INFO     | all payload control threads have been joined
[2025-10-12 19:36:31] 2025-10-12 17:36:01,792 | INFO     | all data control threads have been joined
[2025-10-12 19:36:31] 2025-10-12 17:36:01,820 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:36:31] 2025-10-12 17:36:01,962 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:01,962 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:01,963 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:01,995 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:02,120 | INFO     | [payload] control thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:02,369 | INFO     | all job control threads have been joined
[2025-10-12 19:36:31] 2025-10-12 17:36:02,647 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:02,675 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:02,798 | INFO     | [data] control thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:02,823 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:02,962 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:03,195 | INFO     | [job] validate thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:03,262 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:03,263 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:03,375 | INFO     | [job] control thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:05,826 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:11,320 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:36:31] 2025-10-12 17:36:11,606 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:36:31] 2025-10-12 17:36:12,612 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:36:31] 2025-10-12 17:36:12,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671876548416)>', '<ExcThread(monitor, started 139671254329088)>']
[2025-10-12 19:36:31] 2025-10-12 17:36:17,809 | INFO     | all workflow threads have been joined
[2025-10-12 19:36:31] 2025-10-12 17:36:17,810 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:36:31] 2025-10-12 17:36:17,810 | INFO     | traces error code: 0
[2025-10-12 19:36:31] 2025-10-12 17:36:17,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:36:31] 2025-10-12 17:36:31,862 | INFO     | PID=2535873 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:36:31] 2025-10-12 17:36:31,862 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:36:31] 2025-10-12 17:36:31,862 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:36:31] 2025-10-12 17:36:31,862 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:36:31] 2025-10-12 17:36:31,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:36:31] 2025-10-12 17:36:31,863 | INFO     | [monitor] control thread has ended
[2025-10-12 19:36:31] 2025-10-12 17:36:31,909 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:36:31] 2025-10-12 17:36:31,911 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:36:31] 2025-10-12 17:36:31,914 [wrapper] pilotpid: 2535873
[2025-10-12 19:36:31] 2025-10-12 17:36:31,916 [wrapper] Pilot exit status: 0
[2025-10-12 19:36:31] 2025-10-12 17:36:31,923 [wrapper] pandaids: 6838852451
[2025-10-12 19:36:31] 2025-10-12 17:36:31,939 [wrapper] cleanup supervisor_pilot 2554465 2535874
[2025-10-12 19:36:31] 2025-10-12 17:36:31,941 [wrapper] Test setup, not cleaning
[2025-10-12 19:36:31] 2025-10-12 17:36:31,943 [wrapper] apfmon messages muted
[2025-10-12 19:36:31] 2025-10-12 17:36:31,946 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:36:31] 2025-10-12 17:36:31,948 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:36:31]  *** Error codes and diagnostics ***
[2025-10-12 19:36:31]     "exeErrorCode": 0,
[2025-10-12 19:36:31]     "exeErrorDiag": "",
[2025-10-12 19:36:31]     "pilotErrorCode": 0,
[2025-10-12 19:36:31]     "pilotErrorDiag": "",
[2025-10-12 19:36:31]  *** Listing of results directory ***
[2025-10-12 19:36:31] total 407240
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc    557409 Oct 11 22:21 pilot3.tar.gz
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc      5112 Oct 11 22:25 queuedata.json
[2025-10-12 19:36:31] -rwx------ 1 boinc boinc     36292 Oct 11 22:27 runpilot2-wrapper.sh
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc       100 Oct 12 18:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:36:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 18:13 run_atlas
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc       105 Oct 12 18:13 job.xml
[2025-10-12 19:36:31] -rw-r--r-- 2 boinc boinc 219699973 Oct 12 18:13 EVNT.46676267._002582.pool.root.1
[2025-10-12 19:36:31] -rw-r--r-- 2 boinc boinc    569679 Oct 12 18:13 input.tar.gz
[2025-10-12 19:36:31] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:13 start_atlas.sh
[2025-10-12 19:36:31] drwxrwx--x 2 boinc boinc      4096 Oct 12 18:13 shared
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:13 boinc_setup_complete
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc      6437 Oct 12 18:13 init_data.xml
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc         0 Oct 12 18:13 boinc_lockfile
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc      2547 Oct 12 18:13 pandaJob.out
[2025-10-12 19:36:31] -rw------- 1 boinc boinc    975528 Oct 12 18:14 agis_schedconf.cvmfs.json
[2025-10-12 19:36:31] -rw------- 1 boinc boinc   1560580 Oct 12 18:14 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:36:31] drwx------ 5 boinc boinc      4096 Oct 12 18:14 pilot3
[2025-10-12 19:36:31] -rw------- 1 boinc boinc 191496369 Oct 12 19:35 HITS.46676269._064233.pool.root.1
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc       529 Oct 12 19:35 boinc_task_state.xml
[2025-10-12 19:36:31] -rw------- 1 boinc boinc      1018 Oct 12 19:35 memory_monitor_summary.json
[2025-10-12 19:36:31] -rw------- 1 boinc boinc    237768 Oct 12 19:35 log.46676269._064233.job.log.tgz.1
[2025-10-12 19:36:31] -rw------- 1 boinc boinc      7775 Oct 12 19:35 heartbeat.json
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc      8192 Oct 12 19:36 boinc_mmap_file
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc        27 Oct 12 19:36 wrapper_checkpoint.txt
[2025-10-12 19:36:31] -rw------- 1 boinc boinc       747 Oct 12 19:36 pilotlog.txt
[2025-10-12 19:36:31] -rw------- 1 boinc boinc        95 Oct 12 19:36 pilot_heartbeat.json
[2025-10-12 19:36:31] -rw------- 1 boinc boinc    722261 Oct 12 19:36 log.46676269._064233.job.log.1
[2025-10-12 19:36:31] -rw------- 1 boinc boinc       357 Oct 12 19:36 output.list
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc       620 Oct 12 19:36 runtime_log
[2025-10-12 19:36:31] -rw------- 1 boinc boinc    983040 Oct 12 19:36 result.tar.gz
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc      8777 Oct 12 19:36 runtime_log.err
[2025-10-12 19:36:31] -rw------- 1 boinc boinc       658 Oct 12 19:36 niIODmnMvR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9VhNDmdhuUSo.diag
[2025-10-12 19:36:31] -rw-r--r-- 1 boinc boinc      8879 Oct 12 19:36 stderr.txt
[2025-10-12 19:36:31] HITS file was successfully produced:
[2025-10-12 19:36:31] -rw------- 1 boinc boinc 191496369 Oct 12 19:35 shared/HITS.pool.root.1
[2025-10-12 19:36:31]  *** Contents of shared directory: ***
[2025-10-12 19:36:32] total 403108
[2025-10-12 19:36:32] -rw-r--r-- 2 boinc boinc 219699973 Oct 12 18:13 ATLAS.root_0
[2025-10-12 19:36:32] -rw-r--r-- 2 boinc boinc    569679 Oct 12 18:13 input.tar.gz
[2025-10-12 19:36:32] -rw-r--r-- 2 boinc boinc     15120 Oct 12 18:13 start_atlas.sh
[2025-10-12 19:36:32] -rw------- 1 boinc boinc 191496369 Oct 12 19:35 HITS.pool.root.1
[2025-10-12 19:36:32] -rw------- 1 boinc boinc    983040 Oct 12 19:36 result.tar.gz
19:36:33 (2532155): run_atlas exited; CPU time 14052.739057
19:36:33 (2532155): called boinc_finish(0)

</stderr_txt>
]]>

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